Click here to switch to the map view.

The map label for this gene is 120612573

Identifier: 120612573

GI number: 120612573

Start: 4360643

End: 4361098

Strand: Direct

Name: 120612573

Synonym: Aave_3934

Alternate gene names: NA

Gene position: 4360643-4361098 (Clockwise)

Preceding gene: 120612572

Following gene: 120612574

Centisome position: 81.47

GC content: 69.96

Gene sequence:

>456_bases
ATGCTGCGCATGTCCGATCCCCACATGGATGTCCGTGAACTGGCGCTGGCGATCTTCGCGGCGAACGGCCGCCTGCTGAA
TGCGGGCAACGAACTCGTGGCCCACCTGGGCCTGACCAGCGCCTGGTGGCAGGTGCTTGCCGCCCTGCGGTATTCGGCGG
GTCCGCTGGCCGTCGCATCCATCGCGCGCAACATGGGGCTGACCCGCCAGGCGGTGCAACGCATCGTCGATCTGCTGGCT
GGGCAGGGGCTGGTCGAGTTCCAGCCCAATCCCCATCACCGCCGCGCAAAGCTCGTCGTGCTGACGCGCGCCGGCCTGGA
TGCCGTGACCCGCGCCGAGCGCGCCGTGGCGCCGATCGATCAGGCCATCGCCGAGCGGATCGGCACGGCCCGCATCCGTG
GCGCCATCGCCACCCTCCACGCGATGGTGGAGGTGATCTCGGAGCAGCTCGGCTAG

Upstream 100 bases:

>100_bases
CCCCTGTACTACCCCCGGCACTCCACGGCAGTGGATCGCGGCACCGGCCTACATCGGCACCTTCCCGTTCTTATTGACAA
CATATTGTCAATGTAGAAAT

Downstream 100 bases:

>100_bases
CCGGTGCCACACCCGTTTTCCCACTTGGAAGGAACCCTTGACATGATCCTGGTTTGTGGAGCCACCGGCGGCATCGGCGG
TGAATTGTGCAAGCTGCTGA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; MarR-Family Transcriptional Regulator; Transcription Regulator Protein; Regulatory Protein MarR; Transcriptional Regulator; MarR Family Transcriptional Regulatory Protein; Transcriptional Regulator Protein; MarR Family Regulatory Helix-Turn-Helix

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MLRMSDPHMDVRELALAIFAANGRLLNAGNELVAHLGLTSAWWQVLAALRYSAGPLAVASIARNMGLTRQAVQRIVDLLA
GQGLVEFQPNPHHRRAKLVVLTRAGLDAVTRAERAVAPIDQAIAERIGTARIRGAIATLHAMVEVISEQLG

Sequences:

>Translated_151_residues
MLRMSDPHMDVRELALAIFAANGRLLNAGNELVAHLGLTSAWWQVLAALRYSAGPLAVASIARNMGLTRQAVQRIVDLLA
GQGLVEFQPNPHHRRAKLVVLTRAGLDAVTRAERAVAPIDQAIAERIGTARIRGAIATLHAMVEVISEQLG
>Mature_151_residues
MLRMSDPHMDVRELALAIFAANGRLLNAGNELVAHLGLTSAWWQVLAALRYSAGPLAVASIARNMGLTRQAVQRIVDLLA
GQGLVEFQPNPHHRRAKLVVLTRAGLDAVTRAERAVAPIDQAIAERIGTARIRGAIATLHAMVEVISEQLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16252; Mature: 16252

Theoretical pI: Translated: 11.45; Mature: 11.45

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRMSDPHMDVRELALAIFAANGRLLNAGNELVAHLGLTSAWWQVLAALRYSAGPLAVAS
CCCCCCCCCCHHHHHHHHHHCCCEEEECHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHH
IARNMGLTRQAVQRIVDLLAGQGLVEFQPNPHHRRAKLVVLTRAGLDAVTRAERAVAPID
HHHHCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHH
QAIAERIGTARIRGAIATLHAMVEVISEQLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLRMSDPHMDVRELALAIFAANGRLLNAGNELVAHLGLTSAWWQVLAALRYSAGPLAVAS
CCCCCCCCCCHHHHHHHHHHCCCEEEECHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHH
IARNMGLTRQAVQRIVDLLAGQGLVEFQPNPHHRRAKLVVLTRAGLDAVTRAERAVAPID
HHHHCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHH
QAIAERIGTARIRGAIATLHAMVEVISEQLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA