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The map label for this gene is 120612522

Identifier: 120612522

GI number: 120612522

Start: 4305986

End: 4306681

Strand: Direct

Name: 120612522

Synonym: Aave_3882

Alternate gene names: NA

Gene position: 4305986-4306681 (Clockwise)

Preceding gene: 120612520

Following gene: 120612523

Centisome position: 80.44

GC content: 64.08

Gene sequence:

>696_bases
ATGCAAGTGAACTTTCTACTATTTCCTGCTTTGACACAACTGGATCTGACGGGCCCGTTCGAAGTACTGGCGCGCGCCCC
CGGTTTCAAGATCGACCTTGTTTCGCCCACCATGGATCCTGTTCGCTCGGATCGGGGCTTGACCCTGGCACCGACAGCCA
CTTTCGACAATGCAGGGCCCTGCGACATCCTCGTGGTGCCAGGCGGACCGGGAACCGATGACGCTCTGGTCGACCCAGCC
TGGGTGGATTTCACCGCCCGGCAGGCCGCGGACGCGAAGTTCATCCTCGGCGTGTGTACTGGTTCGCTGCTGCTGGGCGC
GGCGGGGTTGCTGCGCGGAAAACGTGCTGCATGCCATTGGCAAGCTCGAGCGTTTCTGGTTTCGTTCGGCGCCATTCCCG
ACGAATCCCGCACCTGCATCGACGGAAACATCATCACCTCCGGCGGCGTGACCTCCGGAATCGACATGGCCCTCAGGGCG
GTCTCAGTCATGTTGGACGAGGATGCGGCAAGGCAGATCCAGTTGCAGATCGAATACGATCCCGAGCCGCCTTTCGAGGG
GGGCACACCACGCACCTCGCCCCCGCACATCGTCGAGCGCTGCCTGAAGGCCACGCGCGAGCGTCATGCCCTGCGCAGCC
AGGCGGTGGCGCGGGCTGCAACCGCCATGGGCACCGCGGTTGCATCGGCGGCCTGA

Upstream 100 bases:

>100_bases
AAACACCAGAAACGCCACCCGAATTGGCGCAATGGCTTCCGTTTTTGGCGCACCCAGAACGGACCTCAATTTTAGAGTCT
GGTTTTTAAGGAGCGTCTTC

Downstream 100 bases:

>100_bases
AGCAGGAGCACTACATGCCCTCGCTTCCACGTTCCCTGTTGGTGCTGCTCCTGACCCTCTGGTTCAGCAATTCGCATGCA
GCCTTTCCGGAAAAGCCCGT

Product: ThiJ/PfpI domain-containing protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MQVNFLLFPALTQLDLTGPFEVLARAPGFKIDLVSPTMDPVRSDRGLTLAPTATFDNAGPCDILVVPGGPGTDDALVDPA
WVDFTARQAADAKFILGVCTGSLLLGAAGLLRGKRAACHWQARAFLVSFGAIPDESRTCIDGNIITSGGVTSGIDMALRA
VSVMLDEDAARQIQLQIEYDPEPPFEGGTPRTSPPHIVERCLKATRERHALRSQAVARAATAMGTAVASAA

Sequences:

>Translated_231_residues
MQVNFLLFPALTQLDLTGPFEVLARAPGFKIDLVSPTMDPVRSDRGLTLAPTATFDNAGPCDILVVPGGPGTDDALVDPA
WVDFTARQAADAKFILGVCTGSLLLGAAGLLRGKRAACHWQARAFLVSFGAIPDESRTCIDGNIITSGGVTSGIDMALRA
VSVMLDEDAARQIQLQIEYDPEPPFEGGTPRTSPPHIVERCLKATRERHALRSQAVARAATAMGTAVASAA
>Mature_231_residues
MQVNFLLFPALTQLDLTGPFEVLARAPGFKIDLVSPTMDPVRSDRGLTLAPTATFDNAGPCDILVVPGGPGTDDALVDPA
WVDFTARQAADAKFILGVCTGSLLLGAAGLLRGKRAACHWQARAFLVSFGAIPDESRTCIDGNIITSGGVTSGIDMALRA
VSVMLDEDAARQIQLQIEYDPEPPFEGGTPRTSPPHIVERCLKATRERHALRSQAVARAATAMGTAVASAA

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C56 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 24296; Mature: 24296

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVNFLLFPALTQLDLTGPFEVLARAPGFKIDLVSPTMDPVRSDRGLTLAPTATFDNAGP
CCEEEEEECCHHEECCCCHHHHHHCCCCCEEEEECCCCCHHHCCCCEEEECCCCCCCCCC
CDILVVPGGPGTDDALVDPAWVDFTARQAADAKFILGVCTGSLLLGAAGLLRGKRAACHW
EEEEEECCCCCCCCCCCCCHHHCHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHH
QARAFLVSFGAIPDESRTCIDGNIITSGGVTSGIDMALRAVSVMLDEDAARQIQLQIEYD
HHHEEEEEECCCCCCCCEEECCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEC
PEPPFEGGTPRTSPPHIVERCLKATRERHALRSQAVARAATAMGTAVASAA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQVNFLLFPALTQLDLTGPFEVLARAPGFKIDLVSPTMDPVRSDRGLTLAPTATFDNAGP
CCEEEEEECCHHEECCCCHHHHHHCCCCCEEEEECCCCCHHHCCCCEEEECCCCCCCCCC
CDILVVPGGPGTDDALVDPAWVDFTARQAADAKFILGVCTGSLLLGAAGLLRGKRAACHW
EEEEEECCCCCCCCCCCCCHHHCHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHH
QARAFLVSFGAIPDESRTCIDGNIITSGGVTSGIDMALRAVSVMLDEDAARQIQLQIEYD
HHHEEEEEECCCCCCCCEEECCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEC
PEPPFEGGTPRTSPPHIVERCLKATRERHALRSQAVARAATAMGTAVASAA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8157602 [H]