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The map label for this gene is 120612473

Identifier: 120612473

GI number: 120612473

Start: 4258991

End: 4260247

Strand: Direct

Name: 120612473

Synonym: Aave_3832

Alternate gene names: NA

Gene position: 4258991-4260247 (Clockwise)

Preceding gene: 120612472

Following gene: 120612474

Centisome position: 79.57

GC content: 74.46

Gene sequence:

>1257_bases
ATGGCAGCCGCGCCGTCCCGGATCGCCGCGCAGCGCCCGGCAGGCCTCGTGCTCACGGGCGGCGGCGCGCGCGCGGCCTA
CCAGGTGGGCGTGCTGGAGGCCATTTCCGACCTGCGCAAGGCCTGCGGGGCCGGGCGCGAGCCCAACCCTTTCCCCATCA
TCACCGGCACGTCCGCCGGGGCCATCAATGCCGCCGCCCTGGCCTGCGGGGCGGACCATTTCGACCGCGCCGTGAGGCGC
ATCGCCCACGTATGGAGCGACTTCCACGCCCAGCAGGTGTACCGCGCGGACTCGTTGAGCGTGATGCGCAGCGGGGCACG
CTGGCTCACGCTGCTCTCGCTGGGCTGGGCGCTGGCCCGCTGGCGGCGGATGCGCCCGCGCTCGCTGCTGGACAACGCCC
CCCTGGCGGAACTGCTCTCCCGGCTGGTGCCGCTCTCGCGCCTGCCGCGCCTGATCCGCGCGGGCCACGTGCAGGCGCTG
GCCGTCACGGCATCCAGCTACACCTCGGGCGAGCACATCACCTTCTTCGAGGCCGCCGACCCGCTCGCACCCTGGCAGCG
GCAGCAGCGCCGCGCGGCACGCGGTCGCATCACGCACGACCACCTGCTGGCCTCGTCGGCGATTCCGTTCGTCTTTCCGG
CCACCGCGCTGGAGCTGGACGGGAGGACCCAGTTCTTCGGCGACGGCTCCATGCGCCAGTCCGCCCCGATCGCGCCGGCC
ATCCACCTCGGGGCCGGCCGCGTGCTGGTGATCGGCGCGGGCCGCATGCACGAGCCGGCCGGCGACCTGTCCACGGAGTC
CGTGCCGGCTTACCCGACGCTGGCCCAGGTGGCGGGGCATGCGCTGTCCAACATCTTCCTGGATGCCCTGGCGGTGGACG
TGGAGCGCGCGCAGCGCATCAACCAGACCCTGGCGCTGATTCCGCCCGAGGCGCGGGCACTCAGCCCGCTGCGGCCCCTG
GAGCTGCTGGTGATCGCCCCGTCGCAGCGCCTGGATGCGCTGGCGGCCCGCCACGTGGGCGACCTCCCTGCCCCCATTCG
CACCCTGCTGGGCGCCCTGGGCGTGACCGCCAACGAGCGGGACGTGCGCGGCGCCGCGCTGGCGAGCTACCTGCTGTTCG
AGCCCGGCTACACGCGCGAACTCATGGCGCTCGGCCGGCAGGACGCGCTCGCGCGCCGCGCCGAGATCTGCCGCTTTTTC
GGCTGGCACGACGCGGGCCAGCCGGTCCGGGCACCGGCACGGCAGCCTCTCCGCTGA

Upstream 100 bases:

>100_bases
CGCGCGCAGCCACGGGCTGGACCTCCTGGACGGTCCCGCGCTGGCCACCCTGCTGCTCAAGATCCCGGCCGGCACGGGCC
GCTGAACGGTCGTCCCTCCC

Downstream 100 bases:

>100_bases
AAGCGAAAACGTCCGACACCCAGGGTTTCCACCGATGGCACTGCGGTACCTAGAATGATCCGTCCACAACTTCCGGGGAG
TTCCTGGCGATGGGCATTTT

Product: patatin

Products: NA

Alternate protein names: Patatin Family Protein; Alpha-Beta Hydrolase Family Esterase; Phospholipase Patatin Family; Patatin-Like Phospholipase Family; Patatin Like Phospholipase; Patatin-Like Phospholipase; Patatin Family Phospholipase; Patatin-Like Phospholipase Family Protein; Lipid Acyl Hydrolase; Esterase Of Alpha-Beta Hydrolase Superfamily Protein; Phospholipase Patatin Family Protein; Alpha-Beta Hydrolase Superfamily Protein

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MAAAPSRIAAQRPAGLVLTGGGARAAYQVGVLEAISDLRKACGAGREPNPFPIITGTSAGAINAAALACGADHFDRAVRR
IAHVWSDFHAQQVYRADSLSVMRSGARWLTLLSLGWALARWRRMRPRSLLDNAPLAELLSRLVPLSRLPRLIRAGHVQAL
AVTASSYTSGEHITFFEAADPLAPWQRQQRRAARGRITHDHLLASSAIPFVFPATALELDGRTQFFGDGSMRQSAPIAPA
IHLGAGRVLVIGAGRMHEPAGDLSTESVPAYPTLAQVAGHALSNIFLDALAVDVERAQRINQTLALIPPEARALSPLRPL
ELLVIAPSQRLDALAARHVGDLPAPIRTLLGALGVTANERDVRGAALASYLLFEPGYTRELMALGRQDALARRAEICRFF
GWHDAGQPVRAPARQPLR

Sequences:

>Translated_418_residues
MAAAPSRIAAQRPAGLVLTGGGARAAYQVGVLEAISDLRKACGAGREPNPFPIITGTSAGAINAAALACGADHFDRAVRR
IAHVWSDFHAQQVYRADSLSVMRSGARWLTLLSLGWALARWRRMRPRSLLDNAPLAELLSRLVPLSRLPRLIRAGHVQAL
AVTASSYTSGEHITFFEAADPLAPWQRQQRRAARGRITHDHLLASSAIPFVFPATALELDGRTQFFGDGSMRQSAPIAPA
IHLGAGRVLVIGAGRMHEPAGDLSTESVPAYPTLAQVAGHALSNIFLDALAVDVERAQRINQTLALIPPEARALSPLRPL
ELLVIAPSQRLDALAARHVGDLPAPIRTLLGALGVTANERDVRGAALASYLLFEPGYTRELMALGRQDALARRAEICRFF
GWHDAGQPVRAPARQPLR
>Mature_417_residues
AAAPSRIAAQRPAGLVLTGGGARAAYQVGVLEAISDLRKACGAGREPNPFPIITGTSAGAINAAALACGADHFDRAVRRI
AHVWSDFHAQQVYRADSLSVMRSGARWLTLLSLGWALARWRRMRPRSLLDNAPLAELLSRLVPLSRLPRLIRAGHVQALA
VTASSYTSGEHITFFEAADPLAPWQRQQRRAARGRITHDHLLASSAIPFVFPATALELDGRTQFFGDGSMRQSAPIAPAI
HLGAGRVLVIGAGRMHEPAGDLSTESVPAYPTLAQVAGHALSNIFLDALAVDVERAQRINQTLALIPPEARALSPLRPLE
LLVIAPSQRLDALAARHVGDLPAPIRTLLGALGVTANERDVRGAALASYLLFEPGYTRELMALGRQDALARRAEICRFFG
WHDAGQPVRAPARQPLR

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44892; Mature: 44761

Theoretical pI: Translated: 11.41; Mature: 11.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAAPSRIAAQRPAGLVLTGGGARAAYQVGVLEAISDLRKACGAGREPNPFPIITGTSAG
CCCCCCHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC
AINAAALACGADHFDRAVRRIAHVWSDFHAQQVYRADSLSVMRSGARWLTLLSLGWALAR
CHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
WRRMRPRSLLDNAPLAELLSRLVPLSRLPRLIRAGHVQALAVTASSYTSGEHITFFEAAD
HHHCCCHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEECCCC
PLAPWQRQQRRAARGRITHDHLLASSAIPFVFPATALELDGRTQFFGDGSMRQSAPIAPA
CCCHHHHHHHHHHHCCCCHHHHHHHCCCCCEECCCEEEECCCEEEECCCCCCCCCCCCCE
IHLGAGRVLVIGAGRMHEPAGDLSTESVPAYPTLAQVAGHALSNIFLDALAVDVERAQRI
EEECCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQTLALIPPEARALSPLRPLELLVIAPSQRLDALAARHVGDLPAPIRTLLGALGVTANER
CCCEEECCCCHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCC
DVRGAALASYLLFEPGYTRELMALGRQDALARRAEICRFFGWHDAGQPVRAPARQPLR
HHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AAAPSRIAAQRPAGLVLTGGGARAAYQVGVLEAISDLRKACGAGREPNPFPIITGTSAG
CCCCCHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC
AINAAALACGADHFDRAVRRIAHVWSDFHAQQVYRADSLSVMRSGARWLTLLSLGWALAR
CHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
WRRMRPRSLLDNAPLAELLSRLVPLSRLPRLIRAGHVQALAVTASSYTSGEHITFFEAAD
HHHCCCHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEECCCC
PLAPWQRQQRRAARGRITHDHLLASSAIPFVFPATALELDGRTQFFGDGSMRQSAPIAPA
CCCHHHHHHHHHHHCCCCHHHHHHHCCCCCEECCCEEEECCCEEEECCCCCCCCCCCCCE
IHLGAGRVLVIGAGRMHEPAGDLSTESVPAYPTLAQVAGHALSNIFLDALAVDVERAQRI
EEECCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQTLALIPPEARALSPLRPLELLVIAPSQRLDALAARHVGDLPAPIRTLLGALGVTANER
CCCEEECCCCHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCC
DVRGAALASYLLFEPGYTRELMALGRQDALARRAEICRFFGWHDAGQPVRAPARQPLR
HHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA