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The map label for this gene is amiC [H]

Identifier: 120612457

GI number: 120612457

Start: 4237781

End: 4238965

Strand: Reverse

Name: amiC [H]

Synonym: Aave_3816

Alternate gene names: 120612457

Gene position: 4238965-4237781 (Counterclockwise)

Preceding gene: 120612458

Following gene: 120612456

Centisome position: 79.19

GC content: 67.68

Gene sequence:

>1185_bases
ATGCAACATACCTTACAGGGCCGCCGCGCGCTGCTGCGCGGCATGGCGGCCATACTTGCCTGCGGCACCGCTCCGGCCGC
CGTGCGGGCGGCGGCGCCTTTGAAGATCGGCCTGCTGACTCCCTTCAGCGGACCTCTGGCCCGCGTGGCGGAGGCCAACC
GCAATTGCCTGATGATGGCGGTGGACGAGATCAATGCCGCTGGTGGCCTGCTGGGGCAGGCGCTGCAGATCGTCTCGGAA
GATTCCCAGATGTCCGCCAAGGTGTCCCTGGACAAGGCTCGCAAGCTCCTGGCCGGCGACGGCGTTGCCATGGTCACCGG
CATGGTGCTTCCCTTCGAGCGGGAAGCGGTCCTGCAGGTGGCCTCCCGTTATCGGCGGCTCGTCGTGTATCCCAATTTCG
ACGAGGGCCGCTGCCATCCACTGCTGCTGACCACGGGGCTGGCCAGCAACCAGCGCGTGGTTCCCCTGATCGACTGGGCC
GTCGCGCAGGCAGGCAAGTCCTTCTTCGTCCTGGCGTCGGACATCGGCAGCAACCGGAGCACCCTGCTGCCGCAGATCGA
GGCGGCCATCCAGGCGCGCGGCGGCCGCCTGCTGGGAACACGCTTTTTCCCCTTCGGCACGCGCGACTACGGTCCTGCGC
TGCAGCAGATCCAGGGGCTTGGAGCGGATGTGGTCTGGCACAGCATCGGGGACGACCCGGTCAGCTTCGTCAAGCAGTAC
CGGAGCTTCGGCATGAAGCCGCAGCTCATCACCGACATCGCGCACGAATCGCTGGCCATGAGCACCGAAGGCGCCCTCGC
GGGCACGGTGGGTGTTTCCTCCTATTTCATGGGAGTGGAAAATCCGGAGAACCAGCGGTTCCTGGACACCTATACGCGCC
GGTTCTCCGACGCCACGCCCTTGCGGGTCGGCGGGCACGTGGTGATGCTGCCCCACGGAGAGAGCACCTACGCCGGTGCG
AAGCTGTTCGCGGCCGCCGCGGGCAGGGCCGGCAGCATCGAGGCGGATGCCGTGAAAAAGGCCTTGCCCGGGGTGTCCCT
GCGCATGCCGCGCGGCGCGGTGGGGGTGGATGCGGGAGCATCTCACCTCCAATGCCAGACCATGATCGGCCGCGCCCGCA
AGGATGGCGGCTTCGACCTGCTCGGGGCGGCTCCCTCCATCCAGGCGCAATGCGGAGCAGCATGA

Upstream 100 bases:

>100_bases
AACTTCCTGGCCGTCTAGCCCTTGCTGCGGCGGACATTCCGTTCCCCGGCCATGCCGGGCGGCCTGCCTTTGCCTGGTTT
TTTGACAAAGAGGATCGATG

Downstream 100 bases:

>100_bases
TGAGCGGCGAGATCATCGAACTGACGGCCCATGGGTTGACGAGTGCCTACCGAACCCTGGCGCTTTCTCCGGTGGAAGCC
ATGCGCGCAGTGCTCGACCG

Product: branched chain amino acid ABC transporter periplasmic ligand-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MQHTLQGRRALLRGMAAILACGTAPAAVRAAAPLKIGLLTPFSGPLARVAEANRNCLMMAVDEINAAGGLLGQALQIVSE
DSQMSAKVSLDKARKLLAGDGVAMVTGMVLPFEREAVLQVASRYRRLVVYPNFDEGRCHPLLLTTGLASNQRVVPLIDWA
VAQAGKSFFVLASDIGSNRSTLLPQIEAAIQARGGRLLGTRFFPFGTRDYGPALQQIQGLGADVVWHSIGDDPVSFVKQY
RSFGMKPQLITDIAHESLAMSTEGALAGTVGVSSYFMGVENPENQRFLDTYTRRFSDATPLRVGGHVVMLPHGESTYAGA
KLFAAAAGRAGSIEADAVKKALPGVSLRMPRGAVGVDAGASHLQCQTMIGRARKDGGFDLLGAAPSIQAQCGAA

Sequences:

>Translated_394_residues
MQHTLQGRRALLRGMAAILACGTAPAAVRAAAPLKIGLLTPFSGPLARVAEANRNCLMMAVDEINAAGGLLGQALQIVSE
DSQMSAKVSLDKARKLLAGDGVAMVTGMVLPFEREAVLQVASRYRRLVVYPNFDEGRCHPLLLTTGLASNQRVVPLIDWA
VAQAGKSFFVLASDIGSNRSTLLPQIEAAIQARGGRLLGTRFFPFGTRDYGPALQQIQGLGADVVWHSIGDDPVSFVKQY
RSFGMKPQLITDIAHESLAMSTEGALAGTVGVSSYFMGVENPENQRFLDTYTRRFSDATPLRVGGHVVMLPHGESTYAGA
KLFAAAAGRAGSIEADAVKKALPGVSLRMPRGAVGVDAGASHLQCQTMIGRARKDGGFDLLGAAPSIQAQCGAA
>Mature_394_residues
MQHTLQGRRALLRGMAAILACGTAPAAVRAAAPLKIGLLTPFSGPLARVAEANRNCLMMAVDEINAAGGLLGQALQIVSE
DSQMSAKVSLDKARKLLAGDGVAMVTGMVLPFEREAVLQVASRYRRLVVYPNFDEGRCHPLLLTTGLASNQRVVPLIDWA
VAQAGKSFFVLASDIGSNRSTLLPQIEAAIQARGGRLLGTRFFPFGTRDYGPALQQIQGLGADVVWHSIGDDPVSFVKQY
RSFGMKPQLITDIAHESLAMSTEGALAGTVGVSSYFMGVENPENQRFLDTYTRRFSDATPLRVGGHVVMLPHGESTYAGA
KLFAAAAGRAGSIEADAVKKALPGVSLRMPRGAVGVDAGASHLQCQTMIGRARKDGGFDLLGAAPSIQAQCGAA

Specific function: Negatively regulates the expression of the aliphatic amidase operon. AmiC functions by inhibiting the action of AmiR at the protein level. It exhibits protein kinase activity [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000709 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41513; Mature: 41513

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHTLQGRRALLRGMAAILACGTAPAAVRAAAPLKIGLLTPFSGPLARVAEANRNCLMMA
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEECCCCCHHHHHHHCCCCEEEEE
VDEINAAGGLLGQALQIVSEDSQMSAKVSLDKARKLLAGDGVAMVTGMVLPFEREAVLQV
EEHHCHHHHHHHHHHHHHCCCCHHHHEEEHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHH
ASRYRRLVVYPNFDEGRCHPLLLTTGLASNQRVVPLIDWAVAQAGKSFFVLASDIGSNRS
HHHCCEEEEECCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHCCCEEEEEEECCCCCCC
TLLPQIEAAIQARGGRLLGTRFFPFGTRDYGPALQQIQGLGADVVWHSIGDDPVSFVKQY
HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCEEEECCCCCHHHHHHHH
RSFGMKPQLITDIAHESLAMSTEGALAGTVGVSSYFMGVENPENQRFLDTYTRRFSDATP
HHCCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHEECCCCCCCCHHHHHHHHHHCCCCC
LRVGGHVVMLPHGESTYAGAKLFAAAAGRAGSIEADAVKKALPGVSLRMPRGAVGVDAGA
EEECCEEEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCEEECCCCCCCCCCCC
SHLQCQTMIGRARKDGGFDLLGAAPSIQAQCGAA
CHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MQHTLQGRRALLRGMAAILACGTAPAAVRAAAPLKIGLLTPFSGPLARVAEANRNCLMMA
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEECCCCCHHHHHHHCCCCEEEEE
VDEINAAGGLLGQALQIVSEDSQMSAKVSLDKARKLLAGDGVAMVTGMVLPFEREAVLQV
EEHHCHHHHHHHHHHHHHCCCCHHHHEEEHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHH
ASRYRRLVVYPNFDEGRCHPLLLTTGLASNQRVVPLIDWAVAQAGKSFFVLASDIGSNRS
HHHCCEEEEECCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHCCCEEEEEEECCCCCCC
TLLPQIEAAIQARGGRLLGTRFFPFGTRDYGPALQQIQGLGADVVWHSIGDDPVSFVKQY
HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCEEEECCCCCHHHHHHHH
RSFGMKPQLITDIAHESLAMSTEGALAGTVGVSSYFMGVENPENQRFLDTYTRRFSDATP
HHCCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHEECCCCCCCCHHHHHHHHHHCCCCC
LRVGGHVVMLPHGESTYAGAKLFAAAAGRAGSIEADAVKKALPGVSLRMPRGAVGVDAGA
EEECCEEEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCEEECCCCCCCCCCCC
SHLQCQTMIGRARKDGGFDLLGAAPSIQAQCGAA
CHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1907262; 10984043; 1762155; 7813419; 10508151; 10708652 [H]