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The map label for this gene is 120612438

Identifier: 120612438

GI number: 120612438

Start: 4219756

End: 4220133

Strand: Direct

Name: 120612438

Synonym: Aave_3797

Alternate gene names: NA

Gene position: 4219756-4220133 (Clockwise)

Preceding gene: 120612437

Following gene: 120612439

Centisome position: 78.83

GC content: 71.69

Gene sequence:

>378_bases
GTGAGTGCCAGCACGCTGGAGCGTTGGCGTGCAGATGCGCTGGCCCAGCCCGCGCGCGAGCGCCACTGGACGGCCGCGGC
ACGGCTGGACGCGGTGCTGACGACCGCGGCGATGGACGAGGCGGCCAAGAGCGCCTGGTGCCGCGAGCACGGCGTGTACC
TGCAGGATCTGGCCCATTGGCGCCAAGCGGCCACCGCGGCGCTGGCCGAACCTGAGGAGGCCCGCGCCACGCCGCAGGCC
ACGCGCGCGGACCGTCGGCGCATCAAGGAACTCGAGCGCGACCTGCGTCGCAAGGACCGGGCACTGGCGGAAACCGCGGC
GCTCTTGGTGCTATCAAAAAAGCTCGAGGCGATCTTGCCCGGGGACGAGGACGAATGA

Upstream 100 bases:

>100_bases
CCAGTTGGCACGATACGGACAAGCATTCAAAGACAGAGCGGTGGGCAGGTTGCTGCCACCGCACAGCGCCACGCCCGACG
AGCTGGCGCGTGAGATCGGC

Downstream 100 bases:

>100_bases
TCGGCCTGCAAGATCGCCAGCAACTGGCCCGCGACATCCAGATCGCCCACGACAGCGGCGCGCGGCTGCACCTGGCCTGT
CAGGTCGCCGGTATCGACGT

Product: transposition helper protein

Products: NA

Alternate protein names: Transposase; ISAfe5 Transposase OrfA; Transposase IS3/Family Protein; Transposase IS3 Family

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MSASTLERWRADALAQPARERHWTAAARLDAVLTTAAMDEAAKSAWCREHGVYLQDLAHWRQAATAALAEPEEARATPQA
TRADRRRIKELERDLRRKDRALAETAALLVLSKKLEAILPGDEDE

Sequences:

>Translated_125_residues
MSASTLERWRADALAQPARERHWTAAARLDAVLTTAAMDEAAKSAWCREHGVYLQDLAHWRQAATAALAEPEEARATPQA
TRADRRRIKELERDLRRKDRALAETAALLVLSKKLEAILPGDEDE
>Mature_124_residues
SASTLERWRADALAQPARERHWTAAARLDAVLTTAAMDEAAKSAWCREHGVYLQDLAHWRQAATAALAEPEEARATPQAT
RADRRRIKELERDLRRKDRALAETAALLVLSKKLEAILPGDEDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14012; Mature: 13881

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASTLERWRADALAQPARERHWTAAARLDAVLTTAAMDEAAKSAWCREHGVYLQDLAHW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RQAATAALAEPEEARATPQATRADRRRIKELERDLRRKDRALAETAALLVLSKKLEAILP
HHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GDEDE
CCCCC
>Mature Secondary Structure 
SASTLERWRADALAQPARERHWTAAARLDAVLTTAAMDEAAKSAWCREHGVYLQDLAHW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RQAATAALAEPEEARATPQATRADRRRIKELERDLRRKDRALAETAALLVLSKKLEAILP
HHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GDEDE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA