Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120612422

Identifier: 120612422

GI number: 120612422

Start: 4198881

End: 4199627

Strand: Reverse

Name: 120612422

Synonym: Aave_3780

Alternate gene names: NA

Gene position: 4199627-4198881 (Counterclockwise)

Preceding gene: 120612424

Following gene: 120612421

Centisome position: 78.46

GC content: 70.01

Gene sequence:

>747_bases
ATGCCACGTCTGACACTGCGCGCCTTGTTGCGGACCGCCGCCCTTGCCGCGGCGGCGCTCGCGTGCGTGCCGGGCGGGCC
GGTGTCCGCGGCCGAACAGGACGCAGCGCGGCGCGGAGTGCTCAGCGGCCAGCTCAAGCCCCTCAACAGCATCATCGCGG
ACATCGGCCGCCAGTACGGGGGGCGCGTCATCGAGGTGGAAAGCAAGCGCGGGCGCAAGGGCGAGCTGCGCTACGAGATC
ACGGTCATCGACGCCCGGGGCGAGAAGCACGAGGTGCTGGTGGACGCCGCCTCCGGCGCGGTCGTCGCGCAGGAGCGCGA
ATGGGCGACGCAGCCCGTCCCGCTGGCGCAGATGGCCCGCTACATCCGCCAGCTGGAGCAGAAGTACGGCACGCGCGTGG
TGAATGCCGAGTTCGAGCGCGACGGCCAGGGCAAGGCGGTGTACGAGGTCAAGCTCTCGGAACGGCCTGCCGGCGAAATG
AAGCTGCTGCTGGACGTGCGCACGGGCGAGGTGCTGCATCCCCCCGTGCCCGCCGCCGCGCAGGTCGCGCCGAAATCCAT
GGCCGTGGTGCTCGAGTCGCTGCGGCCGAAATTCTCCGGACTGGTGCTGGAGGTGGAGCTGGAGACCGACCACCGCCGCC
GCCCCTACTACAGTGTCGAACTGCAGCAGCCCAACGGCTTCAAGCTGGAACTGGAAGTGGATGCCGCCACCCTGGAGGTG
ACGCGGCAGAAGGTGGACGACGACTGA

Upstream 100 bases:

>100_bases
GTGATGGACAAAGGATGGCGGCAGTGTGTGCCCCGGTCCTTAAATCCACCATGAAGCGCCCGTTCACGTGCCGTTTAAGG
CAGTCCGCAATAATCGCGCG

Downstream 100 bases:

>100_bases
TGCGCGTACTGGTGGTGGAAGACGATGAGGCGCTGGCGCGGCAATTGCGCGAGGCCCTGGAGGCCGCGGGCTTCGCGGTG
GACGTGGAGCACGACGGCGA

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MPRLTLRALLRTAALAAAALACVPGGPVSAAEQDAARRGVLSGQLKPLNSIIADIGRQYGGRVIEVESKRGRKGELRYEI
TVIDARGEKHEVLVDAASGAVVAQEREWATQPVPLAQMARYIRQLEQKYGTRVVNAEFERDGQGKAVYEVKLSERPAGEM
KLLLDVRTGEVLHPPVPAAAQVAPKSMAVVLESLRPKFSGLVLEVELETDHRRRPYYSVELQQPNGFKLELEVDAATLEV
TRQKVDDD

Sequences:

>Translated_248_residues
MPRLTLRALLRTAALAAAALACVPGGPVSAAEQDAARRGVLSGQLKPLNSIIADIGRQYGGRVIEVESKRGRKGELRYEI
TVIDARGEKHEVLVDAASGAVVAQEREWATQPVPLAQMARYIRQLEQKYGTRVVNAEFERDGQGKAVYEVKLSERPAGEM
KLLLDVRTGEVLHPPVPAAAQVAPKSMAVVLESLRPKFSGLVLEVELETDHRRRPYYSVELQQPNGFKLELEVDAATLEV
TRQKVDDD
>Mature_247_residues
PRLTLRALLRTAALAAAALACVPGGPVSAAEQDAARRGVLSGQLKPLNSIIADIGRQYGGRVIEVESKRGRKGELRYEIT
VIDARGEKHEVLVDAASGAVVAQEREWATQPVPLAQMARYIRQLEQKYGTRVVNAEFERDGQGKAVYEVKLSERPAGEMK
LLLDVRTGEVLHPPVPAAAQVAPKSMAVVLESLRPKFSGLVLEVELETDHRRRPYYSVELQQPNGFKLELEVDAATLEVT
RQKVDDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27226; Mature: 27094

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLTLRALLRTAALAAAALACVPGGPVSAAEQDAARRGVLSGQLKPLNSIIADIGRQYG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC
GRVIEVESKRGRKGELRYEITVIDARGEKHEVLVDAASGAVVAQEREWATQPVPLAQMAR
CEEEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCEEEECCCCCCCCCCHHHHHH
YIRQLEQKYGTRVVNAEFERDGQGKAVYEVKLSERPAGEMKLLLDVRTGEVLHPPVPAAA
HHHHHHHHHCCEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEECCCCCHHH
QVAPKSMAVVLESLRPKFSGLVLEVELETDHRRRPYYSVELQQPNGFKLELEVDAATLEV
HHCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEECHHHHHH
TRQKVDDD
HHHHCCCC
>Mature Secondary Structure 
PRLTLRALLRTAALAAAALACVPGGPVSAAEQDAARRGVLSGQLKPLNSIIADIGRQYG
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC
GRVIEVESKRGRKGELRYEITVIDARGEKHEVLVDAASGAVVAQEREWATQPVPLAQMAR
CEEEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCEEEECCCCCCCCCCHHHHHH
YIRQLEQKYGTRVVNAEFERDGQGKAVYEVKLSERPAGEMKLLLDVRTGEVLHPPVPAAA
HHHHHHHHHCCEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEECCCCCHHH
QVAPKSMAVVLESLRPKFSGLVLEVELETDHRRRPYYSVELQQPNGFKLELEVDAATLEV
HHCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEECHHHHHH
TRQKVDDD
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA