| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120612422
Identifier: 120612422
GI number: 120612422
Start: 4198881
End: 4199627
Strand: Reverse
Name: 120612422
Synonym: Aave_3780
Alternate gene names: NA
Gene position: 4199627-4198881 (Counterclockwise)
Preceding gene: 120612424
Following gene: 120612421
Centisome position: 78.46
GC content: 70.01
Gene sequence:
>747_bases ATGCCACGTCTGACACTGCGCGCCTTGTTGCGGACCGCCGCCCTTGCCGCGGCGGCGCTCGCGTGCGTGCCGGGCGGGCC GGTGTCCGCGGCCGAACAGGACGCAGCGCGGCGCGGAGTGCTCAGCGGCCAGCTCAAGCCCCTCAACAGCATCATCGCGG ACATCGGCCGCCAGTACGGGGGGCGCGTCATCGAGGTGGAAAGCAAGCGCGGGCGCAAGGGCGAGCTGCGCTACGAGATC ACGGTCATCGACGCCCGGGGCGAGAAGCACGAGGTGCTGGTGGACGCCGCCTCCGGCGCGGTCGTCGCGCAGGAGCGCGA ATGGGCGACGCAGCCCGTCCCGCTGGCGCAGATGGCCCGCTACATCCGCCAGCTGGAGCAGAAGTACGGCACGCGCGTGG TGAATGCCGAGTTCGAGCGCGACGGCCAGGGCAAGGCGGTGTACGAGGTCAAGCTCTCGGAACGGCCTGCCGGCGAAATG AAGCTGCTGCTGGACGTGCGCACGGGCGAGGTGCTGCATCCCCCCGTGCCCGCCGCCGCGCAGGTCGCGCCGAAATCCAT GGCCGTGGTGCTCGAGTCGCTGCGGCCGAAATTCTCCGGACTGGTGCTGGAGGTGGAGCTGGAGACCGACCACCGCCGCC GCCCCTACTACAGTGTCGAACTGCAGCAGCCCAACGGCTTCAAGCTGGAACTGGAAGTGGATGCCGCCACCCTGGAGGTG ACGCGGCAGAAGGTGGACGACGACTGA
Upstream 100 bases:
>100_bases GTGATGGACAAAGGATGGCGGCAGTGTGTGCCCCGGTCCTTAAATCCACCATGAAGCGCCCGTTCACGTGCCGTTTAAGG CAGTCCGCAATAATCGCGCG
Downstream 100 bases:
>100_bases TGCGCGTACTGGTGGTGGAAGACGATGAGGCGCTGGCGCGGCAATTGCGCGAGGCCCTGGAGGCCGCGGGCTTCGCGGTG GACGTGGAGCACGACGGCGA
Product: peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MPRLTLRALLRTAALAAAALACVPGGPVSAAEQDAARRGVLSGQLKPLNSIIADIGRQYGGRVIEVESKRGRKGELRYEI TVIDARGEKHEVLVDAASGAVVAQEREWATQPVPLAQMARYIRQLEQKYGTRVVNAEFERDGQGKAVYEVKLSERPAGEM KLLLDVRTGEVLHPPVPAAAQVAPKSMAVVLESLRPKFSGLVLEVELETDHRRRPYYSVELQQPNGFKLELEVDAATLEV TRQKVDDD
Sequences:
>Translated_248_residues MPRLTLRALLRTAALAAAALACVPGGPVSAAEQDAARRGVLSGQLKPLNSIIADIGRQYGGRVIEVESKRGRKGELRYEI TVIDARGEKHEVLVDAASGAVVAQEREWATQPVPLAQMARYIRQLEQKYGTRVVNAEFERDGQGKAVYEVKLSERPAGEM KLLLDVRTGEVLHPPVPAAAQVAPKSMAVVLESLRPKFSGLVLEVELETDHRRRPYYSVELQQPNGFKLELEVDAATLEV TRQKVDDD >Mature_247_residues PRLTLRALLRTAALAAAALACVPGGPVSAAEQDAARRGVLSGQLKPLNSIIADIGRQYGGRVIEVESKRGRKGELRYEIT VIDARGEKHEVLVDAASGAVVAQEREWATQPVPLAQMARYIRQLEQKYGTRVVNAEFERDGQGKAVYEVKLSERPAGEMK LLLDVRTGEVLHPPVPAAAQVAPKSMAVVLESLRPKFSGLVLEVELETDHRRRPYYSVELQQPNGFKLELEVDAATLEVT RQKVDDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27226; Mature: 27094
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLTLRALLRTAALAAAALACVPGGPVSAAEQDAARRGVLSGQLKPLNSIIADIGRQYG CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC GRVIEVESKRGRKGELRYEITVIDARGEKHEVLVDAASGAVVAQEREWATQPVPLAQMAR CEEEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCEEEECCCCCCCCCCHHHHHH YIRQLEQKYGTRVVNAEFERDGQGKAVYEVKLSERPAGEMKLLLDVRTGEVLHPPVPAAA HHHHHHHHHCCEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEECCCCCHHH QVAPKSMAVVLESLRPKFSGLVLEVELETDHRRRPYYSVELQQPNGFKLELEVDAATLEV HHCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEECHHHHHH TRQKVDDD HHHHCCCC >Mature Secondary Structure PRLTLRALLRTAALAAAALACVPGGPVSAAEQDAARRGVLSGQLKPLNSIIADIGRQYG CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC GRVIEVESKRGRKGELRYEITVIDARGEKHEVLVDAASGAVVAQEREWATQPVPLAQMAR CEEEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCEEEECCCCCCCCCCHHHHHH YIRQLEQKYGTRVVNAEFERDGQGKAVYEVKLSERPAGEMKLLLDVRTGEVLHPPVPAAA HHHHHHHHHCCEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEECCCCCHHH QVAPKSMAVVLESLRPKFSGLVLEVELETDHRRRPYYSVELQQPNGFKLELEVDAATLEV HHCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEECHHHHHH TRQKVDDD HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA