| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120612409
Identifier: 120612409
GI number: 120612409
Start: 4186600
End: 4187016
Strand: Reverse
Name: 120612409
Synonym: Aave_3766
Alternate gene names: NA
Gene position: 4187016-4186600 (Counterclockwise)
Preceding gene: 120612410
Following gene: 120612408
Centisome position: 78.22
GC content: 64.27
Gene sequence:
>417_bases ATGCGCAGCATCTTCCACCTGGCCTACAACGTTCGCGACCTGGACGAAGCCCGACGCTTCTATGGACAGGTGCTCGGCTG CGCCGAAGGGCGCAGCACCGACACCTGGGTCGATTTCGACTTTTTCGGCCACCAGCTGTCCCTGCACCTGGGCGAGCCAT TCGCCACGGCGCGCACAGGCCATGTGGGCCATGTCCTGGTGCCGATGCCCCACCTGGGCCTGGTGCTGGAGCTGCCTGAC TGGCAGGCCATGGCGGATCGCCTCCAGGCCGCAGGCACGGCATTCGTGCTGGAGCCGCAGGTTCGCTTCGAAGGCCAGCC CGGCGAGCAATGGACGATGTTCTTCATGGATCCCTTCGGCAATCCCATCGAGATGAAGGGCTTCCGCAGCCTCGACGATC TGTACAAGACCGCTTGA
Upstream 100 bases:
>100_bases GGTGGGGACAGCGTCCTGCGGTAAACCGCGTCGCCCGGCGGGCGCGAAGGCGATGGTTTAATGCGATGCTGATCCCGGCC CGCTCTCTGGCAACACACCC
Downstream 100 bases:
>100_bases GCCGGTTCAGTGTTGGAGAGATGGGTCGAACCGCATGCGTCGAGCGTTGTGCCTTGCAAACTTCCTGCTACAATCGCAGG CTTCGACACGAATGCAGGAG
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase Family Protein; Ring-Cleaving Dioxygenase; Dioxygenase; Extradiol Dioxygenase Family Protein; Dioxygenase/Glyoxalase; Glyoxalase Domain Protein; Glyoxalase/Extradiol Ring-Cleavage Dioxygenase; Dioxygenase Of Extradiol Dioxygenase Family Protein; Glyoxalase/Bleomycin Resistance Protein; Dioxygenase Protein; Glyoxalase; Glyoxalase/Bleomycin Resistance; Extradiol Family Dioxygenase; Extradiol Dioxygenase; Lactoylglutathione Lyase Protein
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MRSIFHLAYNVRDLDEARRFYGQVLGCAEGRSTDTWVDFDFFGHQLSLHLGEPFATARTGHVGHVLVPMPHLGLVLELPD WQAMADRLQAAGTAFVLEPQVRFEGQPGEQWTMFFMDPFGNPIEMKGFRSLDDLYKTA
Sequences:
>Translated_138_residues MRSIFHLAYNVRDLDEARRFYGQVLGCAEGRSTDTWVDFDFFGHQLSLHLGEPFATARTGHVGHVLVPMPHLGLVLELPD WQAMADRLQAAGTAFVLEPQVRFEGQPGEQWTMFFMDPFGNPIEMKGFRSLDDLYKTA >Mature_138_residues MRSIFHLAYNVRDLDEARRFYGQVLGCAEGRSTDTWVDFDFFGHQLSLHLGEPFATARTGHVGHVLVPMPHLGLVLELPD WQAMADRLQAAGTAFVLEPQVRFEGQPGEQWTMFFMDPFGNPIEMKGFRSLDDLYKTA
Specific function: Unknown
COG id: COG3565
COG function: function code R; Predicted dioxygenase of extradiol dioxygenase family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15689; Mature: 15689
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSIFHLAYNVRDLDEARRFYGQVLGCAEGRSTDTWVDFDFFGHQLSLHLGEPFATARTG CCCCEEEHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCC HVGHVLVPMPHLGLVLELPDWQAMADRLQAAGTAFVLEPQVRFEGQPGEQWTMFFMDPFG CCCEEEECCCCCCEEEECCCHHHHHHHHHHCCCEEEECCCEEECCCCCCEEEEEEECCCC NPIEMKGFRSLDDLYKTA CEECCCCCCCHHHHHHCC >Mature Secondary Structure MRSIFHLAYNVRDLDEARRFYGQVLGCAEGRSTDTWVDFDFFGHQLSLHLGEPFATARTG CCCCEEEHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCC HVGHVLVPMPHLGLVLELPDWQAMADRLQAAGTAFVLEPQVRFEGQPGEQWTMFFMDPFG CCCEEEECCCCCCEEEECCCHHHHHHHHHHCCCEEEECCCEEECCCCCCEEEEEEECCCC NPIEMKGFRSLDDLYKTA CEECCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA