| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is dnaK [H]
Identifier: 120612382
GI number: 120612382
Start: 4147715
End: 4149547
Strand: Direct
Name: dnaK [H]
Synonym: Aave_3739
Alternate gene names: 120612382
Gene position: 4147715-4149547 (Clockwise)
Preceding gene: 120612381
Following gene: 120612383
Centisome position: 77.49
GC content: 72.61
Gene sequence:
>1833_bases GTGAGCCAACCGAAATACGCCATCGGCATCGACCTCGGCACCACGCACAGCGCGCTCTCCTGGGTCGATCTGCACACCGA GGGCGCGGCGCCCGAGATCCTGCCCGTCGCCCAGCAGAGCGGCCCCGGCGCCGTGCAGGACTATTCCCTGCTGCCCTCCT TCCTCTACGTGCCGCACGACAGCGAATTCGCGCCCGGCGACCTGGCCCTGCCCTGGAACGCCGCGCCCGGCCGCATCACC GGCGAATGGGCGCGCAGCCACGGCGCGCTCACGCCGATCCGCCTCGTCTCCAGCGCCAAGAGCTGGCTCGGCCATGCCGG CGTGGACCGCCGCGCCGGCATCCTGCCGGCCGACGCGCCGCCCGAGGTCGAGCGCATCTCGCCGCTGGCCGCCAGCACCC ACTACCTGCAGCACCTGCGCGACGCCTGGAACCACCGCCACCCGGAGGCGCCGTTCGACCAGCAGTCCGTCACCGTCACC ATCCCCGCATCGTTCGACCCGGCCGCGCGCGAACTCACGGCCGAGGCCGCCCAGGCCGCCGGCTACCACGGCATCACCCT GCTGGAAGAGCCCCAGGCCGCGCTCTACAGCTGGATCGCGGGCAGCGCGGGCGACTGGCGCAAGCAGGTGCAGGTGGGCG ACGTGATCCTCGTCGTCGATGTGGGGGGCGGCACCAGCGACTTCTCGCTCATCGCCGTCACCGAAGACGCCGGCAACCTG CAGCTCAACCGCGTGGCCGTGGGCGAGCACATCCTGCTCGGCGGCGACAACATGGACCTGGCCCTCGCCCACGGCGTCGC GCGCGGCCTGGCCGCCGAAGGCAAACAGCTCGACCCCTGGCAGATGCGCGCGCTCACCTACGCCTGCCGCCTGGCCAAGG AGCAGTTGCTGAGCGACCCCGGCCTGCAGAGCGTGCCCCTGGTCGTGCCCAGCCGCGGCTCCAAGCTCATCGGCGGCTCC ATCCGCACCGAACTGCAGCGCGAACTGCTCTCCACCATCCTGCTCGAAGGCTTCTTCCCGGCCGTCGAGAGCAGCGCCCG GCCCATCACCCGCCCGCGCGCCGGCCTCACGCAGATCGGCCTGCCCTACGCGCAGGATGCCGCCGTCACCCGCCACCTGG CCGCGCTGCTGGGCCGCCAAGTGGGGGCCACCGCGCAGCTGCCGGGCTTCGCCCAGCCCGAGGGCGCGACCTTCCTGCAC CCCACGGCCGTGCTGTTCAACGGCGGCGTGTTCAAGTCCGAACTGCTGGCCGAACGCGTGCTCTCCACGCTCAACGCCTG GCTCGCCGCCGACGGCGCGCCCCCCGCCCGCCTGCTGCAGGGCGCCGACATGGACCATGCCGTGGCGCGCGGCGCCGCCT ACTACGGCCAGGTGCGCCAGGGCCGCGGCATCCGCATCCGCGGTGGCACGGCCCAGGCCTACTACGTCGGCATCGAATCC AGCATGCCCGCCGTGCCCGGCCTGGAGCCGCCCGTGCAGGCCCTGTGCGTCGCGCCCTTCGGCATGGAAGAAGGCTCCGA GGCACCGCTGCCTCCGCAGCAACTGGGCCTCGTGGTCGGTGAATCCGTGCGCTTCCGCTTCTTCGGATCGTCCGTGCGGC GCGACGACCAGCCCGGCACCCTGCTGGATTTTTGGTCGCCCGAAGAACTGCAGGAACTCGCGCAGATCGAAGCCACGCTG CCCGCCGAAGGCCGCGCCGCGGGCGAGGTCGTGCCCGTGCAACTGCGCGCGCGCGTGACCGACATCGGCACGCTGGAACT GCTGGCACAAGCAAGTGTCGGGGCCTCGGGCGGCGCGCAGTGGAAGGTGGAGTTCGACGTCCGCGACGCGTGA
Upstream 100 bases:
>100_bases GCACGCTGCAGCACAAGGGCTGGCGCGCCACCGCCGTGCGCCTGCCCGCCCTCACCGAAGGGCACGACACCCGCGTGATC GCCCCCGCGGAGGTCGAACT
Downstream 100 bases:
>100_bases TGGCGGCCGCCTTCCGCATCGGCATCGACCTGGGCACGACCCACACCGTGCTCGCGTTCGCGCCCCTGGGCGCGGACGAC ATCCAGGTCTTCCCCATCCC
Product: putative DnaK-like protein
Products: NA
Alternate protein names: HSP70; Heat shock 70 kDa protein; Heat shock protein 70 [H]
Number of amino acids: Translated: 610; Mature: 609
Protein sequence:
>610_residues MSQPKYAIGIDLGTTHSALSWVDLHTEGAAPEILPVAQQSGPGAVQDYSLLPSFLYVPHDSEFAPGDLALPWNAAPGRIT GEWARSHGALTPIRLVSSAKSWLGHAGVDRRAGILPADAPPEVERISPLAASTHYLQHLRDAWNHRHPEAPFDQQSVTVT IPASFDPAARELTAEAAQAAGYHGITLLEEPQAALYSWIAGSAGDWRKQVQVGDVILVVDVGGGTSDFSLIAVTEDAGNL QLNRVAVGEHILLGGDNMDLALAHGVARGLAAEGKQLDPWQMRALTYACRLAKEQLLSDPGLQSVPLVVPSRGSKLIGGS IRTELQRELLSTILLEGFFPAVESSARPITRPRAGLTQIGLPYAQDAAVTRHLAALLGRQVGATAQLPGFAQPEGATFLH PTAVLFNGGVFKSELLAERVLSTLNAWLAADGAPPARLLQGADMDHAVARGAAYYGQVRQGRGIRIRGGTAQAYYVGIES SMPAVPGLEPPVQALCVAPFGMEEGSEAPLPPQQLGLVVGESVRFRFFGSSVRRDDQPGTLLDFWSPEELQELAQIEATL PAEGRAAGEVVPVQLRARVTDIGTLELLAQASVGASGGAQWKVEFDVRDA
Sequences:
>Translated_610_residues MSQPKYAIGIDLGTTHSALSWVDLHTEGAAPEILPVAQQSGPGAVQDYSLLPSFLYVPHDSEFAPGDLALPWNAAPGRIT GEWARSHGALTPIRLVSSAKSWLGHAGVDRRAGILPADAPPEVERISPLAASTHYLQHLRDAWNHRHPEAPFDQQSVTVT IPASFDPAARELTAEAAQAAGYHGITLLEEPQAALYSWIAGSAGDWRKQVQVGDVILVVDVGGGTSDFSLIAVTEDAGNL QLNRVAVGEHILLGGDNMDLALAHGVARGLAAEGKQLDPWQMRALTYACRLAKEQLLSDPGLQSVPLVVPSRGSKLIGGS IRTELQRELLSTILLEGFFPAVESSARPITRPRAGLTQIGLPYAQDAAVTRHLAALLGRQVGATAQLPGFAQPEGATFLH PTAVLFNGGVFKSELLAERVLSTLNAWLAADGAPPARLLQGADMDHAVARGAAYYGQVRQGRGIRIRGGTAQAYYVGIES SMPAVPGLEPPVQALCVAPFGMEEGSEAPLPPQQLGLVVGESVRFRFFGSSVRRDDQPGTLLDFWSPEELQELAQIEATL PAEGRAAGEVVPVQLRARVTDIGTLELLAQASVGASGGAQWKVEFDVRDA >Mature_609_residues SQPKYAIGIDLGTTHSALSWVDLHTEGAAPEILPVAQQSGPGAVQDYSLLPSFLYVPHDSEFAPGDLALPWNAAPGRITG EWARSHGALTPIRLVSSAKSWLGHAGVDRRAGILPADAPPEVERISPLAASTHYLQHLRDAWNHRHPEAPFDQQSVTVTI PASFDPAARELTAEAAQAAGYHGITLLEEPQAALYSWIAGSAGDWRKQVQVGDVILVVDVGGGTSDFSLIAVTEDAGNLQ LNRVAVGEHILLGGDNMDLALAHGVARGLAAEGKQLDPWQMRALTYACRLAKEQLLSDPGLQSVPLVVPSRGSKLIGGSI RTELQRELLSTILLEGFFPAVESSARPITRPRAGLTQIGLPYAQDAAVTRHLAALLGRQVGATAQLPGFAQPEGATFLHP TAVLFNGGVFKSELLAERVLSTLNAWLAADGAPPARLLQGADMDHAVARGAAYYGQVRQGRGIRIRGGTAQAYYVGIESS MPAVPGLEPPVQALCVAPFGMEEGSEAPLPPQQLGLVVGESVRFRFFGSSVRRDDQPGTLLDFWSPEELQELAQIEATLP AEGRAAGEVVPVQLRARVTDIGTLELLAQASVGASGGAQWKVEFDVRDA
Specific function: Acts as a chaperone [H]
COG id: COG0443
COG function: function code O; Molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 70 family [H]
Homologues:
Organism=Escherichia coli, GI1788875, Length=272, Percent_Identity=30.5147058823529, Blast_Score=69, Evalue=8e-13, Organism=Escherichia coli, GI1786196, Length=308, Percent_Identity=25.974025974026, Blast_Score=67, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17534015, Length=318, Percent_Identity=27.3584905660377, Blast_Score=75, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17534013, Length=318, Percent_Identity=27.3584905660377, Blast_Score=75, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6324120, Length=312, Percent_Identity=26.6025641025641, Blast_Score=70, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6319972, Length=312, Percent_Identity=26.6025641025641, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012725 - InterPro: IPR018181 - InterPro: IPR001023 - InterPro: IPR013126 [H]
Pfam domain/function: PF00012 HSP70 [H]
EC number: NA
Molecular weight: Translated: 64640; Mature: 64509
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS00297 HSP70_1 ; PS00329 HSP70_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPKYAIGIDLGTTHSALSWVDLHTEGAAPEILPVAQQSGPGAVQDYSLLPSFLYVPHD CCCCCEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCHHHHCCCEEECCCC SEFAPGDLALPWNAAPGRITGEWARSHGALTPIRLVSSAKSWLGHAGVDRRAGILPADAP CCCCCCCEECCCCCCCCCEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PEVERISPLAASTHYLQHLRDAWNHRHPEAPFDQQSVTVTIPASFDPAARELTAEAAQAA CCHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHC GYHGITLLEEPQAALYSWIAGSAGDWRKQVQVGDVILVVDVGGGTSDFSLIAVTEDAGNL CCCCEEEECCCHHHHHHHHCCCCCCHHHHEEECCEEEEEECCCCCCCEEEEEEECCCCCE QLNRVAVGEHILLGGDNMDLALAHGVARGLAAEGKQLDPWQMRALTYACRLAKEQLLSDP EEEEEEECCEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC GLQSVPLVVPSRGSKLIGGSIRTELQRELLSTILLEGFFPAVESSARPITRPRAGLTQIG CCCCCCEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCC LPYAQDAAVTRHLAALLGRQVGATAQLPGFAQPEGATFLHPTAVLFNGGVFKSELLAERV CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCHHEEECCCCHHHHHHHHHH LSTLNAWLAADGAPPARLLQGADMDHAVARGAAYYGQVRQGRGIRIRGGTAQAYYVGIES HHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEECC SMPAVPGLEPPVQALCVAPFGMEEGSEAPLPPQQLGLVVGESVRFRFFGSSVRRDDQPGT CCCCCCCCCCCHHHEEECCCCCCCCCCCCCCHHHHHHEECCCEEEEEECCHHCCCCCCCC LLDFWSPEELQELAQIEATLPAEGRAAGEVVPVQLRARVTDIGTLELLAQASVGASGGAQ EEECCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHCCCCCCCCE WKVEFDVRDA EEEEEEECCC >Mature Secondary Structure SQPKYAIGIDLGTTHSALSWVDLHTEGAAPEILPVAQQSGPGAVQDYSLLPSFLYVPHD CCCCEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCHHHHCCCEEECCCC SEFAPGDLALPWNAAPGRITGEWARSHGALTPIRLVSSAKSWLGHAGVDRRAGILPADAP CCCCCCCEECCCCCCCCCEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PEVERISPLAASTHYLQHLRDAWNHRHPEAPFDQQSVTVTIPASFDPAARELTAEAAQAA CCHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHC GYHGITLLEEPQAALYSWIAGSAGDWRKQVQVGDVILVVDVGGGTSDFSLIAVTEDAGNL CCCCEEEECCCHHHHHHHHCCCCCCHHHHEEECCEEEEEECCCCCCCEEEEEEECCCCCE QLNRVAVGEHILLGGDNMDLALAHGVARGLAAEGKQLDPWQMRALTYACRLAKEQLLSDP EEEEEEECCEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC GLQSVPLVVPSRGSKLIGGSIRTELQRELLSTILLEGFFPAVESSARPITRPRAGLTQIG CCCCCCEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCC LPYAQDAAVTRHLAALLGRQVGATAQLPGFAQPEGATFLHPTAVLFNGGVFKSELLAERV CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCHHEEECCCCHHHHHHHHHH LSTLNAWLAADGAPPARLLQGADMDHAVARGAAYYGQVRQGRGIRIRGGTAQAYYVGIES HHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEECC SMPAVPGLEPPVQALCVAPFGMEEGSEAPLPPQQLGLVVGESVRFRFFGSSVRRDDQPGT CCCCCCCCCCCHHHEEECCCCCCCCCCCCCCHHHHHHEECCCEEEEEECCHHCCCCCCCC LLDFWSPEELQELAQIEATLPAEGRAAGEVVPVQLRARVTDIGTLELLAQASVGASGGAQ EEECCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHCCCCCCCCE WKVEFDVRDA EEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12835416 [H]