| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is fhuA [H]
Identifier: 120612371
GI number: 120612371
Start: 4115994
End: 4118195
Strand: Direct
Name: fhuA [H]
Synonym: Aave_3728
Alternate gene names: 120612371
Gene position: 4115994-4118195 (Clockwise)
Preceding gene: 120612370
Following gene: 120612381
Centisome position: 76.89
GC content: 70.48
Gene sequence:
>2202_bases ATGCGCCATGTTTCCGCCGCGAGGCCTGCGCGGCAGCGCCTGCTGCACGCTTCCATCACCGCGGCCTTCGGCACCGCGGC CGTGCTGTCCACCCCGCTGGCGGGGGCACAGGACGCCTCCGCCGGCTCCACCACGCTGCCCACGGTCACGGTGACCGGCG GCGCCGAGGAGAGCGCCACGGGCCGGGTGAACGGCTACACGGCACGCCGCAGCGCGACCGCCACCAAGACGGACACCCCC CTGATCGAGACGCCGCAGTCCATTTCGGTGATCCCGGCGGACCTGATGGAGGCGCAGGGCGCGCGCACGGTGAAGGACGC GCTCAGCTACTCGCCGGGCGTGATCCCGACGCGCTTCGGCGCGGACTCGCGCTACGACTGGATCTCGCTGCGCGGCTTCG ATGCCTATTCGCCGGGCTTCTACCTGGACGGCATGCCGCTGCGCAACAACGGCAACTGGGGCATCTGGCCCGTGGAGAGC TATGGGGCCGAGCGGATCGAACTGCTGCGCGGGCCGGCGTCGGTGCTGTACGGCATGAGCGGCCCGGGCGGGCTGGTGAA CGCCGTGAGCAAGCGCCCGACGGCCGAGCCGCTGCGCGAGGTGCAGGTGCAGATCGGCGACCACGGGCGCCGCCAGATCG CGGCCGACGTGTCCGGCCCGCTGCGCGAGGATGGCAAGCTGCTCTACCGCCTGACCGCGCTCACGCGCGATGCCGAGCTG CCGGCGGGCGACATGAAGGACGACCGCACCTTCATCGCCCCGGCCTTCACCTGGAAGCCCTCCGGCGACACCAGCCTGAC CGTGCTGTCGCAGTTCGGCCGCACCCGCGCCGGGGTGTACTCGCGCACGCGGCCGGCCGTGGGCTCGCTGGTGCCGACGG CCATCGGCACCACCATCCCGAGCGACCTGTTCGCCGGGGAGCCGGGCTACAACCGCTTCGACATGGACACCGCGATGATC GGCTACCTGTTCGAGCACCGCATCGATGATGCCTTCACCGTGCGGCAGAACGCGCGCTACGGCCGCCTCGAGGTGGACTA CACCGCGGTGCAGGGACGCAACTTCATCACCGTGAACCCGGCGAACCCGCGCGATCCGGCGAATTTCTCCACGCTGCGGC GCACGGTGTCGGGCAGCAACGAGCGCATCCACGCGCTGAACCTCGACAACCAGCTGGAAGCGCGCCTGCGCTCGGGCGAC GTGCAGCACACCGTGCTGGCCGGGCTGGAATACCAGCGCACCCGCATCGACCAGGTCAGCTACAGCGGCGGCTCCGCGAG CCCGCTCGACATCTACAACCCCGTGTATGGCGGCGCGGTGCAGCTGCCCGCGCCGTGGTACGACGGCGTCGCCACGCTCG CGCAGACCGGCTTCTATCTGCAGGACCAGATCAAGTGGCGCGACCGCTGGGTGCTCACGCTGGGCGCGCGCTACGACCGC GCCACCAGCGATGCGGACAGCCGGCTGGACGGCAGCCGGACCAGGGTGTCGGAACACAAGGCGACGAAGCGCGCGGGCCT GACCTACCTGGCCGAGAGCGGCTGGGCGCCGTACGTGAGCTATACCGAATCGTTCGTGCCCACGGCCATGCGCAACCCGG CCACGGGCCAGCCGTTCAAGCCCGAGACCGGCCGCCAGTACGAAGCCGGCGTGCGCTACCAGCCCGAGGGCGGCAGGCAG CGCTACAGCGCCGCCATCTTCGACCTGCGCCGCAAGAACTACCTGACCGCGGACGACAATTTCGTGCCGCGCCAGACCGG CGAGATCCAGGTGCGCGGCCTGGAGCTGGAAGCCTCGGCCGAGCTGATGCCGCGCCTGAACGTGGTGGGCTCCTACACCT ACACGCCCACGGCGAAGATCACGGCCAGCAGCACGGCGCGCGAGATCGGCAAGCCGCTCACGGCGGTGTCGCGCAACGCC GCGGCGCTGTGGGTGGACTACCGGTTCGCGAACCGCATCAAGGTGGGCCTGGGCGCGCGCTACACCGGATCCAACCATGG CGACCTGGACGCGGCGCCGGCGAAGGTGCCGTCCTTCACCGTGTTCGACGCGATGATCGGCTACGACATCGACCGCTGGA GCTTCGCGCTGAACGTGCGCAACCTGGGCGACAAGACGTATATCGGCAACTGCGACCAGTACGGCAACTGCTACTACGGC GATCCGCGCCGGGTGGTGGCGACGGCCACGTACCGCTGGTAA
Upstream 100 bases:
>100_bases AAAAACGTAACTGCGGACTGTTTAATAAGAAACATTCTCATTACAATTCGTATGCATTCCGCACTTCTGCACTTATTCCA TATCTGAAGGGGGTTTTCCG
Downstream 100 bases:
>100_bases GGCCGGCAGGCGCTTTCGGGCGCCTGCTTTTGTTTCATGCGCGCGGGGCGCGGTCGGCCGCGCGCAGTGCCTCGCGCAGG GCCCCGATGAAGGCGGGCTG
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: Ferric hydroxamate receptor; Ferric hydroxamate uptake [H]
Number of amino acids: Translated: 733; Mature: 733
Protein sequence:
>733_residues MRHVSAARPARQRLLHASITAAFGTAAVLSTPLAGAQDASAGSTTLPTVTVTGGAEESATGRVNGYTARRSATATKTDTP LIETPQSISVIPADLMEAQGARTVKDALSYSPGVIPTRFGADSRYDWISLRGFDAYSPGFYLDGMPLRNNGNWGIWPVES YGAERIELLRGPASVLYGMSGPGGLVNAVSKRPTAEPLREVQVQIGDHGRRQIAADVSGPLREDGKLLYRLTALTRDAEL PAGDMKDDRTFIAPAFTWKPSGDTSLTVLSQFGRTRAGVYSRTRPAVGSLVPTAIGTTIPSDLFAGEPGYNRFDMDTAMI GYLFEHRIDDAFTVRQNARYGRLEVDYTAVQGRNFITVNPANPRDPANFSTLRRTVSGSNERIHALNLDNQLEARLRSGD VQHTVLAGLEYQRTRIDQVSYSGGSASPLDIYNPVYGGAVQLPAPWYDGVATLAQTGFYLQDQIKWRDRWVLTLGARYDR ATSDADSRLDGSRTRVSEHKATKRAGLTYLAESGWAPYVSYTESFVPTAMRNPATGQPFKPETGRQYEAGVRYQPEGGRQ RYSAAIFDLRRKNYLTADDNFVPRQTGEIQVRGLELEASAELMPRLNVVGSYTYTPTAKITASSTAREIGKPLTAVSRNA AALWVDYRFANRIKVGLGARYTGSNHGDLDAAPAKVPSFTVFDAMIGYDIDRWSFALNVRNLGDKTYIGNCDQYGNCYYG DPRRVVATATYRW
Sequences:
>Translated_733_residues MRHVSAARPARQRLLHASITAAFGTAAVLSTPLAGAQDASAGSTTLPTVTVTGGAEESATGRVNGYTARRSATATKTDTP LIETPQSISVIPADLMEAQGARTVKDALSYSPGVIPTRFGADSRYDWISLRGFDAYSPGFYLDGMPLRNNGNWGIWPVES YGAERIELLRGPASVLYGMSGPGGLVNAVSKRPTAEPLREVQVQIGDHGRRQIAADVSGPLREDGKLLYRLTALTRDAEL PAGDMKDDRTFIAPAFTWKPSGDTSLTVLSQFGRTRAGVYSRTRPAVGSLVPTAIGTTIPSDLFAGEPGYNRFDMDTAMI GYLFEHRIDDAFTVRQNARYGRLEVDYTAVQGRNFITVNPANPRDPANFSTLRRTVSGSNERIHALNLDNQLEARLRSGD VQHTVLAGLEYQRTRIDQVSYSGGSASPLDIYNPVYGGAVQLPAPWYDGVATLAQTGFYLQDQIKWRDRWVLTLGARYDR ATSDADSRLDGSRTRVSEHKATKRAGLTYLAESGWAPYVSYTESFVPTAMRNPATGQPFKPETGRQYEAGVRYQPEGGRQ RYSAAIFDLRRKNYLTADDNFVPRQTGEIQVRGLELEASAELMPRLNVVGSYTYTPTAKITASSTAREIGKPLTAVSRNA AALWVDYRFANRIKVGLGARYTGSNHGDLDAAPAKVPSFTVFDAMIGYDIDRWSFALNVRNLGDKTYIGNCDQYGNCYYG DPRRVVATATYRW >Mature_733_residues MRHVSAARPARQRLLHASITAAFGTAAVLSTPLAGAQDASAGSTTLPTVTVTGGAEESATGRVNGYTARRSATATKTDTP LIETPQSISVIPADLMEAQGARTVKDALSYSPGVIPTRFGADSRYDWISLRGFDAYSPGFYLDGMPLRNNGNWGIWPVES YGAERIELLRGPASVLYGMSGPGGLVNAVSKRPTAEPLREVQVQIGDHGRRQIAADVSGPLREDGKLLYRLTALTRDAEL PAGDMKDDRTFIAPAFTWKPSGDTSLTVLSQFGRTRAGVYSRTRPAVGSLVPTAIGTTIPSDLFAGEPGYNRFDMDTAMI GYLFEHRIDDAFTVRQNARYGRLEVDYTAVQGRNFITVNPANPRDPANFSTLRRTVSGSNERIHALNLDNQLEARLRSGD VQHTVLAGLEYQRTRIDQVSYSGGSASPLDIYNPVYGGAVQLPAPWYDGVATLAQTGFYLQDQIKWRDRWVLTLGARYDR ATSDADSRLDGSRTRVSEHKATKRAGLTYLAESGWAPYVSYTESFVPTAMRNPATGQPFKPETGRQYEAGVRYQPEGGRQ RYSAAIFDLRRKNYLTADDNFVPRQTGEIQVRGLELEASAELMPRLNVVGSYTYTPTAKITASSTAREIGKPLTAVSRNA AALWVDYRFANRIKVGLGARYTGSNHGDLDAAPAKVPSFTVFDAMIGYDIDRWSFALNVRNLGDKTYIGNCDQYGNCYYG DPRRVVATATYRW
Specific function: This receptor binds the ferrichrome-iron ligand. It interacts with the tonB protein, which is responsible for energy coupling of the ferrichrome-promoted iron transport system. Acts as a receptor for bacteriophage T5 as well as T1, phi80 and colicin M. Bi
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=742, Percent_Identity=38.544474393531, Blast_Score=434, Evalue=1e-122, Organism=Escherichia coli, GI1787024, Length=781, Percent_Identity=26.2483994878361, Blast_Score=164, Evalue=2e-41, Organism=Escherichia coli, GI1787344, Length=729, Percent_Identity=24.0054869684499, Blast_Score=120, Evalue=4e-28, Organism=Escherichia coli, GI1788478, Length=725, Percent_Identity=23.448275862069, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 80206; Mature: 80206
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHVSAARPARQRLLHASITAAFGTAAVLSTPLAGAQDASAGSTTLPTVTVTGGAEESAT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCC GRVNGYTARRSATATKTDTPLIETPQSISVIPADLMEAQGARTVKDALSYSPGVIPTRFG CCCCCEEECCCCCCCCCCCCCCCCCCCCEECCHHHHHCCCCHHHHHHHCCCCCCCEEECC ADSRYDWISLRGFDAYSPGFYLDGMPLRNNGNWGIWPVESYGAERIELLRGPASVLYGMS CCCCCCEEEEECCCCCCCCEEECCEEECCCCCCCEEECHHCCHHHHHHHCCCHHHEECCC GPGGLVNAVSKRPTAEPLREVQVQIGDHGRRQIAADVSGPLREDGKLLYRLTALTRDAEL CCCHHHHHHHCCCCHHHHHHHHEEECCCCCEEEEECCCCCCCCCCEEEEEEEHHHCCCCC PAGDMKDDRTFIAPAFTWKPSGDTSLTVLSQFGRTRAGVYSRTRPAVGSLVPTAIGTTIP CCCCCCCCCEEEEEEEEECCCCCCHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHCCCC SDLFAGEPGYNRFDMDTAMIGYLFEHRIDDAFTVRQNARYGRLEVDYTAVQGRNFITVNP HHHHCCCCCCCEECHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEEEECCCEEEEECC ANPRDPANFSTLRRTVSGSNERIHALNLDNQLEARLRSGDVQHTVLAGLEYQRTRIDQVS CCCCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCCHHHHCCCHHHHHHCEEE YSGGSASPLDIYNPVYGGAVQLPAPWYDGVATLAQTGFYLQDQIKWRDRWVLTLGARYDR CCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCEEEEEEEECEEEEEEECCCCCC ATSDADSRLDGSRTRVSEHKATKRAGLTYLAESGWAPYVSYTESFVPTAMRNPATGQPFK CCCCCHHCCCCCHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCHHHCCCCCCCCCC PETGRQYEAGVRYQPEGGRQRYSAAIFDLRRKNYLTADDNFVPRQTGEIQVRGLELEASA CCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCH ELMPRLNVVGSYTYTPTAKITASSTAREIGKPLTAVSRNAAALWVDYRFANRIKVGLGAR HHCCCEEEEEEEEECCCEEEECCHHHHHHCCCHHHHCCCCEEEEEEEEECCEEEECCCEE YTGSNHGDLDAAPAKVPSFTVFDAMIGYDIDRWSFALNVRNLGDKTYIGNCDQYGNCYYG ECCCCCCCCCCCCCCCCCEEHHHHHHCCCCCCEEEEEEEECCCCCCEECCCCCCCCEEEC DPRRVVATATYRW CCCEEEEEEEECC >Mature Secondary Structure MRHVSAARPARQRLLHASITAAFGTAAVLSTPLAGAQDASAGSTTLPTVTVTGGAEESAT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCC GRVNGYTARRSATATKTDTPLIETPQSISVIPADLMEAQGARTVKDALSYSPGVIPTRFG CCCCCEEECCCCCCCCCCCCCCCCCCCCEECCHHHHHCCCCHHHHHHHCCCCCCCEEECC ADSRYDWISLRGFDAYSPGFYLDGMPLRNNGNWGIWPVESYGAERIELLRGPASVLYGMS CCCCCCEEEEECCCCCCCCEEECCEEECCCCCCCEEECHHCCHHHHHHHCCCHHHEECCC GPGGLVNAVSKRPTAEPLREVQVQIGDHGRRQIAADVSGPLREDGKLLYRLTALTRDAEL CCCHHHHHHHCCCCHHHHHHHHEEECCCCCEEEEECCCCCCCCCCEEEEEEEHHHCCCCC PAGDMKDDRTFIAPAFTWKPSGDTSLTVLSQFGRTRAGVYSRTRPAVGSLVPTAIGTTIP CCCCCCCCCEEEEEEEEECCCCCCHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHCCCC SDLFAGEPGYNRFDMDTAMIGYLFEHRIDDAFTVRQNARYGRLEVDYTAVQGRNFITVNP HHHHCCCCCCCEECHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEEEECCCEEEEECC ANPRDPANFSTLRRTVSGSNERIHALNLDNQLEARLRSGDVQHTVLAGLEYQRTRIDQVS CCCCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCCHHHHCCCHHHHHHCEEE YSGGSASPLDIYNPVYGGAVQLPAPWYDGVATLAQTGFYLQDQIKWRDRWVLTLGARYDR CCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCEEEEEEEECEEEEEEECCCCCC ATSDADSRLDGSRTRVSEHKATKRAGLTYLAESGWAPYVSYTESFVPTAMRNPATGQPFK CCCCCHHCCCCCHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCHHHCCCCCCCCCC PETGRQYEAGVRYQPEGGRQRYSAAIFDLRRKNYLTADDNFVPRQTGEIQVRGLELEASA CCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCH ELMPRLNVVGSYTYTPTAKITASSTAREIGKPLTAVSRNAAALWVDYRFANRIKVGLGAR HHCCCEEEEEEEEECCCEEEECCHHHHHHCCCHHHHCCCCEEEEEEEEECCEEEECCCEE YTGSNHGDLDAAPAKVPSFTVFDAMIGYDIDRWSFALNVRNLGDKTYIGNCDQYGNCYYG ECCCCCCCCCCCCCCCCCEEHHHHHHCCCCCCEEEEEEEECCCCCCEECCCCCCCCEEEC DPRRVVATATYRW CCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3079747; 8202364; 9278503; 2823072; 7515827; 8617231; 9856937; 9865695; 10850805 [H]