Click here to switch to the map view.

The map label for this gene is 120612310

Identifier: 120612310

GI number: 120612310

Start: 4042906

End: 4043484

Strand: Direct

Name: 120612310

Synonym: Aave_3666

Alternate gene names: NA

Gene position: 4042906-4043484 (Clockwise)

Preceding gene: 120612309

Following gene: 120612311

Centisome position: 75.53

GC content: 63.9

Gene sequence:

>579_bases
ATGGCCGCCCGACCGCGGCCCCTTACAGGAGCAACCCATGAGCGACAACACCCAGCAACGCATCGACGCCCTCGTCAAGT
CCAACGACATCCTGCTGTTCATGAAGGGCAGCGCCAGCTTCCCGATGTGCGGCTTCTCGGGCCGCGCCATCCAGATCCTC
AAGGCCTGCGGCGTGGACCCCAAGGCCGTGGCCACGGTGAACGTGCTGGAAGACCAGGAGATCCGCCAGGGCATCAAGGA
ATACAGCAACTGGCCCACCATCCCGCAGCTGTACGTGAAGGGCGAATTCATCGGCGGCTCCGACATCATGATGGAGATGT
ACGAATCCGGAGAACTGCAGCAGGTGCTCGGCGGCCAGACACAGGCCTGAGCGACGCACGGCAGGCTGTCTTCGGCTGCC
TCGCCTCCAGCCGCCTCCGGGCGGCTTTTTCATGCCCGCGGACGGGCGCGGCCCCGTGGGCGTGGCTGTCGGACAACTGC
TACCGGTTGACGGGGTTTTTCCATCTTTGGAGCCCGGCATGTTGTGTGCTTGAATGGTTGCGTGCCCTTTCACTCCAACG
AACCAGGAGCGCGCCATGA

Upstream 100 bases:

>100_bases
GCCTGGCGCGCCTGCCGCGGCCGCACCCCTGGAAACCCCGGCGCATGCCTCCACATGGTGCATGCCTCCCTCTTCGGGGC
CGCAGTGAAATAATCCCCCC

Downstream 100 bases:

>100_bases
CGACGACACACAGCCTTGTCCCGCAATCGCCTTCGATGGGCCTGCCGGTGGCCCAATTGCGCAACGTGTTCCGGCCCGGC
GACGTGGAGCGCAAGCTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MAARPRPLTGATHERQHPATHRRPRQVQRHPAVHEGQRQLPDVRLLGPRHPDPQGLRRGPQGRGHGERAGRPGDPPGHQG
IQQLAHHPAAVREGRIHRRLRHHDGDVRIRRTAAGARRPDTGLSDARQAVFGCLASSRLRAAFSCPRTGAAPWAWLSDNC
YRLTGFFHLWSPACCVLEWLRALSLQRTRSAP

Sequences:

>Translated_192_residues
MAARPRPLTGATHERQHPATHRRPRQVQRHPAVHEGQRQLPDVRLLGPRHPDPQGLRRGPQGRGHGERAGRPGDPPGHQG
IQQLAHHPAAVREGRIHRRLRHHDGDVRIRRTAAGARRPDTGLSDARQAVFGCLASSRLRAAFSCPRTGAAPWAWLSDNC
YRLTGFFHLWSPACCVLEWLRALSLQRTRSAP
>Mature_191_residues
AARPRPLTGATHERQHPATHRRPRQVQRHPAVHEGQRQLPDVRLLGPRHPDPQGLRRGPQGRGHGERAGRPGDPPGHQGI
QQLAHHPAAVREGRIHRRLRHHDGDVRIRRTAAGARRPDTGLSDARQAVFGCLASSRLRAAFSCPRTGAAPWAWLSDNCY
RLTGFFHLWSPACCVLEWLRALSLQRTRSAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21481; Mature: 21349

Theoretical pI: Translated: 12.31; Mature: 12.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARPRPLTGATHERQHPATHRRPRQVQRHPAVHEGQRQLPDVRLLGPRHPDPQGLRRGP
CCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCHHHHHHHCCCEEEECCCCCCHHHHHCCC
QGRGHGERAGRPGDPPGHQGIQQLAHHPAAVREGRIHRRLRHHDGDVRIRRTAAGARRPD
CCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
TGLSDARQAVFGCLASSRLRAAFSCPRTGAAPWAWLSDNCYRLTGFFHLWSPACCVLEWL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHHH
RALSLQRTRSAP
HHHHHHHHCCCC
>Mature Secondary Structure 
AARPRPLTGATHERQHPATHRRPRQVQRHPAVHEGQRQLPDVRLLGPRHPDPQGLRRGP
CCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCHHHHHHHCCCEEEECCCCCCHHHHHCCC
QGRGHGERAGRPGDPPGHQGIQQLAHHPAAVREGRIHRRLRHHDGDVRIRRTAAGARRPD
CCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
TGLSDARQAVFGCLASSRLRAAFSCPRTGAAPWAWLSDNCYRLTGFFHLWSPACCVLEWL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHHH
RALSLQRTRSAP
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA