Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612252
Identifier: 120612252
GI number: 120612252
Start: 3977379
End: 3979340
Strand: Reverse
Name: 120612252
Synonym: Aave_3605
Alternate gene names: NA
Gene position: 3979340-3977379 (Counterclockwise)
Preceding gene: 120612253
Following gene: 120612251
Centisome position: 74.34
GC content: 67.84
Gene sequence:
>1962_bases GTGGGACCTTCTTTCAACGAGCAATTCGACCAGCATGGCGCCTGGCGGCGCGCGTTCGCGCTGCAACTGAAGCACCTGGG GGAATGGATGTCGTCCCATGCCCTCATGGATGCCGCCATCGAGGAAAAGCTGCGCCGCCTGGAAGACCAGGTGCGCAGCG ACAGGGTCATGGTCGCATTCGTCGCGGAATTCTCGCGCGGCAAGTCCGAGCTCATCAACGCGATCTTCTTCGCCGACTAC GGCCGCCGCATCATGCCGGCCAGCGCGGGGCGCACCACGATGTGCCCTACCGAACTCGGGTACGACCCGGCGCTGCCCAA CAGCCTCAGGCTGCTGCCCATCGATACGCGCAAGCAGTCCCAGGGCCTCGCCGAATGGCGGCTGCGGCCGGACCAGTGGA CCGAAGTCCCGCTGAACGTCGGCGATGCCGAGCAGCTCGCCCAGGCCATCGAGAAGGTGTCTGAAGTGCGCAGGGTCCCG CAGGACGAGGCGCGCGCCCTCGGCTTCTGGCACGACGACCAGCCGCAGGAGAATCCCGTGCCCGACGCGAACGGGCTGGT GGAGGTGCCGGCGTGGCGCCATGCGCTGATCAATATTCCCCACCCCCTGCTGCGGCAGGGCCTGGTCATCCTGGACACTC CCGGCCTCAATGCCGTGGGTGCCGAGCCGGAACTCACCATCAATCTCATCCCCCAGGCCCATGCCGTGCTGTTCATCCTG GGCGCGGATACCGGCGTCACGCGGTCGGACCTGGAGATCTGGCGCCAGCACGTGGCGCCGTCCGTGGGCCACGCGGATGC GCAGCTGGTGGTGCTCAACAAGATCGACACCTTGTGGGACACGCTGAACTCCCCGACCCAGGTGCAGGAGCAGCTGGACC GGCAGCGGCTGGCCTCCGCCGACATGCTGGGCGTGGCGCCCGACCAGGTGCTGCTGGTGTCCGCCCAGAAGGGCCTGGTG TCCAAGATCCACTGCGACGACGTGTTGCTGGAGTCGAGCGGGCTGCCGGCGCTGGAAGATGCCCTGGCTCAGGGAGTGAT GGGCAAGCGCCAGGCCATCCTGCGCTCGGCCGTGACGGCCGGCGTGGCGTCCCTGCGCTCGGAGGCGGGCCGGACGATCA ACATCCGCCGCCGCGACCTCGACGACCAGATGCTGGAACTGCGCAGCCTGCGCGGCAAGAATGCATCGGTGATCGAATCC ATGCGCGTGCGCATCGAGCAGGAGCAGCGCGAATTCGACGCCAGCGCCGCCAAGATCCAGGCGGTGCGCGCCGTGCACCT GAAGCTGCTGCGCGACATCTTCCATGATCTGGGCGCGCGCTCGCTCAAGGCGGAGATGACGGCGCTGGTCGAAACCCTTC AGCAAAAGGGGATCAAGCTCGGGGTCCGCAAGGTGTACGCGGATACGTTCGAGCGCCTGCGCGCCATCATGGACAAGGCC CAGGCCTCCGCCACCGAAATCCACGCCATGCTGGGCGGAACGTTCCGCCAGCTCAACGCGGACTTCGGCTTTTCGCTGCA GGTGCCCGCCACGCCGCGGCTCGAGGGGTTTCTCACGGAGATCCAGCAGATCGAAAGCCGCCACCTGCAGTACATCGGAG TAGGCAACACCCTGCGGCTGGCGCAGCCCGACTTCACGCAGCGCCTCGTGCGGGCGCTGGGAATGCGCCTGCGCACGGTG TTCGAATCGGCCGCGAACGACCTGGAGCTGTGGAGCAAGTCCGCCACCGCGCAACTCGATGCGCAACTGCGGGAGCGCAA GCGCAGCTTCGCCCGGCGCATCGAGGCCGTGGACCGCATCCAGCACGCCGCCAGTGGCCTCGTGGAACGCATCGCGGAGA TCGAGCAGGCCGAGCAGGAACTCGCGCAACTGGAGGCGCGCCTGCACGAGCTGACGGAGCAACTGGCTTCCCTGCCGGCG GAAAACGGCAAGCCCCAGCCCCGGGCGCCGCTGTCCGCATGA
Upstream 100 bases:
>100_bases GCCAGCGTCCCTGATTTGAATGGGCAATGCCGCCCGGGGTACTGATATATTTTGCAGGTGCCTGCAGGGCCGCAGCGCAG CATCCACCTCCAGGAGCACC
Downstream 100 bases:
>100_bases AGCGCGAGGTCCCCGACATCGCCACCGAAGTGGTGCGCTGGCAGGCCGTGCACGGCCGCAACCACCTGCCGTGGCAGCAG ACGCGCGACCCCTACCGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 653; Mature: 652
Protein sequence:
>653_residues MGPSFNEQFDQHGAWRRAFALQLKHLGEWMSSHALMDAAIEEKLRRLEDQVRSDRVMVAFVAEFSRGKSELINAIFFADY GRRIMPASAGRTTMCPTELGYDPALPNSLRLLPIDTRKQSQGLAEWRLRPDQWTEVPLNVGDAEQLAQAIEKVSEVRRVP QDEARALGFWHDDQPQENPVPDANGLVEVPAWRHALINIPHPLLRQGLVILDTPGLNAVGAEPELTINLIPQAHAVLFIL GADTGVTRSDLEIWRQHVAPSVGHADAQLVVLNKIDTLWDTLNSPTQVQEQLDRQRLASADMLGVAPDQVLLVSAQKGLV SKIHCDDVLLESSGLPALEDALAQGVMGKRQAILRSAVTAGVASLRSEAGRTINIRRRDLDDQMLELRSLRGKNASVIES MRVRIEQEQREFDASAAKIQAVRAVHLKLLRDIFHDLGARSLKAEMTALVETLQQKGIKLGVRKVYADTFERLRAIMDKA QASATEIHAMLGGTFRQLNADFGFSLQVPATPRLEGFLTEIQQIESRHLQYIGVGNTLRLAQPDFTQRLVRALGMRLRTV FESAANDLELWSKSATAQLDAQLRERKRSFARRIEAVDRIQHAASGLVERIAEIEQAEQELAQLEARLHELTEQLASLPA ENGKPQPRAPLSA
Sequences:
>Translated_653_residues MGPSFNEQFDQHGAWRRAFALQLKHLGEWMSSHALMDAAIEEKLRRLEDQVRSDRVMVAFVAEFSRGKSELINAIFFADY GRRIMPASAGRTTMCPTELGYDPALPNSLRLLPIDTRKQSQGLAEWRLRPDQWTEVPLNVGDAEQLAQAIEKVSEVRRVP QDEARALGFWHDDQPQENPVPDANGLVEVPAWRHALINIPHPLLRQGLVILDTPGLNAVGAEPELTINLIPQAHAVLFIL GADTGVTRSDLEIWRQHVAPSVGHADAQLVVLNKIDTLWDTLNSPTQVQEQLDRQRLASADMLGVAPDQVLLVSAQKGLV SKIHCDDVLLESSGLPALEDALAQGVMGKRQAILRSAVTAGVASLRSEAGRTINIRRRDLDDQMLELRSLRGKNASVIES MRVRIEQEQREFDASAAKIQAVRAVHLKLLRDIFHDLGARSLKAEMTALVETLQQKGIKLGVRKVYADTFERLRAIMDKA QASATEIHAMLGGTFRQLNADFGFSLQVPATPRLEGFLTEIQQIESRHLQYIGVGNTLRLAQPDFTQRLVRALGMRLRTV FESAANDLELWSKSATAQLDAQLRERKRSFARRIEAVDRIQHAASGLVERIAEIEQAEQELAQLEARLHELTEQLASLPA ENGKPQPRAPLSA >Mature_652_residues GPSFNEQFDQHGAWRRAFALQLKHLGEWMSSHALMDAAIEEKLRRLEDQVRSDRVMVAFVAEFSRGKSELINAIFFADYG RRIMPASAGRTTMCPTELGYDPALPNSLRLLPIDTRKQSQGLAEWRLRPDQWTEVPLNVGDAEQLAQAIEKVSEVRRVPQ DEARALGFWHDDQPQENPVPDANGLVEVPAWRHALINIPHPLLRQGLVILDTPGLNAVGAEPELTINLIPQAHAVLFILG ADTGVTRSDLEIWRQHVAPSVGHADAQLVVLNKIDTLWDTLNSPTQVQEQLDRQRLASADMLGVAPDQVLLVSAQKGLVS KIHCDDVLLESSGLPALEDALAQGVMGKRQAILRSAVTAGVASLRSEAGRTINIRRRDLDDQMLELRSLRGKNASVIESM RVRIEQEQREFDASAAKIQAVRAVHLKLLRDIFHDLGARSLKAEMTALVETLQQKGIKLGVRKVYADTFERLRAIMDKAQ ASATEIHAMLGGTFRQLNADFGFSLQVPATPRLEGFLTEIQQIESRHLQYIGVGNTLRLAQPDFTQRLVRALGMRLRTVF ESAANDLELWSKSATAQLDAQLRERKRSFARRIEAVDRIQHAASGLVERIAEIEQAEQELAQLEARLHELTEQLASLPAE NGKPQPRAPLSA
Specific function: Unknown
COG id: COG0699
COG function: function code R; Predicted GTPases (dynamin-related)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72707; Mature: 72576
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPSFNEQFDQHGAWRRAFALQLKHLGEWMSSHALMDAAIEEKLRRLEDQVRSDRVMVAF CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VAEFSRGKSELINAIFFADYGRRIMPASAGRTTMCPTELGYDPALPNSLRLLPIDTRKQS HHHHHCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCHHCCCCCCCCCCEEEEEECCCHHH QGLAEWRLRPDQWTEVPLNVGDAEQLAQAIEKVSEVRRVPQDEARALGFWHDDQPQENPV CCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCC PDANGLVEVPAWRHALINIPHPLLRQGLVILDTPGLNAVGAEPELTINLIPQAHAVLFIL CCCCCEEECCHHHHHHHCCCHHHHHCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEE GADTGVTRSDLEIWRQHVAPSVGHADAQLVVLNKIDTLWDTLNSPTQVQEQLDRQRLASA ECCCCCCHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHC DMLGVAPDQVLLVSAQKGLVSKIHCDDVLLESSGLPALEDALAQGVMGKRQAILRSAVTA CCCCCCCCCEEEEECCCCHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GVASLRSEAGRTINIRRRDLDDQMLELRSLRGKNASVIESMRVRIEQEQREFDASAAKIQ HHHHHHHHCCCEEEEEHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AVRAVHLKLLRDIFHDLGARSLKAEMTALVETLQQKGIKLGVRKVYADTFERLRAIMDKA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH QASATEIHAMLGGTFRQLNADFGFSLQVPATPRLEGFLTEIQQIESRHLQYIGVGNTLRL HHHHHHHHHHHCCHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHCEEEEECCCEEEE AQPDFTQRLVRALGMRLRTVFESAANDLELWSKSATAQLDAQLRERKRSFARRIEAVDRI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QHAASGLVERIAEIEQAEQELAQLEARLHELTEQLASLPAENGKPQPRAPLSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure GPSFNEQFDQHGAWRRAFALQLKHLGEWMSSHALMDAAIEEKLRRLEDQVRSDRVMVAF CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VAEFSRGKSELINAIFFADYGRRIMPASAGRTTMCPTELGYDPALPNSLRLLPIDTRKQS HHHHHCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCHHCCCCCCCCCCEEEEEECCCHHH QGLAEWRLRPDQWTEVPLNVGDAEQLAQAIEKVSEVRRVPQDEARALGFWHDDQPQENPV CCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCC PDANGLVEVPAWRHALINIPHPLLRQGLVILDTPGLNAVGAEPELTINLIPQAHAVLFIL CCCCCEEECCHHHHHHHCCCHHHHHCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEE GADTGVTRSDLEIWRQHVAPSVGHADAQLVVLNKIDTLWDTLNSPTQVQEQLDRQRLASA ECCCCCCHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHC DMLGVAPDQVLLVSAQKGLVSKIHCDDVLLESSGLPALEDALAQGVMGKRQAILRSAVTA CCCCCCCCCEEEEECCCCHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GVASLRSEAGRTINIRRRDLDDQMLELRSLRGKNASVIESMRVRIEQEQREFDASAAKIQ HHHHHHHHCCCEEEEEHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AVRAVHLKLLRDIFHDLGARSLKAEMTALVETLQQKGIKLGVRKVYADTFERLRAIMDKA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH QASATEIHAMLGGTFRQLNADFGFSLQVPATPRLEGFLTEIQQIESRHLQYIGVGNTLRL HHHHHHHHHHHCCHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHCEEEEECCCEEEE AQPDFTQRLVRALGMRLRTVFESAANDLELWSKSATAQLDAQLRERKRSFARRIEAVDRI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QHAASGLVERIAEIEQAEQELAQLEARLHELTEQLASLPAENGKPQPRAPLSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA