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The map label for this gene is recN [H]

Identifier: 120612249

GI number: 120612249

Start: 3973721

End: 3975394

Strand: Direct

Name: recN [H]

Synonym: Aave_3602

Alternate gene names: 120612249

Gene position: 3973721-3975394 (Clockwise)

Preceding gene: 120612248

Following gene: 120612250

Centisome position: 74.24

GC content: 71.45

Gene sequence:

>1674_bases
ATGGCGTTGAAGCGGATTGCGCTGCGTGATTTCGTGATCGTCGAGTCCCTCGAGCTGGACCTCCATTCCGGATTCACCGT
CCTGACCGGCGAAACCGGCGCCGGCAAGTCCATCCTCATCGATGCGCTGCAACTGTTGCTGGGCGCGCGCGCCGATCCGG
GGGTGGTACGCGAAGGCGCGGCGTCCACGGACCTGTGCGCGGAATTCGATGGCACTCCTGCCATCGCGGCCTGGCTGGAC
GATGCGGGTATTCCACCGGAGGACGGCCTGCTGCTGCGCCGCACCATCGACACCCAGGGCAAGAGCCGCGCGTGGATCAA
CGGAGTGCCGGTGACCGCGACGCAGATGCGCACCCTGGGCTCCCGCCTCCTCGACATCCACGGGCAGCATGCCTGGCAGA
GCCTCACGCGCGCGGACGCTGTGCGCGGCCTGCTGGATGCGTACGGCGGCATCCGCCCGGAAGGCCTGCAGCCCCTCTGG
ACGCGCTGGCGCGACGACCGCAAGGCACTGGATGCCGCCGTCGCGGGCCAGAACGACATCCAGCAGGAGCGCGACCGGCT
CCAGTGGCAGATCGCGGAGATGCAGAAACTCGCCCCCGCCGATGGCGAATGGGAAGAGCTGAACGCGCAGCACACGCGCC
TTTCGCATGCGCAGGCGCTGATCGACACGGCCCAGGCCGCGCTGGCGGCGCTGGAGGACGATGAATCGGGCGCGCACGGC
CCGCTGGTGCGCGCCCGCGGCCTGCTGGAAGCCAAGGCGTCGCTGGATCCGCAGTTCCAGTCCATGCTGGACGTGCTGGC
GTCCTGCCTGGCCCAGGCATCGGACGTGGCGCATTCGCTCCAGGCCTACCTGCGCCACACGGACGTGGACCCGGACCGGC
TCGAAACGCTGGATGCGCGCATGGGGCTCTGGATGTCGCTGGCCCGGCGCTTCAAGCGCCAGCCGCAGGACCTGCCCGCG
CTGCTCGCCGGCTGGGAGGAAGAGCTCGCACGCCTGGACGGGGCCTCGGACGTGGAAGCCCTCACGGAGCAGGCCCGCCG
CAGCGAAGCCGCCTACATGCAGGCCGCCCGGGAGATTTCGCAGAAGCGCGCCAAGGCCGCCCCGCAGCTCGCGCGCGCCA
TCACGCAGGCCATGCAGGGGCTGGGCATGAAGGGCGGCCGCTTCGACGTGGCGCTCGACGCGCAGGCCGAGCCGGGCCCG
CACGGGCTGGACAACGTGGCCTTCCTGGTGGCGGGCCACCAGGGGGTGACGCCGCGCCCGATCGGCAAGGTGGCCTCGGG
CGGTGAGCTGTCGCGCATCTCGCTGGCGATCTCGGTGACCACCAGCCGCCTGGGCGAAGCGCCCACGCTGATCTTCGACG
AGGTCGATTCCGGCGTCGGCGGCTCCGTTGCGGAGACCGTGGGCCAACTGATGCAGCGGCTCGGACGCGACCGGCAGGTG
CTGGCCGTGACCCACCTGCCGCAGGTGGCCGCGTGCGCGGACCACCACCTCGTCGTGTCCAAGCGCTCCCGCCCACAGGG
AACGGTCAGCACCGTGGCGGCCACGGAAGGCGACCGCCGCATCCAGGAAATGGCGCGCATGCTCGGCGGCGAGCGCGCTT
CGGCCGCCACCCTGGCGCACGCCCGAGAGATGCTGGACAACAGCCGCGCGGCGGCCAAGGGAGCCCGGCCATGA

Upstream 100 bases:

>100_bases
AGCGCTCGGACTACCGGGCGCGCTTTCTCCATCCGCGCGGCTGGAACTACTTCGCCACGCTGCGCAAGAAGCTCCGCTGG
AACGAAGGAGGCTACTGAGC

Downstream 100 bases:

>100_bases
TGGCAGACACCCTGGAGATCGTGCTGATCACGGGCATGTCGGGCTCCGGCAAGTCCGTGGCGCTGCACGCGCTGGAAGAC
GCGGGCTACTACTGCGTGGA

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 557; Mature: 556

Protein sequence:

>557_residues
MALKRIALRDFVIVESLELDLHSGFTVLTGETGAGKSILIDALQLLLGARADPGVVREGAASTDLCAEFDGTPAIAAWLD
DAGIPPEDGLLLRRTIDTQGKSRAWINGVPVTATQMRTLGSRLLDIHGQHAWQSLTRADAVRGLLDAYGGIRPEGLQPLW
TRWRDDRKALDAAVAGQNDIQQERDRLQWQIAEMQKLAPADGEWEELNAQHTRLSHAQALIDTAQAALAALEDDESGAHG
PLVRARGLLEAKASLDPQFQSMLDVLASCLAQASDVAHSLQAYLRHTDVDPDRLETLDARMGLWMSLARRFKRQPQDLPA
LLAGWEEELARLDGASDVEALTEQARRSEAAYMQAAREISQKRAKAAPQLARAITQAMQGLGMKGGRFDVALDAQAEPGP
HGLDNVAFLVAGHQGVTPRPIGKVASGGELSRISLAISVTTSRLGEAPTLIFDEVDSGVGGSVAETVGQLMQRLGRDRQV
LAVTHLPQVAACADHHLVVSKRSRPQGTVSTVAATEGDRRIQEMARMLGGERASAATLAHAREMLDNSRAAAKGARP

Sequences:

>Translated_557_residues
MALKRIALRDFVIVESLELDLHSGFTVLTGETGAGKSILIDALQLLLGARADPGVVREGAASTDLCAEFDGTPAIAAWLD
DAGIPPEDGLLLRRTIDTQGKSRAWINGVPVTATQMRTLGSRLLDIHGQHAWQSLTRADAVRGLLDAYGGIRPEGLQPLW
TRWRDDRKALDAAVAGQNDIQQERDRLQWQIAEMQKLAPADGEWEELNAQHTRLSHAQALIDTAQAALAALEDDESGAHG
PLVRARGLLEAKASLDPQFQSMLDVLASCLAQASDVAHSLQAYLRHTDVDPDRLETLDARMGLWMSLARRFKRQPQDLPA
LLAGWEEELARLDGASDVEALTEQARRSEAAYMQAAREISQKRAKAAPQLARAITQAMQGLGMKGGRFDVALDAQAEPGP
HGLDNVAFLVAGHQGVTPRPIGKVASGGELSRISLAISVTTSRLGEAPTLIFDEVDSGVGGSVAETVGQLMQRLGRDRQV
LAVTHLPQVAACADHHLVVSKRSRPQGTVSTVAATEGDRRIQEMARMLGGERASAATLAHAREMLDNSRAAAKGARP
>Mature_556_residues
ALKRIALRDFVIVESLELDLHSGFTVLTGETGAGKSILIDALQLLLGARADPGVVREGAASTDLCAEFDGTPAIAAWLDD
AGIPPEDGLLLRRTIDTQGKSRAWINGVPVTATQMRTLGSRLLDIHGQHAWQSLTRADAVRGLLDAYGGIRPEGLQPLWT
RWRDDRKALDAAVAGQNDIQQERDRLQWQIAEMQKLAPADGEWEELNAQHTRLSHAQALIDTAQAALAALEDDESGAHGP
LVRARGLLEAKASLDPQFQSMLDVLASCLAQASDVAHSLQAYLRHTDVDPDRLETLDARMGLWMSLARRFKRQPQDLPAL
LAGWEEELARLDGASDVEALTEQARRSEAAYMQAAREISQKRAKAAPQLARAITQAMQGLGMKGGRFDVALDAQAEPGPH
GLDNVAFLVAGHQGVTPRPIGKVASGGELSRISLAISVTTSRLGEAPTLIFDEVDSGVGGSVAETVGQLMQRLGRDRQVL
AVTHLPQVAACADHHLVVSKRSRPQGTVSTVAATEGDRRIQEMARMLGGERASAATLAHAREMLDNSRAAAKGARP

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=556, Percent_Identity=40.1079136690648, Blast_Score=370, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 59827; Mature: 59696

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALKRIALRDFVIVESLELDLHSGFTVLTGETGAGKSILIDALQLLLGARADPGVVREGA
CCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
ASTDLCAEFDGTPAIAAWLDDAGIPPEDGLLLRRTIDTQGKSRAWINGVPVTATQMRTLG
CCCCHHHHCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEECCCCCHHHHHHHHH
SRLLDIHGQHAWQSLTRADAVRGLLDAYGGIRPEGLQPLWTRWRDDRKALDAAVAGQNDI
HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHH
QQERDRLQWQIAEMQKLAPADGEWEELNAQHTRLSHAQALIDTAQAALAALEDDESGAHG
HHHHHHHHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PLVRARGLLEAKASLDPQFQSMLDVLASCLAQASDVAHSLQAYLRHTDVDPDRLETLDAR
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
MGLWMSLARRFKRQPQDLPALLAGWEEELARLDGASDVEALTEQARRSEAAYMQAAREIS
HHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QKRAKAAPQLARAITQAMQGLGMKGGRFDVALDAQAEPGPHGLDNVAFLVAGHQGVTPRP
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCC
IGKVASGGELSRISLAISVTTSRLGEAPTLIFDEVDSGVGGSVAETVGQLMQRLGRDRQV
CCCCCCCCCEEEEEEEEEEEHHHCCCCCCEEHHHHCCCCCCHHHHHHHHHHHHHCCCCEE
LAVTHLPQVAACADHHLVVSKRSRPQGTVSTVAATEGDRRIQEMARMLGGERASAATLAH
EEEECCCHHHHHCCCCEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHH
AREMLDNSRAAAKGARP
HHHHHHCCHHHCCCCCC
>Mature Secondary Structure 
ALKRIALRDFVIVESLELDLHSGFTVLTGETGAGKSILIDALQLLLGARADPGVVREGA
CCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
ASTDLCAEFDGTPAIAAWLDDAGIPPEDGLLLRRTIDTQGKSRAWINGVPVTATQMRTLG
CCCCHHHHCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEECCCCCHHHHHHHHH
SRLLDIHGQHAWQSLTRADAVRGLLDAYGGIRPEGLQPLWTRWRDDRKALDAAVAGQNDI
HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHH
QQERDRLQWQIAEMQKLAPADGEWEELNAQHTRLSHAQALIDTAQAALAALEDDESGAHG
HHHHHHHHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PLVRARGLLEAKASLDPQFQSMLDVLASCLAQASDVAHSLQAYLRHTDVDPDRLETLDAR
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
MGLWMSLARRFKRQPQDLPALLAGWEEELARLDGASDVEALTEQARRSEAAYMQAAREIS
HHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QKRAKAAPQLARAITQAMQGLGMKGGRFDVALDAQAEPGPHGLDNVAFLVAGHQGVTPRP
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCC
IGKVASGGELSRISLAISVTTSRLGEAPTLIFDEVDSGVGGSVAETVGQLMQRLGRDRQV
CCCCCCCCCEEEEEEEEEEEHHHCCCCCCEEHHHHCCCCCCHHHHHHHHHHHHHCCCCEE
LAVTHLPQVAACADHHLVVSKRSRPQGTVSTVAATEGDRRIQEMARMLGGERASAATLAH
EEEECCCHHHHHCCCCEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHH
AREMLDNSRAAAKGARP
HHHHHHCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3037486; 9205837; 9278503 [H]