Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612246
Identifier: 120612246
GI number: 120612246
Start: 3970566
End: 3971168
Strand: Reverse
Name: 120612246
Synonym: Aave_3599
Alternate gene names: NA
Gene position: 3971168-3970566 (Counterclockwise)
Preceding gene: 120612247
Following gene: 120612245
Centisome position: 74.19
GC content: 71.97
Gene sequence:
>603_bases ATGGACGCCGATCTGGCCATGGACTTGATCTGGTGCGCCACCGCGGCCGGTGCTCTTGGCGGTATCGGTGCGGGCCTCCT GGCTGGCCTCGTCACGGAGGTGGCGCGCGCCCTGCGTCTGATTGACCGCATCCCGCAGGGGCCGGATGAGGCCCCGGACC GGGGTATGGGGCGGCGCCCCATGGCGGACCTGTCTCGCGCAACGTGCCCCATGGCACCGGGCGGGGAGTGCCCAGCGCGC CGGGTTGACCATGCCAGCGATGTCAGCGTCTCCGGCGGGGATGCCGGGCGCAGGGGCAAGCACGGCGCAGGCCCGCGCCC GGCAGCGCCGGCATCCCCCCGCCCGCATTCGCGCTTGGGAGACAACGTGCCGCAGGCACTCCCGCCCGGCGTTCTGGGCG CTGGCGGTGGCGGGTCTGGAGGAAAGCAAGGCTTTCCGGAGGACTCGGCATCGCTGCCCCTGTACCTCGCTCCGCTGCTC GTCCTGGGCGCTTGCGGTGATGGGTCTGGAGGAAAGCATGGCTTTCCGGAGGACTCAGCATCGCGCCCCGATCCTGAGCC GGCTGCCAGTGGGTTCGCCGACACCGTGCCCGTGGGCGATTGA
Upstream 100 bases:
>100_bases GGGATCGCCGCATCAACGCCATCCTGACGGCGCTGACGCCGTACACCCGTGGCAAGGCTGGCCCTGCTGCCGGTGCGTCC GCGGCTCCGAAGGTCTGACC
Downstream 100 bases:
>100_bases GGTGTTAGCGGTCTGCTCGCATGTCGTGCGTATCCGCCCACGCTGGCCTGTCAATCGGCCTCCGCGGCATTGCGTCGCGC ATGCCGTCTCGGACTGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MDADLAMDLIWCATAAGALGGIGAGLLAGLVTEVARALRLIDRIPQGPDEAPDRGMGRRPMADLSRATCPMAPGGECPAR RVDHASDVSVSGGDAGRRGKHGAGPRPAAPASPRPHSRLGDNVPQALPPGVLGAGGGGSGGKQGFPEDSASLPLYLAPLL VLGACGDGSGGKHGFPEDSASRPDPEPAASGFADTVPVGD
Sequences:
>Translated_200_residues MDADLAMDLIWCATAAGALGGIGAGLLAGLVTEVARALRLIDRIPQGPDEAPDRGMGRRPMADLSRATCPMAPGGECPAR RVDHASDVSVSGGDAGRRGKHGAGPRPAAPASPRPHSRLGDNVPQALPPGVLGAGGGGSGGKQGFPEDSASLPLYLAPLL VLGACGDGSGGKHGFPEDSASRPDPEPAASGFADTVPVGD >Mature_200_residues MDADLAMDLIWCATAAGALGGIGAGLLAGLVTEVARALRLIDRIPQGPDEAPDRGMGRRPMADLSRATCPMAPGGECPAR RVDHASDVSVSGGDAGRRGKHGAGPRPAAPASPRPHSRLGDNVPQALPPGVLGAGGGGSGGKQGFPEDSASLPLYLAPLL VLGACGDGSGGKHGFPEDSASRPDPEPAASGFADTVPVGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19763; Mature: 19763
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDADLAMDLIWCATAAGALGGIGAGLLAGLVTEVARALRLIDRIPQGPDEAPDRGMGRRP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC MADLSRATCPMAPGGECPARRVDHASDVSVSGGDAGRRGKHGAGPRPAAPASPRPHSRLG HHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC DNVPQALPPGVLGAGGGGSGGKQGFPEDSASLPLYLAPLLVLGACGDGSGGKHGFPEDSA CCCCHHCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC SRPDPEPAASGFADTVPVGD CCCCCCHHHCCCCCCCCCCC >Mature Secondary Structure MDADLAMDLIWCATAAGALGGIGAGLLAGLVTEVARALRLIDRIPQGPDEAPDRGMGRRP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC MADLSRATCPMAPGGECPARRVDHASDVSVSGGDAGRRGKHGAGPRPAAPASPRPHSRLG HHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC DNVPQALPPGVLGAGGGGSGGKQGFPEDSASLPLYLAPLLVLGACGDGSGGKHGFPEDSA CCCCHHCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC SRPDPEPAASGFADTVPVGD CCCCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA