Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612245
Identifier: 120612245
GI number: 120612245
Start: 3969528
End: 3969974
Strand: Reverse
Name: 120612245
Synonym: Aave_3598
Alternate gene names: NA
Gene position: 3969974-3969528 (Counterclockwise)
Preceding gene: 120612246
Following gene: 120612244
Centisome position: 74.17
GC content: 64.21
Gene sequence:
>447_bases ATGGCTGCGCCAAGCGGCCGGAGTGCCTGTGATGGCTGCGCACGTCACCGCGTTGCTCCTTGCCTGGGCTATTGGCTATG CGGCCGGTTGGAAGGTCCGAATGATCCGGGACGCCTTCTACGCGGCTTAGATCACGGCTTAGATCACGGCGCTATGTCGC TGCTAAATCGGCGGCATACCGGCGTAATCCTGCGCCTCTATCTGGAGATTTCCATGTTCGAAAAAATCGGTCCCTCTGTG TCCCGCGCCCGTGCCGCCGTTGTCGGCGCCGCGCTCTCCGTTGCTGCCGCTGCCCATGCGGCAGATCCCGCCACCGCCCA GGAGGCCCTGGGTACCCTGTCCACCAGCAACACAGGCTACGGCCCTGTGCTGTGGGGCATGGCTGCTGCTGCTGTCGGCA TCATGATCGGCATCAAGTGGATCAAGCGCGGCCGCGGCGCAGCGTAA
Upstream 100 bases:
>100_bases GCCTTCCTGTGGGGCTGCTACTACCTCTGGTCCAAGTGGCAAAGCCCGTTCGGCGGCTGGAGTCCGCTGAGCGTCACCAG CGTCATGCCTCGTATGCCCG
Downstream 100 bases:
>100_bases TCCAATGCTCTGCCTACTGCGCCTGCTCGGCCTCCTGCTGCGCGGGCGCAGTGGGAAGGCCATTGCTACCTCTGCGCTGC TCGCTGTCTGTGCGTCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MAAPSGRSACDGCARHRVAPCLGYWLCGRLEGPNDPGRLLRGLDHGLDHGAMSLLNRRHTGVILRLYLEISMFEKIGPSV SRARAAVVGAALSVAAAAHAADPATAQEALGTLSTSNTGYGPVLWGMAAAAVGIMIGIKWIKRGRGAA
Sequences:
>Translated_148_residues MAAPSGRSACDGCARHRVAPCLGYWLCGRLEGPNDPGRLLRGLDHGLDHGAMSLLNRRHTGVILRLYLEISMFEKIGPSV SRARAAVVGAALSVAAAAHAADPATAQEALGTLSTSNTGYGPVLWGMAAAAVGIMIGIKWIKRGRGAA >Mature_147_residues AAPSGRSACDGCARHRVAPCLGYWLCGRLEGPNDPGRLLRGLDHGLDHGAMSLLNRRHTGVILRLYLEISMFEKIGPSVS RARAAVVGAALSVAAAAHAADPATAQEALGTLSTSNTGYGPVLWGMAAAAVGIMIGIKWIKRGRGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15299; Mature: 15168
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPSGRSACDGCARHRVAPCLGYWLCGRLEGPNDPGRLLRGLDHGLDHGAMSLLNRRHT CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH GVILRLYLEISMFEKIGPSVSRARAAVVGAALSVAAAAHAADPATAQEALGTLSTSNTGY HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC GPVLWGMAAAAVGIMIGIKWIKRGRGAA CHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AAPSGRSACDGCARHRVAPCLGYWLCGRLEGPNDPGRLLRGLDHGLDHGAMSLLNRRHT CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH GVILRLYLEISMFEKIGPSVSRARAAVVGAALSVAAAAHAADPATAQEALGTLSTSNTGY HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC GPVLWGMAAAAVGIMIGIKWIKRGRGAA CHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA