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The map label for this gene is ppdD [C]

Identifier: 120612196

GI number: 120612196

Start: 3920510

End: 3921115

Strand: Reverse

Name: ppdD [C]

Synonym: Aave_3549

Alternate gene names: 120612196

Gene position: 3921115-3920510 (Counterclockwise)

Preceding gene: 120612197

Following gene: 120612191

Centisome position: 73.25

GC content: 63.04

Gene sequence:

>606_bases
ATGAGGAATAATCTGCACTGCGGATCGCAGGCCAGCCAGGGCCCCAGGATTGCCAGGCGGCACCGGGGGTTCACCCTGAT
CGAGCTCATGGTGACGATGGCGCTGGTGGCCGTGCTGCTGCGCATCGGCATCCCGAGCTTCGTGAGCTTCCAGCGCAATT
CCGAACTGACCTCCGCCGCCAACGGGCTGCTTGCGAGCGTCAATTCGGCCCGCACGGAGGCCATGAAGCGCAACATGAAC
GCGGGGTTGGTTCCCACCACGGGCAGTTCATGGGGAGGAGGGTGGACCGCATTCGTGGATATCGATGGCAATGGTTCCTT
CGACGCGGCCAAGGACCTGGTGGTGTCAACGCAACCGGCGCTGGCGTCTTATTTTTCCGTGACCGGTACAGGCACCGCGA
CAGGCGATACCCCCTCCATCACCTTCAACTCTTCAGGTTATGTGAAGGATTTCGGCAACGTCACCCTGGAAATCGCGCGC
AACGATCTTTCCGATGCGGCGCTGCTGGAGCAGACGCGACGGGTTGTCATCTTCAAGACGGGCCGCGTGCGCGTCTGCAA
GCCGACGTCCGCGACCGATGCCGCGTGCTCCAGCGGCGGGAGCTGA

Upstream 100 bases:

>100_bases
TCAAGTCGGACCCTGCCGTGGGTGATCTCTCTCTCACCAGTACGGGGGTCAAGTCGTGTACGGGCACGGCCAGCAGCACC
AATCCCAAGCTGTGCTGGCC

Downstream 100 bases:

>100_bases
CGATCCGCCGTCCGGCTTCTGGCGGCGGGTCTCCTCCCGCTACACCCCCCCGATCTCCCGCCAGATCGCCGACAGCGGCA
GGACCTTGTCCACGCCCCCC

Product: Tfp pilus assembly protein FimT

Products: NA

Alternate protein names: Tfp Pilus Assembly Protein FimT; Methylation

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MRNNLHCGSQASQGPRIARRHRGFTLIELMVTMALVAVLLRIGIPSFVSFQRNSELTSAANGLLASVNSARTEAMKRNMN
AGLVPTTGSSWGGGWTAFVDIDGNGSFDAAKDLVVSTQPALASYFSVTGTGTATGDTPSITFNSSGYVKDFGNVTLEIAR
NDLSDAALLEQTRRVVIFKTGRVRVCKPTSATDAACSSGGS

Sequences:

>Translated_201_residues
MRNNLHCGSQASQGPRIARRHRGFTLIELMVTMALVAVLLRIGIPSFVSFQRNSELTSAANGLLASVNSARTEAMKRNMN
AGLVPTTGSSWGGGWTAFVDIDGNGSFDAAKDLVVSTQPALASYFSVTGTGTATGDTPSITFNSSGYVKDFGNVTLEIAR
NDLSDAALLEQTRRVVIFKTGRVRVCKPTSATDAACSSGGS
>Mature_201_residues
MRNNLHCGSQASQGPRIARRHRGFTLIELMVTMALVAVLLRIGIPSFVSFQRNSELTSAANGLLASVNSARTEAMKRNMN
AGLVPTTGSSWGGGWTAFVDIDGNGSFDAAKDLVVSTQPALASYFSVTGTGTATGDTPSITFNSSGYVKDFGNVTLEIAR
NDLSDAALLEQTRRVVIFKTGRVRVCKPTSATDAACSSGGS

Specific function: Not Yet Known. [C]

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21112; Mature: 21112

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNNLHCGSQASQGPRIARRHRGFTLIELMVTMALVAVLLRIGIPSFVSFQRNSELTSAA
CCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHH
NGLLASVNSARTEAMKRNMNAGLVPTTGSSWGGGWTAFVDIDGNGSFDAAKDLVVSTQPA
HHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEEECCCCCCHHHHHEEECCCHH
LASYFSVTGTGTATGDTPSITFNSSGYVKDFGNVTLEIARNDLSDAALLEQTRRVVIFKT
HHHHEEECCCCCCCCCCCEEEECCCCCEECCCCEEEEEECCCCCHHHHHHHCCEEEEEEC
GRVRVCKPTSATDAACSSGGS
CCEEEECCCCCCCHHHCCCCC
>Mature Secondary Structure
MRNNLHCGSQASQGPRIARRHRGFTLIELMVTMALVAVLLRIGIPSFVSFQRNSELTSAA
CCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHH
NGLLASVNSARTEAMKRNMNAGLVPTTGSSWGGGWTAFVDIDGNGSFDAAKDLVVSTQPA
HHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEEECCCCCCHHHHHEEECCCHH
LASYFSVTGTGTATGDTPSITFNSSGYVKDFGNVTLEIARNDLSDAALLEQTRRVVIFKT
HHHHEEECCCCCCCCCCCEEEECCCCCEECCCCEEEEEECCCCCHHHHHHHCCEEEEEEC
GRVRVCKPTSATDAACSSGGS
CCEEEECCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA