Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is ureC
Identifier: 120612180
GI number: 120612180
Start: 3902637
End: 3904355
Strand: Direct
Name: ureC
Synonym: Aave_3529
Alternate gene names: 120612180
Gene position: 3902637-3904355 (Clockwise)
Preceding gene: 120612179
Following gene: 120612181
Centisome position: 72.91
GC content: 69.4
Gene sequence:
>1719_bases ATGGCCACCGTCTCCCGCCGCGCCTATGCGGAAATGTTCGGCCCCACCGTGGGCGACCGCGTGCGGCTGGCCGACACCGG CCTCGTCGCCGAAGTCGAGCAGGACTTCACCCTGCGCGCCGGCGGCTACGGCGAGGAAGTCAAGTTCGGCGGCGGCAAGA CCATCCGCGACGGCATGGCCCAGAGCCAGCGCACCCGTGCAGAAGGGGCGATGGACACCGTGCTCACCAACGCCCTCGTC ATCGACCACTGGGGCATCGTCAAGGCCGACATCGGCCTGAAGGACGGCCGTGTCGCCGCCATCGGCAAGGCCGGCAACCC CGACACCCAGCCCGGCGTGGACATCGTCATCGGCCCCGGCACCGAGATCATCAGTTGCGAAGGCAACATCGTCACGGCCG GCGGCATCGACAGCCACATCCACTTCATCTGCCCGCAGCAGATCGAAGAGGCGCTGGCCTCGGGCATCACCACCATGCTC GGCGGCGGCACCGGCCCGGCCACCGGCACGCTGGCCACCACCTGCACGCCCGGCCCCTGGCACATCGAGCGCATGCTGCA GGCGGCCGACGCCTTCCCCATGAACATCGGCTTCCTGGGCAAGGGCAACGCCAGCCTGCCCGCCGCATTGCACGAACAGA TCGAGGCCGGCGTGATCGGCCTCAAACTCCACGAAGACTGGGGCACCACCCCCTCGGCCATCAGCAACTGCATGGACGTG GCCGACGCCACCGACACCCAGGTGGCGATCCACTCCGACACGCTCAACGAGAGCGGCTTCGTCGAGAACACCATCGCCGC CGTGGGCGGACGCGGCATCTGCGCCTTCCACACCGAGGGCGCGGGCGGCGGCCACGCGCCGGACATCCTGCGCGTGGTGG GCGAGGACAACTTCCTGCCCTCCTCCACCAACCCCACCATGCCCTACACGCGCAACACGCTGGACGAGCACGTGGACATG CTCATGGTGTGCCACCACCTGGACGCGGCCATCGCCGAAGACCTGGCCTTCGCCGAGAGCCGCATCCGCAAGGAAACCAT CGCCGCCGAGGACATCCTGCACGACCTGGGCGCCATCAGCATGATGAGCAGCGACAGCCAGGCCATGGGCCGCGTGGGCG AGGTCATCCTGCGCACCTGGCAGACCGCCGACAAGATGAAGCAGCAGCGCGGCGCCCTGCCCGAGGACGGCGCCCGCAAC GACAACCACCGCATCAAGCGCTACGTCGCCAAATACACCATCAACCCCGCGATCGCCCACGGCATCTCCCACGACGTGGG CAGCCTGGAGGTCGGCAAGTGGGCCGACATCGTGGTCTGGAAGCCAGCCTTCTTCGGCGTGAAGCCCGCGATGGTCCTCA AGGGCGGCAGCATCGCGGTGGCCGCCATGGGCGACCCGAACGCGTCCATCCCCACGCCGCAGCCCGTGCACTACCGCCCC ATGTTCGGCGCCTTCGGCGGCTCCCTGGCCCGGTCGTCGCTCACCTTCGTCTCGCAGGCGGCCATGGCGGCCGGCGTGCG CGAGCGCTTCGGCCTGGCCAAGCAGCTGAGCGCCGTGCGCGGCATCCGCGGCGTGCGCAAGCAGCACATGGTGCACAACG GCTACACCCCGCGCATGGAGATCGACGCGCAGACCTACACCGTGCGCGCCGACGGCCAGTTGCTCACCTGCGAGTCCGCC ACCCGCCTGCCGCTGGCGCAGCGCTACTTCCTTTTCTGA
Upstream 100 bases:
>100_bases GCAGGCACTGCGGAGACCGCCCCCGGCCTGCCGCAGCAGCCCTGACCCGCCCCGCCTCTTCACGCCCCAAGCCACGCCCC CGGAAAGGCAAGACCACACC
Downstream 100 bases:
>100_bases GCCCGCCGATGAACGCGCCCACCCCAGCCTCCACGACCGCCCCGCTCCTGCGCATCCGCCTGGACGACCTGAGCGATCCG CGCATCGCCGTGTTCCTGCA
Product: urease subunit alpha
Products: NA
Alternate protein names: Urea amidohydrolase subunit alpha
Number of amino acids: Translated: 572; Mature: 571
Protein sequence:
>572_residues MATVSRRAYAEMFGPTVGDRVRLADTGLVAEVEQDFTLRAGGYGEEVKFGGGKTIRDGMAQSQRTRAEGAMDTVLTNALV IDHWGIVKADIGLKDGRVAAIGKAGNPDTQPGVDIVIGPGTEIISCEGNIVTAGGIDSHIHFICPQQIEEALASGITTML GGGTGPATGTLATTCTPGPWHIERMLQAADAFPMNIGFLGKGNASLPAALHEQIEAGVIGLKLHEDWGTTPSAISNCMDV ADATDTQVAIHSDTLNESGFVENTIAAVGGRGICAFHTEGAGGGHAPDILRVVGEDNFLPSSTNPTMPYTRNTLDEHVDM LMVCHHLDAAIAEDLAFAESRIRKETIAAEDILHDLGAISMMSSDSQAMGRVGEVILRTWQTADKMKQQRGALPEDGARN DNHRIKRYVAKYTINPAIAHGISHDVGSLEVGKWADIVVWKPAFFGVKPAMVLKGGSIAVAAMGDPNASIPTPQPVHYRP MFGAFGGSLARSSLTFVSQAAMAAGVRERFGLAKQLSAVRGIRGVRKQHMVHNGYTPRMEIDAQTYTVRADGQLLTCESA TRLPLAQRYFLF
Sequences:
>Translated_572_residues MATVSRRAYAEMFGPTVGDRVRLADTGLVAEVEQDFTLRAGGYGEEVKFGGGKTIRDGMAQSQRTRAEGAMDTVLTNALV IDHWGIVKADIGLKDGRVAAIGKAGNPDTQPGVDIVIGPGTEIISCEGNIVTAGGIDSHIHFICPQQIEEALASGITTML GGGTGPATGTLATTCTPGPWHIERMLQAADAFPMNIGFLGKGNASLPAALHEQIEAGVIGLKLHEDWGTTPSAISNCMDV ADATDTQVAIHSDTLNESGFVENTIAAVGGRGICAFHTEGAGGGHAPDILRVVGEDNFLPSSTNPTMPYTRNTLDEHVDM LMVCHHLDAAIAEDLAFAESRIRKETIAAEDILHDLGAISMMSSDSQAMGRVGEVILRTWQTADKMKQQRGALPEDGARN DNHRIKRYVAKYTINPAIAHGISHDVGSLEVGKWADIVVWKPAFFGVKPAMVLKGGSIAVAAMGDPNASIPTPQPVHYRP MFGAFGGSLARSSLTFVSQAAMAAGVRERFGLAKQLSAVRGIRGVRKQHMVHNGYTPRMEIDAQTYTVRADGQLLTCESA TRLPLAQRYFLF >Mature_571_residues ATVSRRAYAEMFGPTVGDRVRLADTGLVAEVEQDFTLRAGGYGEEVKFGGGKTIRDGMAQSQRTRAEGAMDTVLTNALVI DHWGIVKADIGLKDGRVAAIGKAGNPDTQPGVDIVIGPGTEIISCEGNIVTAGGIDSHIHFICPQQIEEALASGITTMLG GGTGPATGTLATTCTPGPWHIERMLQAADAFPMNIGFLGKGNASLPAALHEQIEAGVIGLKLHEDWGTTPSAISNCMDVA DATDTQVAIHSDTLNESGFVENTIAAVGGRGICAFHTEGAGGGHAPDILRVVGEDNFLPSSTNPTMPYTRNTLDEHVDML MVCHHLDAAIAEDLAFAESRIRKETIAAEDILHDLGAISMMSSDSQAMGRVGEVILRTWQTADKMKQQRGALPEDGARND NHRIKRYVAKYTINPAIAHGISHDVGSLEVGKWADIVVWKPAFFGVKPAMVLKGGSIAVAAMGDPNASIPTPQPVHYRPM FGAFGGSLARSSLTFVSQAAMAAGVRERFGLAKQLSAVRGIRGVRKQHMVHNGYTPRMEIDAQTYTVRADGQLLTCESAT RLPLAQRYFLF
Specific function: Unknown
COG id: COG0804
COG function: function code E; Urea amidohydrolase (urease) alpha subunit
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 urease domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): URE1_ACIAC (A1TSZ6)
Other databases:
- EMBL: CP000512 - RefSeq: YP_971858.1 - ProteinModelPortal: A1TSZ6 - SMR: A1TSZ6 - STRING: A1TSZ6 - MEROPS: M38.982 - GeneID: 4667450 - GenomeReviews: CP000512_GR - KEGG: aav:Aave_3529 - NMPDR: fig|397945.5.peg.3016 - eggNOG: COG0804 - HOGENOM: HBG357507 - OMA: TIHAFHT - ProtClustDB: PRK13207 - BioCyc: AAVE397945:AAVE_3529-MONOMER - GO: GO:0005737 - HAMAP: MF_01953 - InterPro: IPR006680 - InterPro: IPR011059 - InterPro: IPR011612 - InterPro: IPR005848 - InterPro: IPR017951 - InterPro: IPR017950 - PRINTS: PR01752 - TIGRFAMs: TIGR01792
Pfam domain/function: PF01979 Amidohydro_1; PF00449 Urease_alpha; SSF51338 Metalo_hydrolase
EC number: =3.5.1.5
Molecular weight: Translated: 60788; Mature: 60657
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: PS01120 UREASE_1; PS00145 UREASE_2; PS51368 UREASE_3
Important sites: ACT_SITE 325-325 BINDING 224-224
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVSRRAYAEMFGPTVGDRVRLADTGLVAEVEQDFTLRAGGYGEEVKFGGGKTIRDGMA CCCCCHHHHHHHHCCCCCCEEEEECCCCEEECCCCEEEECCCCCCEEEECCCCHHHHHHH QSQRTRAEGAMDTVLTNALVIDHWGIVKADIGLKDGRVAAIGKAGNPDTQPGVDIVIGPG HHHHHHHHHHHHHHHHHEEEEECCCEEEECCCCCCCCEEEEECCCCCCCCCCCEEEECCC TEIISCEGNIVTAGGIDSHIHFICPQQIEEALASGITTMLGGGTGPATGTLATTCTPGPW CEEEEECCCEEEECCCCCCEEEECHHHHHHHHHHCHHHHHCCCCCCCCCCEEEECCCCHH HIERMLQAADAFPMNIGFLGKGNASLPAALHEQIEAGVIGLKLHEDWGTTPSAISNCMDV HHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHH ADATDTQVAIHSDTLNESGFVENTIAAVGGRGICAFHTEGAGGGHAPDILRVVGEDNFLP CCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCC SSTNPTMPYTRNTLDEHVDMLMVCHHLDAAIAEDLAFAESRIRKETIAAEDILHDLGAIS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MMSSDSQAMGRVGEVILRTWQTADKMKQQRGALPEDGARNDNHRIKRYVAKYTINPAIAH HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHH GISHDVGSLEVGKWADIVVWKPAFFGVKPAMVLKGGSIAVAAMGDPNASIPTPQPVHYRP CCCCCCCCEECCCCEEEEEECCHHHCCCCEEEEECCCEEEEEECCCCCCCCCCCCCEECC MFGAFGGSLARSSLTFVSQAAMAAGVRERFGLAKQLSAVRGIRGVRKQHMVHNGYTPRME HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE IDAQTYTVRADGQLLTCESATRLPLAQRYFLF ECCEEEEEEECCCEEEECCCCCCCHHHHHHCC >Mature Secondary Structure ATVSRRAYAEMFGPTVGDRVRLADTGLVAEVEQDFTLRAGGYGEEVKFGGGKTIRDGMA CCCCHHHHHHHHCCCCCCEEEEECCCCEEECCCCEEEECCCCCCEEEECCCCHHHHHHH QSQRTRAEGAMDTVLTNALVIDHWGIVKADIGLKDGRVAAIGKAGNPDTQPGVDIVIGPG HHHHHHHHHHHHHHHHHEEEEECCCEEEECCCCCCCCEEEEECCCCCCCCCCCEEEECCC TEIISCEGNIVTAGGIDSHIHFICPQQIEEALASGITTMLGGGTGPATGTLATTCTPGPW CEEEEECCCEEEECCCCCCEEEECHHHHHHHHHHCHHHHHCCCCCCCCCCEEEECCCCHH HIERMLQAADAFPMNIGFLGKGNASLPAALHEQIEAGVIGLKLHEDWGTTPSAISNCMDV HHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHH ADATDTQVAIHSDTLNESGFVENTIAAVGGRGICAFHTEGAGGGHAPDILRVVGEDNFLP CCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCC SSTNPTMPYTRNTLDEHVDMLMVCHHLDAAIAEDLAFAESRIRKETIAAEDILHDLGAIS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MMSSDSQAMGRVGEVILRTWQTADKMKQQRGALPEDGARNDNHRIKRYVAKYTINPAIAH HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHH GISHDVGSLEVGKWADIVVWKPAFFGVKPAMVLKGGSIAVAAMGDPNASIPTPQPVHYRP CCCCCCCCEECCCCEEEEEECCHHHCCCCEEEEECCCEEEEEECCCCCCCCCCCCCEECC MFGAFGGSLARSSLTFVSQAAMAAGVRERFGLAKQLSAVRGIRGVRKQHMVHNGYTPRME HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE IDAQTYTVRADGQLLTCESATRLPLAQRYFLF ECCEEEEEEECCCEEEECCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA