Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is hupE [H]
Identifier: 120612178
GI number: 120612178
Start: 3901611
End: 3902204
Strand: Direct
Name: hupE [H]
Synonym: Aave_3527
Alternate gene names: 120612178
Gene position: 3901611-3902204 (Clockwise)
Preceding gene: 120612177
Following gene: 120612179
Centisome position: 72.89
GC content: 77.95
Gene sequence:
>594_bases ATGCGCATCGCCCGTTCCCTGTTCCCCGCCCTGCTGGCCGCCGCCGCATTGCCGGCACTGGCCCACACCGGCGCCGATGC CGGCCACCACCACGGCGTCGCCGCCGGGTTCCTGCACCCGCTGACCGGCATGGACCATCTGGCCGCCATGGTGGCCGTGG GCCTCTGGAGCGCCCTGGCCGCACGCAGCCGCCGCGAACTGCTGGCGGCGCCCCTGGGCTTCGCCGGCATGCTGCTCGTG GGCGCGCTGGCGGGGCTGGCGGGCCTGTCGCTGCCTGCGGTGGAGCCCATGATCGCCGCCTCCCTGCTGGTGCTGGGCCT GCTGGTGGCCACGCAGCGCCGCCTGCCCGCGCCCGCCGCCGCGGCGCTGGTCGGTGTTTTCGCGGTCTTCCACGGCATCG CCCATGGCCACGAACTGGCCGGCGGCGGCGCAGCCCTGCCCACGCTGGCCGGCATGCTCGCCGCCACCGTGGCCCTGCAT GCCGGCGGCATCGGCCTGGGCGTGGCCCTGCGCGGCGCCAACCGCTGGCTGCCGCGCGCGGCCGGCGCCGCCGTCGGCCT CTTCGGCCTCGCCCTGCTGGGCGGCCTGGCCTGA
Upstream 100 bases:
>100_bases GTGGAAGCCACTTTCCCCGACGGCACCAAGCTCGTCACCGTCCACCAGCCCATCGCCTGACGCGGCCCGCCGCGCGCCCT TTCCCTCCCGGAGCATCCCC
Downstream 100 bases:
>100_bases CCGCAAACCGAGGCAAGGAGCGCACCATGGTCCCGGGCGAACTGCTGGTCGATGACGGCGAGCACCCACTCATCCCCTGC CGGCGCACCGTCACCCTGGT
Product: HupE/UreJ protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MRIARSLFPALLAAAALPALAHTGADAGHHHGVAAGFLHPLTGMDHLAAMVAVGLWSALAARSRRELLAAPLGFAGMLLV GALAGLAGLSLPAVEPMIAASLLVLGLLVATQRRLPAPAAAALVGVFAVFHGIAHGHELAGGGAALPTLAGMLAATVALH AGGIGLGVALRGANRWLPRAAGAAVGLFGLALLGGLA
Sequences:
>Translated_197_residues MRIARSLFPALLAAAALPALAHTGADAGHHHGVAAGFLHPLTGMDHLAAMVAVGLWSALAARSRRELLAAPLGFAGMLLV GALAGLAGLSLPAVEPMIAASLLVLGLLVATQRRLPAPAAAALVGVFAVFHGIAHGHELAGGGAALPTLAGMLAATVALH AGGIGLGVALRGANRWLPRAAGAAVGLFGLALLGGLA >Mature_197_residues MRIARSLFPALLAAAALPALAHTGADAGHHHGVAAGFLHPLTGMDHLAAMVAVGLWSALAARSRRELLAAPLGFAGMLLV GALAGLAGLSLPAVEPMIAASLLVLGLLVATQRRLPAPAAAALVGVFAVFHGIAHGHELAGGGAALPTLAGMLAATVALH AGGIGLGVALRGANRWLPRAAGAAVGLFGLALLGGLA
Specific function: Needed for full hydrogenase activity [H]
COG id: COG2370
COG function: function code O; Hydrogenase/urease accessory protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007038 [H]
Pfam domain/function: PF04955 HupE_UreJ [H]
EC number: NA
Molecular weight: Translated: 19200; Mature: 19200
Theoretical pI: Translated: 12.32; Mature: 12.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIARSLFPALLAAAALPALAHTGADAGHHHGVAAGFLHPLTGMDHLAAMVAVGLWSALA CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH ARSRRELLAAPLGFAGMLLVGALAGLAGLSLPAVEPMIAASLLVLGLLVATQRRLPAPAA HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH AALVGVFAVFHGIAHGHELAGGGAALPTLAGMLAATVALHAGGIGLGVALRGANRWLPRA HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHCCHH AGAAVGLFGLALLGGLA HHHHHHHHHHHHHHCCC >Mature Secondary Structure MRIARSLFPALLAAAALPALAHTGADAGHHHGVAAGFLHPLTGMDHLAAMVAVGLWSALA CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH ARSRRELLAAPLGFAGMLLVGALAGLAGLSLPAVEPMIAASLLVLGLLVATQRRLPAPAA HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH AALVGVFAVFHGIAHGHELAGGGAALPTLAGMLAATVALHAGGIGLGVALRGANRWLPRA HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHCCHH AGAAVGLFGLALLGGLA HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1597428 [H]