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The map label for this gene is 120612171

Identifier: 120612171

GI number: 120612171

Start: 3892196

End: 3892666

Strand: Reverse

Name: 120612171

Synonym: Aave_3520

Alternate gene names: NA

Gene position: 3892666-3892196 (Counterclockwise)

Preceding gene: 120612174

Following gene: 120612170

Centisome position: 72.72

GC content: 66.88

Gene sequence:

>471_bases
ATGGAGTATTTCATTGCCAAGTGGCTGCACATTCTCTCGTCCACGGTCCTGTTCGGCACCGGTATCGGAACGGCGTTCTA
CCTGCTGGTCGCCATGCTGGGCCGCGACCTGCGCTTCATCGTGCCGATGACGCGCTGGGTGGTGCGGGCCGACTGGCTGT
TCACCGGAACCACGGCGGTGCTGCAGCCGCTTACCGGCTGGTGGCTGGTGCACCTGATGGGGCTGCCCTGGAGCACGCCC
TGGCTGGCGCGTTCGCTGGGCCTCTACGTCCTGGCCATGGCCTGCTGGCTGCCGGTGGTGTGGATCCAGATGCGCATGCG
CGACGAGGCGGTGCGTGCGCAGGCCGGCCACCTGGATGCGTGGCCCGCGCTGTGGCGCTTCTTCATCGCCTGGGTGGTGC
TGGGGGTGCCGGCGCTGGTGGCTTTCCTGGCCATCTTCTGGTTCATGGTGAGCAAGCCGGCAGGGATATAG

Upstream 100 bases:

>100_bases
CGGGGAAGGGGACGACGCATCATCGCCAACCGCGCGCCGGTCCGCGTGTCGGATGGCACGGCAAACGCATGCAGGCGCAT
GCATTCACGGGAAGGTTTCC

Downstream 100 bases:

>100_bases
TCCTTCAGCGCCAGGGCCCCATGCAGGCCATGCTCGACGGCGATGCGCAGGGCGCACGCCAATGTACCGGCGACCACCTC
GAGCACGTGCGCACCACCAT

Product: integral membrane protein

Products: NA

Alternate protein names: Integral Membrane Protein-Like Protein; Transmembrane Protein; Integral Membrane Protein-Like; Integral Membrane-Like Protein; Exonuclease VII Large Subunit

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MEYFIAKWLHILSSTVLFGTGIGTAFYLLVAMLGRDLRFIVPMTRWVVRADWLFTGTTAVLQPLTGWWLVHLMGLPWSTP
WLARSLGLYVLAMACWLPVVWIQMRMRDEAVRAQAGHLDAWPALWRFFIAWVVLGVPALVAFLAIFWFMVSKPAGI

Sequences:

>Translated_156_residues
MEYFIAKWLHILSSTVLFGTGIGTAFYLLVAMLGRDLRFIVPMTRWVVRADWLFTGTTAVLQPLTGWWLVHLMGLPWSTP
WLARSLGLYVLAMACWLPVVWIQMRMRDEAVRAQAGHLDAWPALWRFFIAWVVLGVPALVAFLAIFWFMVSKPAGI
>Mature_156_residues
MEYFIAKWLHILSSTVLFGTGIGTAFYLLVAMLGRDLRFIVPMTRWVVRADWLFTGTTAVLQPLTGWWLVHLMGLPWSTP
WLARSLGLYVLAMACWLPVVWIQMRMRDEAVRAQAGHLDAWPALWRFFIAWVVLGVPALVAFLAIFWFMVSKPAGI

Specific function: Unknown

COG id: COG5528

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17853; Mature: 17853

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYFIAKWLHILSSTVLFGTGIGTAFYLLVAMLGRDLRFIVPMTRWVVRADWLFTGTTAV
CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LQPLTGWWLVHLMGLPWSTPWLARSLGLYVLAMACWLPVVWIQMRMRDEAVRAQAGHLDA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
WPALWRFFIAWVVLGVPALVAFLAIFWFMVSKPAGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEYFIAKWLHILSSTVLFGTGIGTAFYLLVAMLGRDLRFIVPMTRWVVRADWLFTGTTAV
CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LQPLTGWWLVHLMGLPWSTPWLARSLGLYVLAMACWLPVVWIQMRMRDEAVRAQAGHLDA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
WPALWRFFIAWVVLGVPALVAFLAIFWFMVSKPAGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA