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The map label for this gene is bioC [C]

Identifier: 120612096

GI number: 120612096

Start: 3802925

End: 3804235

Strand: Direct

Name: bioC [C]

Synonym: Aave_3443

Alternate gene names: 120612096

Gene position: 3802925-3804235 (Clockwise)

Preceding gene: 120612095

Following gene: 120612102

Centisome position: 71.05

GC content: 69.87

Gene sequence:

>1311_bases
ATGAGCGCCACTGCCACCCCCACCGACCCGAACCGCCAACACCTCGAAACGGCGCGCGAGCAGATCGCGCGCGGCGACCT
GCAGCAGGCCGCGCTCACGCTGAACAAGGCCCAGCGCACCCAGCCCAACGACCCGCGCGTGTTCATGCTGGCGGGCCTCA
TGGCCGAGAAGGCGGGCAATATCCCGAAGGCCTTCGACGGGCTGCGCCGCGCCGTGACGCTGGCGCCCGACTGGGGCCCG
GGCCAGCTGGAGCTGGCGCTGCTGCACGCGCGCCAGAACCAGTTGCGCGAAGCCGTGGAGCTGGCCGAGAAGCTGGCCGC
GCGCGAGCCGCGCAACCTGGTGGTGCTCGCCGGCGTGGTGGACATCGCCCACCGCGCGGGGCACCTGGAGATGGCCGTGC
GGCACCTGCGCCGCGGCCTGGAGATGGTGCCCGGCGACGTGCAGTTGCGCCGCCTGCTCGCCCGCGACCTGAGCGACCTG
GGCCAACACGCCGAGTCGCTGCAGGTCTGGGGCGCGCTGATCGACGAGAACCCGCAGGACACCGAGGCCCGCCTGGGCCG
GGTGAAGGCCTGCATCGCGGCCGGCACGCCGGCGCAGGCGGTGGCCGACACGACGGCGCTGATGGAACTCGCGCCCGGTG
ATTCCGTGGTGGCCTACTACACGGCCATCGCGCACGGCGTGACGCCGCAGCACCAGCCGCCGGAACTGCACCGCGCGCTG
TTCGACAACCTCGCAAGCCTCTACGACCAGCACATGGTCGCCGGACTGAAGTACAAGCTGCCGAAGATCGCGGCCGAAAA
GATCCTCGCACGCTACCCCGACAAGCACATGAACGTGCTGGACCTGGGCTGCGGCACGGGACTGCTGGGCGTGTGCCTGG
GCCGCATCGACGGCTTCCTCATCGGCGTGGACATCTCCATGAAGATGATCGAGCAGGCGGCACGCCACAACGTGTACGAC
CGCTTCCACAATGCCAACCTGCTGGACGCGCTGCGCGACACGCCCTCCTCCACCTACGACGTGGTGGCGGCGCTGGATGT
CTTCATCTACGCGGGCGACCTGTCGGACACCGTGCCCGACGCCTTCCGCCTGATCGTGCCGAACGGCGACTTCCTCTTCT
CGTGCGAAGCCGCTCCCGAAGAGGGCCCGGACCTGGTGCTGCAGGCCAGTGGCCGCTACGCCCACAAGCGCAGCCACGCC
CTGGCCGTGTGCCGGGCGGCGGGCTTCACGTCGGTGGAGATCGAGGATCTCCTGCTGCGCTACGACGGCAATGAGCCCGT
GCAGGGCTTCCTGGTAACCGCAAGGAAATAA

Upstream 100 bases:

>100_bases
CTGAAACCCGCGGGACGCGCCGTGGAAGGCGAATCCGGGATAATCCCGTGATTCCCTGCAGCCGGGCCGAGCGCCCGGCT
CTCTATTTTCAGCACGAGAC

Downstream 100 bases:

>100_bases
CGGCCCCCCCTGAGGCGCCTGCGGCGCCTTCCCCCCGGGGGGACGACGCTGGCAGCCCGGCGGAGCCGGTTCTGCGGCGT
CTGCTGACATGGCCTGCTCC

Product: type 12 methyltransferase

Products: NA

Alternate protein names: Methyltransferase; Methyltransferase Protein; 3-Demethylubiquinone-9 3-Methyltransferase; SAM-Dependent Methyltransferase; TPR Repeat-Containing Protein; SAM-Dependent Methyltransferases; Protein With TPR Motifs; Two Domain Fusion Protein; Methyltransferase Domain Family Protein

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MSATATPTDPNRQHLETAREQIARGDLQQAALTLNKAQRTQPNDPRVFMLAGLMAEKAGNIPKAFDGLRRAVTLAPDWGP
GQLELALLHARQNQLREAVELAEKLAAREPRNLVVLAGVVDIAHRAGHLEMAVRHLRRGLEMVPGDVQLRRLLARDLSDL
GQHAESLQVWGALIDENPQDTEARLGRVKACIAAGTPAQAVADTTALMELAPGDSVVAYYTAIAHGVTPQHQPPELHRAL
FDNLASLYDQHMVAGLKYKLPKIAAEKILARYPDKHMNVLDLGCGTGLLGVCLGRIDGFLIGVDISMKMIEQAARHNVYD
RFHNANLLDALRDTPSSTYDVVAALDVFIYAGDLSDTVPDAFRLIVPNGDFLFSCEAAPEEGPDLVLQASGRYAHKRSHA
LAVCRAAGFTSVEIEDLLLRYDGNEPVQGFLVTARK

Sequences:

>Translated_436_residues
MSATATPTDPNRQHLETAREQIARGDLQQAALTLNKAQRTQPNDPRVFMLAGLMAEKAGNIPKAFDGLRRAVTLAPDWGP
GQLELALLHARQNQLREAVELAEKLAAREPRNLVVLAGVVDIAHRAGHLEMAVRHLRRGLEMVPGDVQLRRLLARDLSDL
GQHAESLQVWGALIDENPQDTEARLGRVKACIAAGTPAQAVADTTALMELAPGDSVVAYYTAIAHGVTPQHQPPELHRAL
FDNLASLYDQHMVAGLKYKLPKIAAEKILARYPDKHMNVLDLGCGTGLLGVCLGRIDGFLIGVDISMKMIEQAARHNVYD
RFHNANLLDALRDTPSSTYDVVAALDVFIYAGDLSDTVPDAFRLIVPNGDFLFSCEAAPEEGPDLVLQASGRYAHKRSHA
LAVCRAAGFTSVEIEDLLLRYDGNEPVQGFLVTARK
>Mature_435_residues
SATATPTDPNRQHLETAREQIARGDLQQAALTLNKAQRTQPNDPRVFMLAGLMAEKAGNIPKAFDGLRRAVTLAPDWGPG
QLELALLHARQNQLREAVELAEKLAAREPRNLVVLAGVVDIAHRAGHLEMAVRHLRRGLEMVPGDVQLRRLLARDLSDLG
QHAESLQVWGALIDENPQDTEARLGRVKACIAAGTPAQAVADTTALMELAPGDSVVAYYTAIAHGVTPQHQPPELHRALF
DNLASLYDQHMVAGLKYKLPKIAAEKILARYPDKHMNVLDLGCGTGLLGVCLGRIDGFLIGVDISMKMIEQAARHNVYDR
FHNANLLDALRDTPSSTYDVVAALDVFIYAGDLSDTVPDAFRLIVPNGDFLFSCEAAPEEGPDLVLQASGRYAHKRSHAL
AVCRAAGFTSVEIEDLLLRYDGNEPVQGFLVTARK

Specific function: Bioc Is Involved In An Early, But Chemically Unexplored, Step In The Conversion Of Pimelic Acid To Biotin. [C]

COG id: COG4976

COG function: function code R; Predicted methyltransferase (contains TPR repeat)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47500; Mature: 47369

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATATPTDPNRQHLETAREQIARGDLQQAALTLNKAQRTQPNDPRVFMLAGLMAEKAGN
CCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHCCC
IPKAFDGLRRAVTLAPDWGPGQLELALLHARQNQLREAVELAEKLAAREPRNLVVLAGVV
CCHHHHHHHHEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHH
DIAHRAGHLEMAVRHLRRGLEMVPGDVQLRRLLARDLSDLGQHAESLQVWGALIDENPQD
HHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TEARLGRVKACIAAGTPAQAVADTTALMELAPGDSVVAYYTAIAHGVTPQHQPPELHRAL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH
FDNLASLYDQHMVAGLKYKLPKIAAEKILARYPDKHMNVLDLGCGTGLLGVCLGRIDGFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHCCEE
IGVDISMKMIEQAARHNVYDRFHNANLLDALRDTPSSTYDVVAALDVFIYAGDLSDTVPD
EEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHEECCCCCCCCC
AFRLIVPNGDFLFSCEAAPEEGPDLVLQASGRYAHKRSHALAVCRAAGFTSVEIEDLLLR
CEEEEECCCCEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEHHHHHEE
YDGNEPVQGFLVTARK
ECCCCCCEEEEEEECC
>Mature Secondary Structure 
SATATPTDPNRQHLETAREQIARGDLQQAALTLNKAQRTQPNDPRVFMLAGLMAEKAGN
CCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHCCC
IPKAFDGLRRAVTLAPDWGPGQLELALLHARQNQLREAVELAEKLAAREPRNLVVLAGVV
CCHHHHHHHHEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHH
DIAHRAGHLEMAVRHLRRGLEMVPGDVQLRRLLARDLSDLGQHAESLQVWGALIDENPQD
HHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TEARLGRVKACIAAGTPAQAVADTTALMELAPGDSVVAYYTAIAHGVTPQHQPPELHRAL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH
FDNLASLYDQHMVAGLKYKLPKIAAEKILARYPDKHMNVLDLGCGTGLLGVCLGRIDGFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHCCEE
IGVDISMKMIEQAARHNVYDRFHNANLLDALRDTPSSTYDVVAALDVFIYAGDLSDTVPD
EEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHEECCCCCCCCC
AFRLIVPNGDFLFSCEAAPEEGPDLVLQASGRYAHKRSHALAVCRAAGFTSVEIEDLLLR
CEEEEECCCCEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEHHHHHEE
YDGNEPVQGFLVTARK
ECCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA