Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612084
Identifier: 120612084
GI number: 120612084
Start: 3789768
End: 3790235
Strand: Direct
Name: 120612084
Synonym: Aave_3431
Alternate gene names: NA
Gene position: 3789768-3790235 (Clockwise)
Preceding gene: 120612082
Following gene: 120612087
Centisome position: 70.8
GC content: 74.15
Gene sequence:
>468_bases ATGCCGCACGCCACACGCCCAGCCCCTTGCGCATCCCCTGCTGTCAGCCCCCCTGTTCCCGCGGCCACGCAACTGTCCGT GCGCCCTGGCCAGACGCTGCTGGTCTGCCTGCCGCCCGGCGCTTCGCTGGTGGTGGAGCATGGCTGCCTCGCGTTGCGGG CCGGTCCGGTCGTGTGGGGGCAGGTGCTGGCATCCCAGGCCCGCCTCGGGACGCTGGAAGCCGGGCAATGCCGGACCGGC GCGGCGGAGTCCACGGAGTGGATGGAAGTGTCCAACCCGGGGCATACGACGGCCCATGCCAAGCTGCTGGAGCCTGCCCC CGCCCTGTCATCGCTGGCGGGGCTGGTCAGGGCCTGCCTGAACCGGCTGGGCGGCGGGATGCGCACCCTGCGGGCGCATG GAAGGCCGAGGCCCGGCACGCCGGACCACGGCCAGCGGGCGGGGGTCCATGCCACCACGGCACGGTGA
Upstream 100 bases:
>100_bases ACTGTTCTCCTTGCCCTCCGGTCCGCCTGTGCCTGCCCCGGCATCCGGGTTCTTCCTAGGATGAAGCCCTGTTCCGACGC ATCCGCCCCCAGGAGAAACC
Downstream 100 bases:
>100_bases TGGCGAACGCCGCCTGTCGTGCCGGCCGCTGCCGCAGCCCGCCCCGGCTCCAGTCAGCTCAGGCCTGCGCGGCCCGCAGC CGCAGCGAGAAATCCCGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MPHATRPAPCASPAVSPPVPAATQLSVRPGQTLLVCLPPGASLVVEHGCLALRAGPVVWGQVLASQARLGTLEAGQCRTG AAESTEWMEVSNPGHTTAHAKLLEPAPALSSLAGLVRACLNRLGGGMRTLRAHGRPRPGTPDHGQRAGVHATTAR
Sequences:
>Translated_155_residues MPHATRPAPCASPAVSPPVPAATQLSVRPGQTLLVCLPPGASLVVEHGCLALRAGPVVWGQVLASQARLGTLEAGQCRTG AAESTEWMEVSNPGHTTAHAKLLEPAPALSSLAGLVRACLNRLGGGMRTLRAHGRPRPGTPDHGQRAGVHATTAR >Mature_154_residues PHATRPAPCASPAVSPPVPAATQLSVRPGQTLLVCLPPGASLVVEHGCLALRAGPVVWGQVLASQARLGTLEAGQCRTGA AESTEWMEVSNPGHTTAHAKLLEPAPALSSLAGLVRACLNRLGGGMRTLRAHGRPRPGTPDHGQRAGVHATTAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15855; Mature: 15724
Theoretical pI: Translated: 11.00; Mature: 11.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHATRPAPCASPAVSPPVPAATQLSVRPGQTLLVCLPPGASLVVEHGCLALRAGPVVWG CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCEEEECCEEEEECCCHHHH QVLASQARLGTLEAGQCRTGAAESTEWMEVSNPGHTTAHAKLLEPAPALSSLAGLVRACL HHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCCHHHHHHHHHHHHHH NRLGGGMRTLRAHGRPRPGTPDHGQRAGVHATTAR HHHCCCCEEHHHCCCCCCCCCCCCCCCCCEECCCC >Mature Secondary Structure PHATRPAPCASPAVSPPVPAATQLSVRPGQTLLVCLPPGASLVVEHGCLALRAGPVVWG CCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCEEEECCEEEEECCCHHHH QVLASQARLGTLEAGQCRTGAAESTEWMEVSNPGHTTAHAKLLEPAPALSSLAGLVRACL HHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCCHHHHHHHHHHHHHH NRLGGGMRTLRAHGRPRPGTPDHGQRAGVHATTAR HHHCCCCEEHHHCCCCCCCCCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA