Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is mhpD [H]
Identifier: 120612070
GI number: 120612070
Start: 3773155
End: 3774024
Strand: Reverse
Name: mhpD [H]
Synonym: Aave_3417
Alternate gene names: 120612070
Gene position: 3774024-3773155 (Counterclockwise)
Preceding gene: 120612072
Following gene: 120612069
Centisome position: 70.51
GC content: 71.95
Gene sequence:
>870_bases ATGGCCCTGCAGCAAACCCTCATCGCGGCGCTGGCCGCCGTCGCCTGCGTTACAGGAGCGCGGGCCGCGTGCCTGGACGA TGCGCAGGTGGCCGATCTCGCGGCGCACTACATGGCCCGCACGCCCGCGGCCAATCCGCCGCCCATGGACGCCGCCGATG CCGCCTGCACCCGCGGCAAGTTCAATGCGCTGCTGGAGCAGCGCCTGGGCCGGCCCGTCGGCTACAAGGCCGGCCTCACC AACCCGGCGGTACAGCAGCGCTTCCGTACGGACCAGCCCGTGTGGGGCCGCCTCTATCCGGGCATGGTGCTACCCTCCGG CAGCACCGTGGATGCTGCCTTCGGTGCACGGCCGCTCTATGAAGCCGACATGCTGGTTCGCGTGAAGAGCACAGCCGTCA ACCACGCGCGCACGCCGCTGGAGGTACTGGACGCCATCGACCAGGTGATTCCCTTCATCGAACTGCCCGACCTGCTGGTG CAGGTGCCGCCCCAGCTCGACGGGGCGGGCGTGGCTGCGATCAACGTGGGTGCGCGCCTGGGCGTGGCCGGCACGCCTAT CGCCGTGCCGGCGCTGCGGGCCGAGCGCTACGCGATGCTCGATGCCCTGGCCGCGATGACGGTCACGCTCACCGACGGCA CGGGCGCCAGGCTCGGCGGCGGCCGCGGCAGCGACATCCTGGGGCATCCGCTGCAGGCCGTGGTGTGGCTGGCCGGTGCG CTGCAGAAGGAAGACGCCGCGCTGAAGCCGGGCGACCTTGTCAGCCTGGGCTCGTTCTCCGCATTGCTGCCGCCGCGGCC GGGCCTTGCGGTGACGGCCACGTTCGCCGGACTGCCGGGGGCCGCGCCCGTGGAAGTGCGTTTCAGGTAA
Upstream 100 bases:
>100_bases TGTAGTGGATGAGGGCCATGGTGGTGATGGGGGTTGCCAGGATGCGCGCCCTGGCGTATTGGTGGTCTGATCACGCCAAT CTACAACCCCGGAGCTTTCC
Downstream 100 bases:
>100_bases GAAGCTATGGCCGCGGCTGCGTCCTGCGCCCCGGTCGCGCAGGGCACTGCAGGCGGCACCGGTTTCGGGGATGATCGGCG ATGCGCCGCAGTGCGTGTTC
Product: hydratase/decarboxylase
Products: NA
Alternate protein names: 2-hydroxypentadienoic acid hydratase [H]
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MALQQTLIAALAAVACVTGARAACLDDAQVADLAAHYMARTPAANPPPMDAADAACTRGKFNALLEQRLGRPVGYKAGLT NPAVQQRFRTDQPVWGRLYPGMVLPSGSTVDAAFGARPLYEADMLVRVKSTAVNHARTPLEVLDAIDQVIPFIELPDLLV QVPPQLDGAGVAAINVGARLGVAGTPIAVPALRAERYAMLDALAAMTVTLTDGTGARLGGGRGSDILGHPLQAVVWLAGA LQKEDAALKPGDLVSLGSFSALLPPRPGLAVTATFAGLPGAAPVEVRFR
Sequences:
>Translated_289_residues MALQQTLIAALAAVACVTGARAACLDDAQVADLAAHYMARTPAANPPPMDAADAACTRGKFNALLEQRLGRPVGYKAGLT NPAVQQRFRTDQPVWGRLYPGMVLPSGSTVDAAFGARPLYEADMLVRVKSTAVNHARTPLEVLDAIDQVIPFIELPDLLV QVPPQLDGAGVAAINVGARLGVAGTPIAVPALRAERYAMLDALAAMTVTLTDGTGARLGGGRGSDILGHPLQAVVWLAGA LQKEDAALKPGDLVSLGSFSALLPPRPGLAVTATFAGLPGAAPVEVRFR >Mature_288_residues ALQQTLIAALAAVACVTGARAACLDDAQVADLAAHYMARTPAANPPPMDAADAACTRGKFNALLEQRLGRPVGYKAGLTN PAVQQRFRTDQPVWGRLYPGMVLPSGSTVDAAFGARPLYEADMLVRVKSTAVNHARTPLEVLDAIDQVIPFIELPDLLVQ VPPQLDGAGVAAINVGARLGVAGTPIAVPALRAERYAMLDALAAMTVTLTDGTGARLGGGRGSDILGHPLQAVVWLAGAL QKEDAALKPGDLVSLGSFSALLPPRPGLAVTATFAGLPGAAPVEVRFR
Specific function: Catalyzes the conversion of 2-hydroxypentadienoic acid (enolic form of 2-oxopent-4-enoate) to 4-hydroxy-2-ketopentanoic acid [H]
COG id: COG3971
COG function: function code Q; 2-keto-4-pentenoate hydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hydratase/decarboxylase family. MhpD subfamily [H]
Homologues:
Organism=Escherichia coli, GI87081722, Length=236, Percent_Identity=28.8135593220339, Blast_Score=72, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002529 - InterPro: IPR011234 [H]
Pfam domain/function: PF01557 FAA_hydrolase [H]
EC number: =4.2.1.80 [H]
Molecular weight: Translated: 29833; Mature: 29702
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALQQTLIAALAAVACVTGARAACLDDAQVADLAAHYMARTPAANPPPMDAADAACTRGK CCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH FNALLEQRLGRPVGYKAGLTNPAVQQRFRTDQPVWGRLYPGMVLPSGSTVDAAFGARPLY HHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCHHCCCCEECCCCCCCCHHHCCCCCC EADMLVRVKSTAVNHARTPLEVLDAIDQVIPFIELPDLLVQVPPQLDGAGVAAINVGARL CCHHEEEEHHHHHHHCCCHHHHHHHHHHHHCHHCCCHHHHCCCCCCCCCCEEEEECCCCC GVAGTPIAVPALRAERYAMLDALAAMTVTLTDGTGARLGGGRGSDILGHPLQAVVWLAGA CCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH LQKEDAALKPGDLVSLGSFSALLPPRPGLAVTATFAGLPGAAPVEVRFR HHCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEC >Mature Secondary Structure ALQQTLIAALAAVACVTGARAACLDDAQVADLAAHYMARTPAANPPPMDAADAACTRGK CHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH FNALLEQRLGRPVGYKAGLTNPAVQQRFRTDQPVWGRLYPGMVLPSGSTVDAAFGARPLY HHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCHHCCCCEECCCCCCCCHHHCCCCCC EADMLVRVKSTAVNHARTPLEVLDAIDQVIPFIELPDLLVQVPPQLDGAGVAAINVGARL CCHHEEEEHHHHHHHCCCHHHHHHHHHHHHCHHCCCHHHHCCCCCCCCCCEEEEECCCCC GVAGTPIAVPALRAERYAMLDALAAMTVTLTDGTGARLGGGRGSDILGHPLQAVVWLAGA CCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH LQKEDAALKPGDLVSLGSFSALLPPRPGLAVTATFAGLPGAAPVEVRFR HHCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA