Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is yceG [C]
Identifier: 120612066
GI number: 120612066
Start: 3768959
End: 3769963
Strand: Reverse
Name: yceG [C]
Synonym: Aave_3413
Alternate gene names: 120612066
Gene position: 3769963-3768959 (Counterclockwise)
Preceding gene: 120612068
Following gene: 120612065
Centisome position: 70.43
GC content: 71.94
Gene sequence:
>1005_bases GTGGCCTTCGCGGCGGCCGGCCTGGGTTTCTGGTGGCTCCACCATCCGCTGCCGCAGCGAGCGGCCGCGGGCGCCGCCAC GGCCGGGGGCACCCCCGGCGTGCTGGAGCTCGAGATCGAGCCCGGCACCACGCCGCGCGGTGTCGCCGTGGCCGCCGTGC AGGCCGGCGTGGATACCGATCCGCGCCTTCTCTATGCCTGGTTCCGCCTGTCGGGCAAGGACCGGCTGATCAAGGCCGGC AACTATGAGATCCCGCCGGGCACCACCCCCTTCGGCCTGCTGCAGAAACTCGTGCGCGGCGAGGAGGCACTGCGCGCCGT CACGCTCGTGGAGGGCTGGACCTTCCGCCAGTTCCGCGCCGCGCTGGACCGCGACGAAGCGCTGCGCCACGACACCCAGG GCCTGGCCGACGCCGCCATCATGGAGCGCCTGGGCCGCCCCGGGGTGCCGCCGGAGGGGCGCTTCTTCCCTGACACCTAC ACCTTCGCCAAGGGTACGAGCGATCTCGCGGTGATGCGGCGGGCCCTGCGCGCCATGGATCGCAGGCTGGAAGCCGCATG GGCGCAGCGCTCCGCCGACCTGCCGCTCAAGAGCGCCGACGAGGCCCTCATCCTCGCGAGCATCGTCGAGAAGGAAACCG GCCGCGCCTCCGACCGCGGCCAGATCGCCGGCGTCTTCGTCAACCGGCTGAAGGCGGGCATGCTGCTGCAGACCGATCCC ACGGTCATCTACGGCATGGGCGAAAAGTTCGACGGCAACCTGCGCCGCCGCGACCTGCTGGCCGATACGCCCTGGAACAC CTACACACGTGCCGGCCTGCCGCCCACACCCATTTCGATGCCGGGCAAGGCTTCGCTCATCGCCGCCGTGCAGCCCGAGC GCACGCAGGCCCTCTATTTCGTGGCGCGGGGCGACGGCACCAGCCACTTCAGCCCCACGCTCGACGAACACAACCGCGCG GTGAACCGCTACCAGCGCGGCCAGCCGGCGCCGCAGGGGCAGTAA
Upstream 100 bases:
>100_bases AGGCCATTCAGGGGGGACGTCATGGGTGAATTATCATGCCCGGCTCTTTCCCCTCTCTGCATTCCGGTCCGTGCGCCGTT TCTTCCTTTTCATCGTACTG
Downstream 100 bases:
>100_bases ACCGCACCGGCAGCGCACGCACCACAAAGGTCTTTCTTCCATGCAGCGACGGGGTTGGTTCATCACATTCGAGGGCATCG ACGGGGCGGGAAAGTCCTCC
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MAFAAAGLGFWWLHHPLPQRAAAGAATAGGTPGVLELEIEPGTTPRGVAVAAVQAGVDTDPRLLYAWFRLSGKDRLIKAG NYEIPPGTTPFGLLQKLVRGEEALRAVTLVEGWTFRQFRAALDRDEALRHDTQGLADAAIMERLGRPGVPPEGRFFPDTY TFAKGTSDLAVMRRALRAMDRRLEAAWAQRSADLPLKSADEALILASIVEKETGRASDRGQIAGVFVNRLKAGMLLQTDP TVIYGMGEKFDGNLRRRDLLADTPWNTYTRAGLPPTPISMPGKASLIAAVQPERTQALYFVARGDGTSHFSPTLDEHNRA VNRYQRGQPAPQGQ
Sequences:
>Translated_334_residues MAFAAAGLGFWWLHHPLPQRAAAGAATAGGTPGVLELEIEPGTTPRGVAVAAVQAGVDTDPRLLYAWFRLSGKDRLIKAG NYEIPPGTTPFGLLQKLVRGEEALRAVTLVEGWTFRQFRAALDRDEALRHDTQGLADAAIMERLGRPGVPPEGRFFPDTY TFAKGTSDLAVMRRALRAMDRRLEAAWAQRSADLPLKSADEALILASIVEKETGRASDRGQIAGVFVNRLKAGMLLQTDP TVIYGMGEKFDGNLRRRDLLADTPWNTYTRAGLPPTPISMPGKASLIAAVQPERTQALYFVARGDGTSHFSPTLDEHNRA VNRYQRGQPAPQGQ >Mature_333_residues AFAAAGLGFWWLHHPLPQRAAAGAATAGGTPGVLELEIEPGTTPRGVAVAAVQAGVDTDPRLLYAWFRLSGKDRLIKAGN YEIPPGTTPFGLLQKLVRGEEALRAVTLVEGWTFRQFRAALDRDEALRHDTQGLADAAIMERLGRPGVPPEGRFFPDTYT FAKGTSDLAVMRRALRAMDRRLEAAWAQRSADLPLKSADEALILASIVEKETGRASDRGQIAGVFVNRLKAGMLLQTDPT VIYGMGEKFDGNLRRRDLLADTPWNTYTRAGLPPTPISMPGKASLIAAVQPERTQALYFVARGDGTSHFSPTLDEHNRAV NRYQRGQPAPQGQ
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=323, Percent_Identity=36.2229102167183, Blast_Score=197, Evalue=7e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 36335; Mature: 36204
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFAAAGLGFWWLHHPLPQRAAAGAATAGGTPGVLELEIEPGTTPRGVAVAAVQAGVDTD CCCCCCCCHHHHHHCCCCHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCC PRLLYAWFRLSGKDRLIKAGNYEIPPGTTPFGLLQKLVRGEEALRAVTLVEGWTFRQFRA HHEEEEEEEECCCCCEEECCCEECCCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHH ALDRDEALRHDTQGLADAAIMERLGRPGVPPEGRFFPDTYTFAKGTSDLAVMRRALRAMD HHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHH RRLEAAWAQRSADLPLKSADEALILASIVEKETGRASDRGQIAGVFVNRLKAGMLLQTDP HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEECCC TVIYGMGEKFDGNLRRRDLLADTPWNTYTRAGLPPTPISMPGKASLIAAVQPERTQALYF CEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEE VARGDGTSHFSPTLDEHNRAVNRYQRGQPAPQGQ EEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AFAAAGLGFWWLHHPLPQRAAAGAATAGGTPGVLELEIEPGTTPRGVAVAAVQAGVDTD CCCCCCCHHHHHHCCCCHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCC PRLLYAWFRLSGKDRLIKAGNYEIPPGTTPFGLLQKLVRGEEALRAVTLVEGWTFRQFRA HHEEEEEEEECCCCCEEECCCEECCCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHH ALDRDEALRHDTQGLADAAIMERLGRPGVPPEGRFFPDTYTFAKGTSDLAVMRRALRAMD HHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHH RRLEAAWAQRSADLPLKSADEALILASIVEKETGRASDRGQIAGVFVNRLKAGMLLQTDP HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEECCC TVIYGMGEKFDGNLRRRDLLADTPWNTYTRAGLPPTPISMPGKASLIAAVQPERTQALYF CEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEE VARGDGTSHFSPTLDEHNRAVNRYQRGQPAPQGQ EEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]