Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120612019

Identifier: 120612019

GI number: 120612019

Start: 3720530

End: 3721351

Strand: Reverse

Name: 120612019

Synonym: Aave_3365

Alternate gene names: NA

Gene position: 3721351-3720530 (Counterclockwise)

Preceding gene: 120612020

Following gene: 120612018

Centisome position: 69.52

GC content: 66.79

Gene sequence:

>822_bases
ATGGATGCTCAAAATTCAGGAAAGCTGAACCGTTTGCTGGCCGAGCTGGGCGATACTCACCTAGTGTCCAGCCGCTGGCT
CCGGGCGCACGGCTACTCCAATAGCCTTGTGGCGCGCTATGTGGGCAGCGGCTGGCTGGTGTCGCCGGCGCGTGGTGTCT
ACATGCGCAGAGGCGGGCGGCTGCAATGGGATGGTGTGGTCCGCAGCCTGCAGGTCGGCGAGGGCATGCCGCTGCACGTC
GGGGGACGCTTCGCGCTCGGCCTGCAGGGCCACGAGCACTACCTGCGCCTGGGCGATGCCGGGACGATCACGCTGTATGG
GCCACAGCAACTGCCGGGCTGGGTGGACAAGCTTTCGCTGGAGCAACGCTTCGAGTACCAGGGCAAGGGTCCGCTCGATC
TCCCGGCCGTGCCTGTCACTGCGGAAGTCTCCGAGAAGGCGTTGTCGGAAGCGGGCCTAGCTTGGCATTCAGCAGCACCT
GGGACCAATGCGCTGGTCTGCTCGACGCCCGAGCGGGCCATGCTGGAACTGTGCGACAGCGTGTCGGATGCGGCAGGGGT
CTACGAGGCCGATGCGCTGATGCAGGCCATGACCACGCTGCGGCCGCAGCGGGTCGGCCTGCTGTTGCGCCACTGTCGCA
GCATCAAGGCGAAGCGGCTGTTCCTGGCCCTGGCCGAGCGCCATCGGCATGCGTGGCTGTCGCACGTGCCCCTGGAGGGC
GTTGATCTCGGCCGTGGCAAACGCGCGCTGGTGCCCGGCGGGCGCCTGCATCCGACCTATCAGATCACCTTGCCGGGAGA
CCTCGATGAGCACTTGGCTTGA

Upstream 100 bases:

>100_bases
TTGCTGGCATGGCGAAAAGATCACTCTGAGTGATTCTTTGTGGCCCTTGTCAAACTGGCCTATCTTGGTGAAGGTTTATA
AATCTGTTATTTTGAGCACT

Downstream 100 bases:

>100_bases
CCATTGGGACGGGCGCTACACGGACAGGGTGCGGCTGCTGGTCGAGATCCTGCCGGTGCTGGCGCAGGAGCCGCGCTTCG
CGCTCAAGGGAGGTACGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MDAQNSGKLNRLLAELGDTHLVSSRWLRAHGYSNSLVARYVGSGWLVSPARGVYMRRGGRLQWDGVVRSLQVGEGMPLHV
GGRFALGLQGHEHYLRLGDAGTITLYGPQQLPGWVDKLSLEQRFEYQGKGPLDLPAVPVTAEVSEKALSEAGLAWHSAAP
GTNALVCSTPERAMLELCDSVSDAAGVYEADALMQAMTTLRPQRVGLLLRHCRSIKAKRLFLALAERHRHAWLSHVPLEG
VDLGRGKRALVPGGRLHPTYQITLPGDLDEHLA

Sequences:

>Translated_273_residues
MDAQNSGKLNRLLAELGDTHLVSSRWLRAHGYSNSLVARYVGSGWLVSPARGVYMRRGGRLQWDGVVRSLQVGEGMPLHV
GGRFALGLQGHEHYLRLGDAGTITLYGPQQLPGWVDKLSLEQRFEYQGKGPLDLPAVPVTAEVSEKALSEAGLAWHSAAP
GTNALVCSTPERAMLELCDSVSDAAGVYEADALMQAMTTLRPQRVGLLLRHCRSIKAKRLFLALAERHRHAWLSHVPLEG
VDLGRGKRALVPGGRLHPTYQITLPGDLDEHLA
>Mature_273_residues
MDAQNSGKLNRLLAELGDTHLVSSRWLRAHGYSNSLVARYVGSGWLVSPARGVYMRRGGRLQWDGVVRSLQVGEGMPLHV
GGRFALGLQGHEHYLRLGDAGTITLYGPQQLPGWVDKLSLEQRFEYQGKGPLDLPAVPVTAEVSEKALSEAGLAWHSAAP
GTNALVCSTPERAMLELCDSVSDAAGVYEADALMQAMTTLRPQRVGLLLRHCRSIKAKRLFLALAERHRHAWLSHVPLEG
VDLGRGKRALVPGGRLHPTYQITLPGDLDEHLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29783; Mature: 29783

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAQNSGKLNRLLAELGDTHLVSSRWLRAHGYSNSLVARYVGSGWLVSPARGVYMRRGGR
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHCCCCEEECCCCCEEECCCCE
LQWDGVVRSLQVGEGMPLHVGGRFALGLQGHEHYLRLGDAGTITLYGPQQLPGWVDKLSL
EEHHHHHHHHHCCCCCEEEECCEEEEECCCCCEEEEECCCCEEEEECCHHCCCHHHHHHH
EQRFEYQGKGPLDLPAVPVTAEVSEKALSEAGLAWHSAAPGTNALVCSTPERAMLELCDS
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCEEEECCCHHHHHHHHHH
VSDAAGVYEADALMQAMTTLRPQRVGLLLRHCRSIKAKRLFLALAERHRHAWLSHVPLEG
HHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VDLGRGKRALVPGGRLHPTYQITLPGDLDEHLA
CCCCCCCEEECCCCCCCCEEEEEECCCCHHHCC
>Mature Secondary Structure
MDAQNSGKLNRLLAELGDTHLVSSRWLRAHGYSNSLVARYVGSGWLVSPARGVYMRRGGR
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHCCCCEEECCCCCEEECCCCE
LQWDGVVRSLQVGEGMPLHVGGRFALGLQGHEHYLRLGDAGTITLYGPQQLPGWVDKLSL
EEHHHHHHHHHCCCCCEEEECCEEEEECCCCCEEEEECCCCEEEEECCHHCCCHHHHHHH
EQRFEYQGKGPLDLPAVPVTAEVSEKALSEAGLAWHSAAPGTNALVCSTPERAMLELCDS
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCEEEECCCHHHHHHHHHH
VSDAAGVYEADALMQAMTTLRPQRVGLLLRHCRSIKAKRLFLALAERHRHAWLSHVPLEG
HHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VDLGRGKRALVPGGRLHPTYQITLPGDLDEHLA
CCCCCCCEEECCCCCCCCEEEEEECCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA