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The map label for this gene is kipR [H]

Identifier: 120611986

GI number: 120611986

Start: 3683571

End: 3684425

Strand: Reverse

Name: kipR [H]

Synonym: Aave_3331

Alternate gene names: 120611986

Gene position: 3684425-3683571 (Counterclockwise)

Preceding gene: 120611993

Following gene: 120611982

Centisome position: 68.83

GC content: 70.88

Gene sequence:

>855_bases
ATGGAGCAGACAAGCGGACGCAAGGCACAGCGGGCGGGAGCCCGTGCAACGAAACGGGAGGCCGGCATCGCGGCGGAGGC
GGCGTCTGCCGCGGCCGACGCGGGGCGCTCCCCGGAATCGAGCCTGTCGCGCCTGCTCGCCACGCTGGGGCTGTTCTCCA
CGGCCAGGCCCTCCTTGATGGCCGACGAGATTGCCGCCGAGCTGGGCGTGCCCCAGAGCACGGCCTACCGGTACATCCAG
GAACTCACGAAGGTGGGTCTGCTGGTGCGGCTGGACCGCAGCATCACGCTGGGCCCCCGCATCATCGAACTGGACCGCTG
CATCCGGGAATCCGATCCGGTGATCCGCGCCGCGGTGCCGCCGATGCGCGAACTGGCGGAGCAGACGGGGCTGGACGTTT
TCCTGTCCAAGCTCTACGGCCATTCCATCATCACGGTGCACACGGAATCCCATGATCCCCAGCCGCGGCTGCGCTATGGG
CGGGGCCGCCCGGTCCCCGTGCTGCAGGGCGCCAGCTCCAAGGCCCTGGTGGCGTTCCTGCCGGCCGCGCGGCTGCGGCG
GCTGCACCAGGAACTGGCCGGCGAATCCGGCGACGTGCCCTCCTGGGAGGTTTTCTACGAGATGGCGCAGCGCATCCGCC
GCGACGGCTACTGCCGCACGTCGGGCGAGCTGAACGAGGGCCGGACAGGGGTGTCGGCGCCGATCTTCGGGCGCGGGCGG
CTGGTGGTGGCGAGCGTCACGGCGCTGGGCAGCGACGCGCGGATGGCGCTGTTCAAGGAAGAAGCCATCGCCGAACTGGT
GCAGCGCACGGCCCACATGGTCAGCGTGCGCCTGTCGGCCGACGGACACCTGTAG

Upstream 100 bases:

>100_bases
CGGACCCGGGGCCGTCCTGCGCGGGGGGCGGTGGCCGGAGCCGCCCGCCGGTTCGCTACCATCGGGCATGGTCATCGCAT
TCGAGGGAGGCACAGGTTTC

Downstream 100 bases:

>100_bases
GGGCGGGCCCTTCCGTCACAGGGCGATGTTCGCGCGCCGGACGATCGGGGCGGCGCGCGACAGCGAATGCCGCCAGATCT
CCACCGCCTGCTCCGGCGTG

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: Kip operon repressor protein [H]

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MEQTSGRKAQRAGARATKREAGIAAEAASAAADAGRSPESSLSRLLATLGLFSTARPSLMADEIAAELGVPQSTAYRYIQ
ELTKVGLLVRLDRSITLGPRIIELDRCIRESDPVIRAAVPPMRELAEQTGLDVFLSKLYGHSIITVHTESHDPQPRLRYG
RGRPVPVLQGASSKALVAFLPAARLRRLHQELAGESGDVPSWEVFYEMAQRIRRDGYCRTSGELNEGRTGVSAPIFGRGR
LVVASVTALGSDARMALFKEEAIAELVQRTAHMVSVRLSADGHL

Sequences:

>Translated_284_residues
MEQTSGRKAQRAGARATKREAGIAAEAASAAADAGRSPESSLSRLLATLGLFSTARPSLMADEIAAELGVPQSTAYRYIQ
ELTKVGLLVRLDRSITLGPRIIELDRCIRESDPVIRAAVPPMRELAEQTGLDVFLSKLYGHSIITVHTESHDPQPRLRYG
RGRPVPVLQGASSKALVAFLPAARLRRLHQELAGESGDVPSWEVFYEMAQRIRRDGYCRTSGELNEGRTGVSAPIFGRGR
LVVASVTALGSDARMALFKEEAIAELVQRTAHMVSVRLSADGHL
>Mature_284_residues
MEQTSGRKAQRAGARATKREAGIAAEAASAAADAGRSPESSLSRLLATLGLFSTARPSLMADEIAAELGVPQSTAYRYIQ
ELTKVGLLVRLDRSITLGPRIIELDRCIRESDPVIRAAVPPMRELAEQTGLDVFLSKLYGHSIITVHTESHDPQPRLRYG
RGRPVPVLQGASSKALVAFLPAARLRRLHQELAGESGDVPSWEVFYEMAQRIRRDGYCRTSGELNEGRTGVSAPIFGRGR
LVVASVTALGSDARMALFKEEAIAELVQRTAHMVSVRLSADGHL

Specific function: Transcriptional repressor of the kip gene-containing operon [H]

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014757
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]

EC number: NA

Molecular weight: Translated: 30764; Mature: 30764

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQTSGRKAQRAGARATKREAGIAAEAASAAADAGRSPESSLSRLLATLGLFSTARPSLM
CCCCCCCHHHHHCCHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHH
ADEIAAELGVPQSTAYRYIQELTKVGLLVRLDRSITLGPRIIELDRCIRESDPVIRAAVP
HHHHHHHHCCCHHHHHHHHHHHHHHCHHEEECCCEECCCHHHHHHHHHHCCCCEEECCCC
PMRELAEQTGLDVFLSKLYGHSIITVHTESHDPQPRLRYGRGRPVPVLQGASSKALVAFL
HHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHCCCCCCCCEECCCCCCHHHHHH
PAARLRRLHQELAGESGDVPSWEVFYEMAQRIRRDGYCRTSGELNEGRTGVSAPIFGRGR
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
LVVASVTALGSDARMALFKEEAIAELVQRTAHMVSVRLSADGHL
EEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCC
>Mature Secondary Structure
MEQTSGRKAQRAGARATKREAGIAAEAASAAADAGRSPESSLSRLLATLGLFSTARPSLM
CCCCCCCHHHHHCCHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHH
ADEIAAELGVPQSTAYRYIQELTKVGLLVRLDRSITLGPRIIELDRCIRESDPVIRAAVP
HHHHHHHHCCCHHHHHHHHHHHHHHCHHEEECCCEECCCHHHHHHHHHHCCCCEEECCCC
PMRELAEQTGLDVFLSKLYGHSIITVHTESHDPQPRLRYGRGRPVPVLQGASSKALVAFL
HHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHCCCCCCCCEECCCCCCHHHHHH
PAARLRRLHQELAGESGDVPSWEVFYEMAQRIRRDGYCRTSGELNEGRTGVSAPIFGRGR
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
LVVASVTALGSDARMALFKEEAIAELVQRTAHMVSVRLSADGHL
EEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]