Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120611978

Identifier: 120611978

GI number: 120611978

Start: 3673807

End: 3674529

Strand: Reverse

Name: 120611978

Synonym: Aave_3322

Alternate gene names: NA

Gene position: 3674529-3673807 (Counterclockwise)

Preceding gene: 120611979

Following gene: 120611976

Centisome position: 68.65

GC content: 74.55

Gene sequence:

>723_bases
ATGGAAGGTTTTCCGGAACCGGTGCTGGATGAGCATCGAGCGCTGTTGGCGGAGTACGGGCGGGCGCAGCAGCGCTGCAG
CCGGGACCTGGCGGAGCAGGCGCGGCGTATCGAGGCGCTGCAGGCCGAGGTGGTGAAGCTGCGGGCGCGCGCGCTCGTGG
CGGAAACCGCGCTGGCGTATGCACGGGAAGATCGGCGCAGCCAGGAAGAGGCACTGCCCGGCCTGCGCCGTCGGCGGGCC
CTGGCCCGGCAGGTGGAGGGGCTCACGCAGCGGCTGCAGAACCTGATGCGGGAAGTGCTGCATTGGCAGTGGCGCGCGGC
CGCGCGGGCCGGCGCGGCGCATGCCGCCGGAGCGGGGAAGGGGGCGGCCGGCCGGCCGGAGCCTGCCATGCCGGCTCCGC
ACGCCGTGGTGTGCATCGCGCGCGGACCGGGCGGGGCGCTGGTGGCACAGCCTTTCGGCCCGGGGGAATCTCCCCCTTCG
GGCGATGCCGGGCAGCCCGGCGCGGCTTCCAGCCTGCCCGGCGACGCGGCGGCCTTCGAGGCCAGCCTGCGGGCCGCGGA
TTTCGTGATCTGTCAGACCGGCTGCGTGGGCCACGACGACTATTGGCGCGTGCAGGACCACTGCCGCCGCACCGGAAAGC
CCTGCGTGCTGGTGGACCAGCCGCAGGTGGTGCATGTCGTGCGGGGACTGTCGCGGCCGGCTCCGGCCGTGGCCGAAGGC
TGA

Upstream 100 bases:

>100_bases
TTGACGGCAGTGTAGCATTAAATGAGAATGCTTATCAATACATTCTTTAGCCGGATGGTCATTGCATGATCTCCGGCCAT
GCCTTCTGGAGGAGCGTTGC

Downstream 100 bases:

>100_bases
GACCGCCCGGGGCCGGCTGCCGGCTCACTCCATGGTCATGAGGCTGGCATTGCCGCCGGCCGCCGCGGTGTTGATGCTGA
CCGCGCGCTCCAGGACCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MEGFPEPVLDEHRALLAEYGRAQQRCSRDLAEQARRIEALQAEVVKLRARALVAETALAYAREDRRSQEEALPGLRRRRA
LARQVEGLTQRLQNLMREVLHWQWRAAARAGAAHAAGAGKGAAGRPEPAMPAPHAVVCIARGPGGALVAQPFGPGESPPS
GDAGQPGAASSLPGDAAAFEASLRAADFVICQTGCVGHDDYWRVQDHCRRTGKPCVLVDQPQVVHVVRGLSRPAPAVAEG

Sequences:

>Translated_240_residues
MEGFPEPVLDEHRALLAEYGRAQQRCSRDLAEQARRIEALQAEVVKLRARALVAETALAYAREDRRSQEEALPGLRRRRA
LARQVEGLTQRLQNLMREVLHWQWRAAARAGAAHAAGAGKGAAGRPEPAMPAPHAVVCIARGPGGALVAQPFGPGESPPS
GDAGQPGAASSLPGDAAAFEASLRAADFVICQTGCVGHDDYWRVQDHCRRTGKPCVLVDQPQVVHVVRGLSRPAPAVAEG
>Mature_240_residues
MEGFPEPVLDEHRALLAEYGRAQQRCSRDLAEQARRIEALQAEVVKLRARALVAETALAYAREDRRSQEEALPGLRRRRA
LARQVEGLTQRLQNLMREVLHWQWRAAARAGAAHAAGAGKGAAGRPEPAMPAPHAVVCIARGPGGALVAQPFGPGESPPS
GDAGQPGAASSLPGDAAAFEASLRAADFVICQTGCVGHDDYWRVQDHCRRTGKPCVLVDQPQVVHVVRGLSRPAPAVAEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25613; Mature: 25613

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGFPEPVLDEHRALLAEYGRAQQRCSRDLAEQARRIEALQAEVVKLRARALVAETALAY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AREDRRSQEEALPGLRRRRALARQVEGLTQRLQNLMREVLHWQWRAAARAGAAHAAGAGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
GAAGRPEPAMPAPHAVVCIARGPGGALVAQPFGPGESPPSGDAGQPGAASSLPGDAAAFE
CCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
ASLRAADFVICQTGCVGHDDYWRVQDHCRRTGKPCVLVDQPQVVHVVRGLSRPAPAVAEG
HHHHHHHEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MEGFPEPVLDEHRALLAEYGRAQQRCSRDLAEQARRIEALQAEVVKLRARALVAETALAY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AREDRRSQEEALPGLRRRRALARQVEGLTQRLQNLMREVLHWQWRAAARAGAAHAAGAGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
GAAGRPEPAMPAPHAVVCIARGPGGALVAQPFGPGESPPSGDAGQPGAASSLPGDAAAFE
CCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
ASLRAADFVICQTGCVGHDDYWRVQDHCRRTGKPCVLVDQPQVVHVVRGLSRPAPAVAEG
HHHHHHHEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA