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The map label for this gene is tonB2 [H]

Identifier: 120611967

GI number: 120611967

Start: 3663112

End: 3663810

Strand: Direct

Name: tonB2 [H]

Synonym: Aave_3311

Alternate gene names: 120611967

Gene position: 3663112-3663810 (Clockwise)

Preceding gene: 120611966

Following gene: 120611968

Centisome position: 68.43

GC content: 71.24

Gene sequence:

>699_bases
ATGTCCCAGTTTGATCGCTATGGCTCCCCCGGGGGCGTGAGCCGCAATGCGGTGATCGCAGGTTCGGTCGTATTGCTGCA
CGTCGCGGGCCTCTGGGCCCTGCAATCCGGCCTGGTGCGCCAGGCCGCCGAGATCATCGTTCCCGCGGAAGTGCTCAGCG
AGTTCATCACTCCGCCGGCACCTCCGCCACCGCCCGCGCCACCGCCCCCGAAGCCGGCGCCGCCGCCTCCCAAGCCCGCG
CCCCGCACGCCGGCTCCCCGCCCCGCGCCCATGCCCGTGGCCATCCCGGATCCCGCGCCCGCGCCGAACGCGCCGGTCGG
CATCACCGAGCCGCAGCCTCCCGCACCTCCGATCGCTGCCCCGCAGGCACCGCCCGCGCCACCGCCGGCACCGCCCGCGC
CGCCGGCGCCTCCCAAGATCGAGTTGCCGTCCAGCGACGCGGCCTATCTGAACAACCCCAAGCCCACCTATCCGGCGATC
AGCCGCCGGCTCGGCGAGCAGGGCAAGGTCGTGCTGCGGGTGCTGATCGGCACGGACGGCCTGCCTCAGAAAGTGGAAGT
CAACAAGTCCAGCGGCTTCGACCGGCTGGACCGCCAGGCGGTCGATGCCGTGATGCGCTGGAAATTCGTGCCCGGCAAGC
GCAACGGCGTGCCGGAAGCCATGTGGAACCTCGTTCCGGTCAATTTCGTCCTCGATTAA

Upstream 100 bases:

>100_bases
ATCTTCCATAAGTAAGCAATTCCTCTTTCCTCCTGCACTGCCCGGCGATGCCCAACCGCGCCGGGCCTCCTTCCACTGCG
CAGGCAGACACCCCTTTCCT

Downstream 100 bases:

>100_bases
ACGTCTCGCAACCTTTTTCAGCTTCAGGAGTTCTCATGGAATCGCATTTCGGCATTGCCAACGTATGGATCCAGGGTGAT
TTCGTCACCCGGGCCGTCGC

Product: TonB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MSQFDRYGSPGGVSRNAVIAGSVVLLHVAGLWALQSGLVRQAAEIIVPAEVLSEFITPPAPPPPPAPPPPKPAPPPPKPA
PRTPAPRPAPMPVAIPDPAPAPNAPVGITEPQPPAPPIAAPQAPPAPPPAPPAPPAPPKIELPSSDAAYLNNPKPTYPAI
SRRLGEQGKVVLRVLIGTDGLPQKVEVNKSSGFDRLDRQAVDAVMRWKFVPGKRNGVPEAMWNLVPVNFVLD

Sequences:

>Translated_232_residues
MSQFDRYGSPGGVSRNAVIAGSVVLLHVAGLWALQSGLVRQAAEIIVPAEVLSEFITPPAPPPPPAPPPPKPAPPPPKPA
PRTPAPRPAPMPVAIPDPAPAPNAPVGITEPQPPAPPIAAPQAPPAPPPAPPAPPAPPKIELPSSDAAYLNNPKPTYPAI
SRRLGEQGKVVLRVLIGTDGLPQKVEVNKSSGFDRLDRQAVDAVMRWKFVPGKRNGVPEAMWNLVPVNFVLD
>Mature_231_residues
SQFDRYGSPGGVSRNAVIAGSVVLLHVAGLWALQSGLVRQAAEIIVPAEVLSEFITPPAPPPPPAPPPPKPAPPPPKPAP
RTPAPRPAPMPVAIPDPAPAPNAPVGITEPQPPAPPIAAPQAPPAPPPAPPAPPAPPKIELPSSDAAYLNNPKPTYPAIS
RRLGEQGKVVLRVLIGTDGLPQKVEVNKSSGFDRLDRQAVDAVMRWKFVPGKRNGVPEAMWNLVPVNFVLD

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 24200; Mature: 24069

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQFDRYGSPGGVSRNAVIAGSVVLLHVAGLWALQSGLVRQAAEIIVPAEVLSEFITPPA
CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
PPPPPAPPPPKPAPPPPKPAPRTPAPRPAPMPVAIPDPAPAPNAPVGITEPQPPAPPIAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCC
PQAPPAPPPAPPAPPAPPKIELPSSDAAYLNNPKPTYPAISRRLGEQGKVVLRVLIGTDG
CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCC
LPQKVEVNKSSGFDRLDRQAVDAVMRWKFVPGKRNGVPEAMWNLVPVNFVLD
CCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCEEEEEC
>Mature Secondary Structure 
SQFDRYGSPGGVSRNAVIAGSVVLLHVAGLWALQSGLVRQAAEIIVPAEVLSEFITPPA
CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
PPPPPAPPPPKPAPPPPKPAPRTPAPRPAPMPVAIPDPAPAPNAPVGITEPQPPAPPIAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCC
PQAPPAPPPAPPAPPAPPKIELPSSDAAYLNNPKPTYPAISRRLGEQGKVVLRVLIGTDG
CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCC
LPQKVEVNKSSGFDRLDRQAVDAVMRWKFVPGKRNGVPEAMWNLVPVNFVLD
CCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10689178; 10984043 [H]