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The map label for this gene is gph [C]

Identifier: 120611933

GI number: 120611933

Start: 3621976

End: 3622659

Strand: Reverse

Name: gph [C]

Synonym: Aave_3277

Alternate gene names: 120611933

Gene position: 3622659-3621976 (Counterclockwise)

Preceding gene: 120611934

Following gene: 120611932

Centisome position: 67.68

GC content: 70.32

Gene sequence:

>684_bases
ATGGCGGACATGCCTCCCTTTCCCTCGCGTGTGAGCGCGGTGCTGTTCGACCTCGACGGCACGCTGGTGGACAGCGCGCC
GGATCTCGCCGCGGCTGCCGACAAGATCCGGACGGACCGTGGCCTGCCGTCCCTGCCCCTGGCAGAGTACCGGCCCATGG
CGGGCGCGGGTGCGCGCGGCATGCTCGCCGTGGCGCTCGGCATGGCACCCGACCACCCCGATTTCCCGGCGCTGCGGGAA
GAGTTCTTCGCCAACTACGAGGCCTGCATCCATGACCGCACGACCGTGTTCGACGGCGTGGAGGCACTCGTGGAGCGGCT
GGCCCGGGCGCGCGTGCCGTGGGGCGTGGTCACCAACAAGGCTGCGCGCTTTTCCGTGCCTTTGACGGAGGCGATCCCCA
TGTTCCGCACGTCCGGCGCGCTGGTCAGCGGGGACACCACGCCCCATGCCAAGCCCCATCCCGCGCCGCTGCTGGAAGCC
GCCGCCCGGCTGGGCGTCGCGCCCGGAGAGTGCATCTACGTCGGCGACGACGAGCGCGACATCGTCGCGGGGAACGCTGC
CGGCATGGGCACGGTCGCCGCGCTGTACGGCTACCTCGGCAACCACAAGGAGCCGGCGCTCTGGGGAGCGCACTGCTCGA
TTAAATTTCCCCTCGACCTCTTGCAATGGCTTCCGGGAGCCTAA

Upstream 100 bases:

>100_bases
AGACCCGCGGCATGGAATACAACCCCCTCACGCGCCGTTATGCATTGAGCGGGGATACCAGTGTGAATTACCTCATGGCC
TGCCGCCGGGCGGAGGCGTG

Downstream 100 bases:

>100_bases
AATGGAGGGTCTGGGGCTGCCCTGGTTTCGACGTGGGTTCGGAATCGGTGTGGTGCATGTCGAGCTTGAGTGGCGCTCGT
AAATCTGCATTCGACAAACT

Product: phosphoglycolate phosphatase

Products: NA

Alternate protein names: PGP; PGPase [H]

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MADMPPFPSRVSAVLFDLDGTLVDSAPDLAAAADKIRTDRGLPSLPLAEYRPMAGAGARGMLAVALGMAPDHPDFPALRE
EFFANYEACIHDRTTVFDGVEALVERLARARVPWGVVTNKAARFSVPLTEAIPMFRTSGALVSGDTTPHAKPHPAPLLEA
AARLGVAPGECIYVGDDERDIVAGNAAGMGTVAALYGYLGNHKEPALWGAHCSIKFPLDLLQWLPGA

Sequences:

>Translated_227_residues
MADMPPFPSRVSAVLFDLDGTLVDSAPDLAAAADKIRTDRGLPSLPLAEYRPMAGAGARGMLAVALGMAPDHPDFPALRE
EFFANYEACIHDRTTVFDGVEALVERLARARVPWGVVTNKAARFSVPLTEAIPMFRTSGALVSGDTTPHAKPHPAPLLEA
AARLGVAPGECIYVGDDERDIVAGNAAGMGTVAALYGYLGNHKEPALWGAHCSIKFPLDLLQWLPGA
>Mature_226_residues
ADMPPFPSRVSAVLFDLDGTLVDSAPDLAAAADKIRTDRGLPSLPLAEYRPMAGAGARGMLAVALGMAPDHPDFPALREE
FFANYEACIHDRTTVFDGVEALVERLARARVPWGVVTNKAARFSVPLTEAIPMFRTSGALVSGDTTPHAKPHPAPLLEAA
ARLGVAPGECIYVGDDERDIVAGNAAGMGTVAALYGYLGNHKEPALWGAHCSIKFPLDLLQWLPGA

Specific function: Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stres

COG id: COG0546

COG function: function code R; Predicted phosphatases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1789787, Length=208, Percent_Identity=36.5384615384615, Blast_Score=104, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833
- InterPro:   IPR006346
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =3.1.3.18 [H]

Molecular weight: Translated: 24012; Mature: 23880

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADMPPFPSRVSAVLFDLDGTLVDSAPDLAAAADKIRTDRGLPSLPLAEYRPMAGAGARG
CCCCCCCHHHHHEEEECCCCCEECCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCH
MLAVALGMAPDHPDFPALREEFFANYEACIHDRTTVFDGVEALVERLARARVPWGVVTNK
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHCCC
AARFSVPLTEAIPMFRTSGALVSGDTTPHAKPHPAPLLEAAARLGVAPGECIYVGDDERD
CCEECCCHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCE
IVAGNAAGMGTVAALYGYLGNHKEPALWGAHCSIKFPLDLLQWLPGA
EEECCCCCHHHHHHHHHHHCCCCCCCEECCCEEEECCHHHHHHCCCC
>Mature Secondary Structure 
ADMPPFPSRVSAVLFDLDGTLVDSAPDLAAAADKIRTDRGLPSLPLAEYRPMAGAGARG
CCCCCCHHHHHEEEECCCCCEECCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCH
MLAVALGMAPDHPDFPALREEFFANYEACIHDRTTVFDGVEALVERLARARVPWGVVTNK
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHCCC
AARFSVPLTEAIPMFRTSGALVSGDTTPHAKPHPAPLLEAAARLGVAPGECIYVGDDERD
CCEECCCHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCE
IVAGNAAGMGTVAALYGYLGNHKEPALWGAHCSIKFPLDLLQWLPGA
EEECCCCCHHHHHHHHHHHCCCCCCCEECCCEEEECCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA