Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611932
Identifier: 120611932
GI number: 120611932
Start: 3620876
End: 3621454
Strand: Reverse
Name: 120611932
Synonym: Aave_3276
Alternate gene names: NA
Gene position: 3621454-3620876 (Counterclockwise)
Preceding gene: 120611933
Following gene: 120611929
Centisome position: 67.66
GC content: 65.63
Gene sequence:
>579_bases ATGGATTCTCTGGACAAGATACTGTGCCGCCTGTTCGGTTATCGCTGTCCGCTGACGGTCGAGCTCGATGGGGACAGCCT GCTGCACGGCTATGGCGTCCCGATCACACCGGTGCAGCGCATCCAGGCCGCCCGGCCGCGGTGGAAACTGGATGACCGCA CGGCCAATGGGCTGCGCATGGAGACCGCCATCCAGACGTTTCCCTCCGAGCCGCACACGGCCAGGATCATCGTGATCGCC CTGGGAGCCAACGACGCTTTCGGCATGGTGCCTGCCGATACTTATCGCGCGGATCTCGACAAGGCCGTGAGCGTGGTGCG CGCGGCCGGGGCCAGGCCGGTCTTCACGGGATTGGCGCGCATGCCCGCCGACCGTTTTCCGGCGGAATGGATCGCCAACT GGGAAGCGCTCAACGCCGTGATGCACGATATCGCGCAGCGCGAGGGCATCGAGCATGCGGGCTGGGATGCCGACTACCGG GGAGAGCAGGATCTCCAGCCCGATTTTGTCCATCGCTCGCAGGAGGCCAGCGACCGTTTCGCCGAGTTGCTGATCGCAGC CATCGAGCGCGCAGCCTAG
Upstream 100 bases:
>100_bases AGCGTGTGGCGGTTTTTTTTACGCTTCCGCAAAGCCGGGGTATGCTGAAAGTATTTTCTGGCTTTGGCTTGGCAACTCTC CATTCCCTTCGAGGAACTGC
Downstream 100 bases:
>100_bases TCACTTCGCTTCTTCGCGCGCTTCGATGGGCAGGTGGATGCAGGCGGTCAGGCCTCCGCCGGGTGTCGGTTGCATCTGCA CGCGGCCTTTCATCAGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MDSLDKILCRLFGYRCPLTVELDGDSLLHGYGVPITPVQRIQAARPRWKLDDRTANGLRMETAIQTFPSEPHTARIIVIA LGANDAFGMVPADTYRADLDKAVSVVRAAGARPVFTGLARMPADRFPAEWIANWEALNAVMHDIAQREGIEHAGWDADYR GEQDLQPDFVHRSQEASDRFAELLIAAIERAA
Sequences:
>Translated_192_residues MDSLDKILCRLFGYRCPLTVELDGDSLLHGYGVPITPVQRIQAARPRWKLDDRTANGLRMETAIQTFPSEPHTARIIVIA LGANDAFGMVPADTYRADLDKAVSVVRAAGARPVFTGLARMPADRFPAEWIANWEALNAVMHDIAQREGIEHAGWDADYR GEQDLQPDFVHRSQEASDRFAELLIAAIERAA >Mature_192_residues MDSLDKILCRLFGYRCPLTVELDGDSLLHGYGVPITPVQRIQAARPRWKLDDRTANGLRMETAIQTFPSEPHTARIIVIA LGANDAFGMVPADTYRADLDKAVSVVRAAGARPVFTGLARMPADRFPAEWIANWEALNAVMHDIAQREGIEHAGWDADYR GEQDLQPDFVHRSQEASDRFAELLIAAIERAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21324; Mature: 21324
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSLDKILCRLFGYRCPLTVELDGDSLLHGYGVPITPVQRIQAARPRWKLDDRTANGLRM CCHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCEEH ETAIQTFPSEPHTARIIVIALGANDAFGMVPADTYRADLDKAVSVVRAAGARPVFTGLAR HHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH MPADRFPAEWIANWEALNAVMHDIAQREGIEHAGWDADYRGEQDLQPDFVHRSQEASDRF CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHH AELLIAAIERAA HHHHHHHHHHCC >Mature Secondary Structure MDSLDKILCRLFGYRCPLTVELDGDSLLHGYGVPITPVQRIQAARPRWKLDDRTANGLRM CCHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCEEH ETAIQTFPSEPHTARIIVIALGANDAFGMVPADTYRADLDKAVSVVRAAGARPVFTGLAR HHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH MPADRFPAEWIANWEALNAVMHDIAQREGIEHAGWDADYRGEQDLQPDFVHRSQEASDRF CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHH AELLIAAIERAA HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA