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The map label for this gene is 120611914

Identifier: 120611914

GI number: 120611914

Start: 3599715

End: 3600275

Strand: Reverse

Name: 120611914

Synonym: Aave_3256

Alternate gene names: NA

Gene position: 3600275-3599715 (Counterclockwise)

Preceding gene: 120611915

Following gene: 120611912

Centisome position: 67.26

GC content: 65.95

Gene sequence:

>561_bases
ATGACCTTTCGCCTGAATGCCCGCCTCGCAGCCGCCAGCCTCACGCTCGTCCTGTCTGCCGCCGTCATGCCCGCCCTCGC
GCAGGTGACCGTCGGCGGCGCGCCGATGTTCCCCACCAAGGACATCATCGACAACGCGGTGAATTCGAAGGATCACACCA
CGCTGGTCGCTGCCGTGAAGGCCGCGGGACTGGTGGACACGCTCAAGGGCCCCGGTCCGTTCACGGTGTTCGCACCCACC
AATGCAGCCTTCGCCGCGCTGCCGGCCGGCACGGTCGATACGCTGCTGAAGCCGGAGAACAAGGCCACGCTGACCAAGGT
GCTGACCTACCACGTCGTGCCTGGCAAGATCGATGCGGCCGCGCTGTCGAAGATGATCGCCGATGGCAAGGGCTCGGCCA
GCCTGAAGACCGTGGCCGGTGGCACGCTGACCGCCAGGGCCAGCGGTTCGTCCATCGCGCTGACGGATGAAAAGGGCGGC
ACGTCCACCGTCACCATCCCTGACGTGTACCAGTCCAACGGGGTGATCCACGTCGTGGACAAGGTGCTGTTGCCGAAGTA
A

Upstream 100 bases:

>100_bases
AATGGGTACCGGGCTTGATCCAGGCGGTGCCATGGCCCGTATGAGTGGGCAGCCGCGCGAGTTATCCGGGCGGCCATCCC
AACGACCGACGGAGACTTCC

Downstream 100 bases:

>100_bases
TCCCTGTCCGTCCGTAAGTACGCATCGCTGGTGCCCGGTGGCTGCCCGCCGGTGCGCGGATTGCCGCTGGCCGGATGTGC
GAAAGCCGCGAGGCCGCCCC

Product: beta-Ig-H3/fasciclin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MTFRLNARLAAASLTLVLSAAVMPALAQVTVGGAPMFPTKDIIDNAVNSKDHTTLVAAVKAAGLVDTLKGPGPFTVFAPT
NAAFAALPAGTVDTLLKPENKATLTKVLTYHVVPGKIDAAALSKMIADGKGSASLKTVAGGTLTARASGSSIALTDEKGG
TSTVTIPDVYQSNGVIHVVDKVLLPK

Sequences:

>Translated_186_residues
MTFRLNARLAAASLTLVLSAAVMPALAQVTVGGAPMFPTKDIIDNAVNSKDHTTLVAAVKAAGLVDTLKGPGPFTVFAPT
NAAFAALPAGTVDTLLKPENKATLTKVLTYHVVPGKIDAAALSKMIADGKGSASLKTVAGGTLTARASGSSIALTDEKGG
TSTVTIPDVYQSNGVIHVVDKVLLPK
>Mature_185_residues
TFRLNARLAAASLTLVLSAAVMPALAQVTVGGAPMFPTKDIIDNAVNSKDHTTLVAAVKAAGLVDTLKGPGPFTVFAPTN
AAFAALPAGTVDTLLKPENKATLTKVLTYHVVPGKIDAAALSKMIADGKGSASLKTVAGGTLTARASGSSIALTDEKGGT
STVTIPDVYQSNGVIHVVDKVLLPK

Specific function: Unknown

COG id: COG2335

COG function: function code M; Secreted and surface protein containing fasciclin-like repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAS1 domain [H]

Homologues:

Organism=Homo sapiens, GI4507467, Length=133, Percent_Identity=33.8345864661654, Blast_Score=70, Evalue=9e-13,
Organism=Homo sapiens, GI209862911, Length=135, Percent_Identity=31.1111111111111, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI209863011, Length=135, Percent_Identity=31.1111111111111, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI209862907, Length=135, Percent_Identity=31.1111111111111, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI209863034, Length=135, Percent_Identity=31.1111111111111, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000782 [H]

Pfam domain/function: PF02469 Fasciclin [H]

EC number: NA

Molecular weight: Translated: 18805; Mature: 18674

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS50213 FAS1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFRLNARLAAASLTLVLSAAVMPALAQVTVGGAPMFPTKDIIDNAVNSKDHTTLVAAVK
CEEEECCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHCCCCCCHHHHHHHH
AAGLVDTLKGPGPFTVFAPTNAAFAALPAGTVDTLLKPENKATLTKVLTYHVVPGKIDAA
HHCHHHHCCCCCCEEEECCCCCCEEECCCCCHHHHCCCCCHHHHHHEEEEEECCCCCCHH
ALSKMIADGKGSASLKTVAGGTLTARASGSSIALTDEKGGTSTVTIPDVYQSNGVIHVVD
HHHHHHHCCCCCCEEEEECCCEEEEECCCCEEEEECCCCCCEEEEECCHHCCCCEEEEEC
KVLLPK
HHHCCC
>Mature Secondary Structure 
TFRLNARLAAASLTLVLSAAVMPALAQVTVGGAPMFPTKDIIDNAVNSKDHTTLVAAVK
EEEECCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHCCCCCCHHHHHHHH
AAGLVDTLKGPGPFTVFAPTNAAFAALPAGTVDTLLKPENKATLTKVLTYHVVPGKIDAA
HHCHHHHCCCCCCEEEECCCCCCEEECCCCCHHHHCCCCCHHHHHHEEEEEECCCCCCHH
ALSKMIADGKGSASLKTVAGGTLTARASGSSIALTDEKGGTSTVTIPDVYQSNGVIHVVD
HHHHHHHCCCCCCEEEEECCCEEEEECCCCEEEEECCCCCCEEEEECCHHCCCCEEEEEC
KVLLPK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]