| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611334
Identifier: 120611334
GI number: 120611334
Start: 2926292
End: 2926828
Strand: Direct
Name: 120611334
Synonym: Aave_2666
Alternate gene names: NA
Gene position: 2926292-2926828 (Clockwise)
Preceding gene: 120611331
Following gene: 120611337
Centisome position: 54.67
GC content: 71.14
Gene sequence:
>537_bases ATGAAAACCCTGATCGACCATCTGTCGCAGTACGCGGACTACCACCGCGATCCGCGCAATATCCAGACCCATTTCGTCGG TGTGCCCATGATCATGCTGGCCGTCACGGTGCTGCTGTCGCGTCCGGCGTGGCAGGCCGCCGGCCTGCTGCCGGTGTCGC CCGCCCTCGTTGCGGCGCTGGCCGCCAGCCTGTTCTATTTCCGGCTCGATGCGCGCTACGGGCTCGCGATGGCCACGGTG CTGGCCGCCATGCTGGCCGTGGGCCAGTGGCTGGCGGGGCAGGGTACCGCGCTGTGGCTGGGTGCGGGCCTGGGCCTGTT CGTGGTCGGCTGGGTGATCCAGTTCGTGGGCCACTATTACGAGGGCCGCAAGCCCGCCTTCGTGGACGACCTCGTGGGCC TGATCGTCGGGCCGCTTTTCGTGGCGGCCGAGATCGGCTTCGCGCTCGGGCTGCGTCGCGAGGTGCAGGCGGCGGTCGAG GCGCGCTCGGGCCCGGTGCGCCTGAACGAGCGGCCGGGCCGGCCGGCGCGGGCCTGA
Upstream 100 bases:
>100_bases GGTGGGTTGTGTCGGCTGGCCGACAGACGGTGCGGCGGCCACCGCGGATTATTCGCTCCAGGCACCCCGACCGAGAGGGC CGCCACGCAGGAGACGCTCC
Downstream 100 bases:
>100_bases CCCGGGTCCTTTCCCTCAGCGGCGCGGGCGGCGTGCCAGGACCGGCTCGCTCACGCCCTGCACGCCCACCAGTGTCAGTA CCGTGGCGAGCCCGGTCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MKTLIDHLSQYADYHRDPRNIQTHFVGVPMIMLAVTVLLSRPAWQAAGLLPVSPALVAALAASLFYFRLDARYGLAMATV LAAMLAVGQWLAGQGTALWLGAGLGLFVVGWVIQFVGHYYEGRKPAFVDDLVGLIVGPLFVAAEIGFALGLRREVQAAVE ARSGPVRLNERPGRPARA
Sequences:
>Translated_178_residues MKTLIDHLSQYADYHRDPRNIQTHFVGVPMIMLAVTVLLSRPAWQAAGLLPVSPALVAALAASLFYFRLDARYGLAMATV LAAMLAVGQWLAGQGTALWLGAGLGLFVVGWVIQFVGHYYEGRKPAFVDDLVGLIVGPLFVAAEIGFALGLRREVQAAVE ARSGPVRLNERPGRPARA >Mature_178_residues MKTLIDHLSQYADYHRDPRNIQTHFVGVPMIMLAVTVLLSRPAWQAAGLLPVSPALVAALAASLFYFRLDARYGLAMATV LAAMLAVGQWLAGQGTALWLGAGLGLFVVGWVIQFVGHYYEGRKPAFVDDLVGLIVGPLFVAAEIGFALGLRREVQAAVE ARSGPVRLNERPGRPARA
Specific function: Unknown
COG id: COG4539
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6321428, Length=180, Percent_Identity=31.1111111111111, Blast_Score=75, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19193; Mature: 19193
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLIDHLSQYADYHRDPRNIQTHFVGVPMIMLAVTVLLSRPAWQAAGLLPVSPALVAAL CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHH AASLFYFRLDARYGLAMATVLAAMLAVGQWLAGQGTALWLGAGLGLFVVGWVIQFVGHYY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHH EGRKPAFVDDLVGLIVGPLFVAAEIGFALGLRREVQAAVEARSGPVRLNERPGRPARA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCC >Mature Secondary Structure MKTLIDHLSQYADYHRDPRNIQTHFVGVPMIMLAVTVLLSRPAWQAAGLLPVSPALVAAL CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHH AASLFYFRLDARYGLAMATVLAAMLAVGQWLAGQGTALWLGAGLGLFVVGWVIQFVGHYY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHH EGRKPAFVDDLVGLIVGPLFVAAEIGFALGLRREVQAAVEARSGPVRLNERPGRPARA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA