| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120611289
Identifier: 120611289
GI number: 120611289
Start: 2873893
End: 2874690
Strand: Direct
Name: 120611289
Synonym: Aave_2621
Alternate gene names: NA
Gene position: 2873893-2874690 (Clockwise)
Preceding gene: 120611287
Following gene: 120611290
Centisome position: 53.69
GC content: 69.17
Gene sequence:
>798_bases ATGTCTTTCCGGAGGTCGCTTCATCGACCGGGTCCTGGGGAGGTTCCAGCGCCGCGGCCAGGCAAAAGCGCAGTGGCACC CATCGAGGCCTCCTGGGCCCGCGACGCGGCCGAAGTCCGGGAAGCCCAGCGGCTGAGGTACCTCGTGTTCGCGGGTGAAA TGGGCGCGCGCCTGAGCACCTCCGTCCCTGGCCATGACGTGGACGCCTTCGACGCGTACTGCGAGCACCTGCTCGTGCGG GACGTGGAAACGCGGGCCGTGATCGGCACCTACCGGGTGCTGACGCCCGCCCAGGCGCAGCGCGCGGGCGGGCTGTACAG CGACACCGAGTTCGACCTGTCGCGCCTGGACCACCTGCGCGGGCGCATGGTGGAGCTGGGCCGCAGCTGCGTGCACCCCG ACTACCGCCACGGCGGGGTCATCATGACCCTCTGGGGTGCGCTGGCGGACTTCATGGTGCGCAACCGGCTGGACATGATG ATCGGCTGCGCGAGCATCCCCATGCTGCACAACGGCGTGCTCAGCGGCAACGCCGCAGCCAGCATCTGGAACCAGCTCAA GGCAGGCTACATGGCGCCGGCCGAATACGAGGTGCAGCCCCGCCTGCCGCTGCCGGTGGACCAGCTCGACGGCTCGCTGC CGGTGGAGCCGCCGGCGCTGATCAAGGGTTACCTGCGGCTGGGCACGCGGGTGCTCGGAGCACCGGCGTGGGATCCGGAT TTCAACACCGCCGACCTGCCGATGCTGATGCGCATCGAGGATCTTCCTCCCCGCTACCGCAAGCATTTCCTCGGATGA
Upstream 100 bases:
>100_bases CCAGCGCGGCCCTGCAGGGCAGGGCTGCGATGGTTCAACGGTCCACCGGGAGTAATTCGTGAGCGACCTTCCTGTTCCCA CCCTGCCGCTGTCTCCTGAC
Downstream 100 bases:
>100_bases CCGCTTTGCGGCACGATGATCGTTGCGAGGCGGTTCGTGACATATGTCGATGACATGTCATGAAAATGTCATGGTCGAGC CCAATACTAAAACTGATTCC
Product: ornithine-acyl[acyl carrier protein] N-acyltransferase
Products: NA
Alternate protein names: Hemolysin; Hemolysin-Like Protein; Ornithine-Acyl(Acyl Carrier Protein) N-Acyltransferase; Phospholipid/Glycerol Acyltransferase; Ornithine-Acyl(Acyl Carrier Protein) N- Acyltransferase; Ornithine-Acyl N-Acyltransferase; Acyl-CoA N-Acyltransferases Superfamily Protein; Nudix Hydrolase; Phosphohistidine Phosphatase SixA; Acyltransferase Domain Protein; Hemolysin Protein
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MSFRRSLHRPGPGEVPAPRPGKSAVAPIEASWARDAAEVREAQRLRYLVFAGEMGARLSTSVPGHDVDAFDAYCEHLLVR DVETRAVIGTYRVLTPAQAQRAGGLYSDTEFDLSRLDHLRGRMVELGRSCVHPDYRHGGVIMTLWGALADFMVRNRLDMM IGCASIPMLHNGVLSGNAAASIWNQLKAGYMAPAEYEVQPRLPLPVDQLDGSLPVEPPALIKGYLRLGTRVLGAPAWDPD FNTADLPMLMRIEDLPPRYRKHFLG
Sequences:
>Translated_265_residues MSFRRSLHRPGPGEVPAPRPGKSAVAPIEASWARDAAEVREAQRLRYLVFAGEMGARLSTSVPGHDVDAFDAYCEHLLVR DVETRAVIGTYRVLTPAQAQRAGGLYSDTEFDLSRLDHLRGRMVELGRSCVHPDYRHGGVIMTLWGALADFMVRNRLDMM IGCASIPMLHNGVLSGNAAASIWNQLKAGYMAPAEYEVQPRLPLPVDQLDGSLPVEPPALIKGYLRLGTRVLGAPAWDPD FNTADLPMLMRIEDLPPRYRKHFLG >Mature_264_residues SFRRSLHRPGPGEVPAPRPGKSAVAPIEASWARDAAEVREAQRLRYLVFAGEMGARLSTSVPGHDVDAFDAYCEHLLVRD VETRAVIGTYRVLTPAQAQRAGGLYSDTEFDLSRLDHLRGRMVELGRSCVHPDYRHGGVIMTLWGALADFMVRNRLDMMI GCASIPMLHNGVLSGNAAASIWNQLKAGYMAPAEYEVQPRLPLPVDQLDGSLPVEPPALIKGYLRLGTRVLGAPAWDPDF NTADLPMLMRIEDLPPRYRKHFLG
Specific function: Unknown
COG id: COG3176
COG function: function code R; Putative hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29294; Mature: 29163
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFRRSLHRPGPGEVPAPRPGKSAVAPIEASWARDAAEVREAQRLRYLVFAGEMGARLST CCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEC SVPGHDVDAFDAYCEHLLVRDVETRAVIGTYRVLTPAQAQRAGGLYSDTEFDLSRLDHLR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHH GRMVELGRSCVHPDYRHGGVIMTLWGALADFMVRNRLDMMIGCASIPMLHNGVLSGNAAA HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHH SIWNQLKAGYMAPAEYEVQPRLPLPVDQLDGSLPVEPPALIKGYLRLGTRVLGAPAWDPD HHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC FNTADLPMLMRIEDLPPRYRKHFLG CCCCCCCCEEEECCCCHHHHHHCCC >Mature Secondary Structure SFRRSLHRPGPGEVPAPRPGKSAVAPIEASWARDAAEVREAQRLRYLVFAGEMGARLST CCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEC SVPGHDVDAFDAYCEHLLVRDVETRAVIGTYRVLTPAQAQRAGGLYSDTEFDLSRLDHLR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHH GRMVELGRSCVHPDYRHGGVIMTLWGALADFMVRNRLDMMIGCASIPMLHNGVLSGNAAA HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHH SIWNQLKAGYMAPAEYEVQPRLPLPVDQLDGSLPVEPPALIKGYLRLGTRVLGAPAWDPD HHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC FNTADLPMLMRIEDLPPRYRKHFLG CCCCCCCCEEEECCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA