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The map label for this gene is ygiK [H]

Identifier: 120611262

GI number: 120611262

Start: 2839635

End: 2840930

Strand: Direct

Name: ygiK [H]

Synonym: Aave_2594

Alternate gene names: 120611262

Gene position: 2839635-2840930 (Clockwise)

Preceding gene: 120611261

Following gene: 120611263

Centisome position: 53.05

GC content: 65.66

Gene sequence:

>1296_bases
ATGACCGTGCCACTCCTGATCCTGTGCGTGTCGTTCACGCTGTTCCTGCTGCTGGGCGTGCCGGTGGCGTTCTCCATCGG
CCTGTCGGCCCTGGCCACGCTGGCCTATGAAGGCCTGCCGCTGGAAGTGGGCTTCCAGCAGATGACCTCCGGCATGGGGA
TCTTCTCGTTCCTGGCGATCCCGTTCTTCATCTTCGCGGGCGAGCTCATGCTGTATGGCGGCATCGCCGACCGCATCGTC
AATTTCGCGCGGGCCCTGGTGGGCCACGTGCGCGGCGGCCTGGGCATGTCCAACGTGGTGGCCTGCACGCTGTTCGGCGG
GGTTTCGGGCTCGCCGGTGGCCGATGTGTCCGCGATGGGCGCGGTGATGATTCCCATGATGAAGAAAGAGGGCTACCACG
CCGACTACGCCGTGAACGTGACGACGCACGCGGCGCTGGTGGGCGCGCTGATGCCGACGAGCCACAACCTCATCATCTAC
TCGCTCGCCGCGGGCGGCAAGGTGTCGATCGCGGCGCTGATCCTGGCGGCACTGATTCCCGCCCTGGTGCTCACGATCAG
CAATCTGGCGGCGGCGTACCTCGTGGCCGTGAAACGCGGCTACCCGAAGGGCACGTTCCCGGGCTGGGACATCGTTGCCC
GCTCGTTCGCGGCGGCGCTGCCGGGCCTCTTCATCGTCGTGCTGATCCTCGGGGGCATCCTCTCGGGCATCTTCACCGCG
ACCGAATCGGCGGCGGTGGCGGTGCTCTACGCGCTGGCGCTGACCATCTTCCTCTACCGCACTTTAACGCGGGAGCATTT
CATCAAGGCTGCCTCCAAGGCCGTGCGCACCACGGGCGTGATCCTGCTGCTGATCGGCATCTCCAGCACTTTCGGCTACC
TCATCAGCCTCTACGGCGTGGCAGAGCTGACGGGCGAGATGCTGTCGCAGGTGACCAGCACGCCCTGGGTGATCTTCCTG
CTCATCAACATCATCCTGTTCGTGCTGGGCACCTTCCTGGACATGGCGGCGACCATCCTGCTGTGCACGCCCATCTTCCT
GCCGATCGCGCAGCACTACGGCATGAGCTCGGTGCAGTTCGGCATCGTGATGCTGATCAACTGCGCGCTGGGCCTGAACA
CGCCGCCCGTGGGAACGACGCAGTTCGTGGGCTGCGCGATCGGCGGGGTGTCGGTGGGCACGGTGATGCGGACCATCTGG
CCGTTCTACGGCGCACTGATCTTCGCGCTCGCGCTGGTCACCTTCGTGCCGTCGTTCTCGACCTGGCTGCCCAGCATGTT
CATGGCGGTGCGCTGA

Upstream 100 bases:

>100_bases
CCCGGCCAGCATCGCCGGCGTGCTCATCGTGCTGTTCTCCGTCGAGCACATCATCGCGCTGGCCCAGGGCCGCGAAGTCG
AACCCGCCTGGGGCTGATCC

Downstream 100 bases:

>100_bases
GGCGCCGCCCGGCCCGCCCCGAAACCATGCGCCGAACGAACACTCCATGACCACGCCCCTGACCATCCGCATGCACGAGG
CCGACAACGTGGCCATCGTG

Product: TRAP dicarboxylate transporter subunit DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 430

Protein sequence:

>431_residues
MTVPLLILCVSFTLFLLLGVPVAFSIGLSALATLAYEGLPLEVGFQQMTSGMGIFSFLAIPFFIFAGELMLYGGIADRIV
NFARALVGHVRGGLGMSNVVACTLFGGVSGSPVADVSAMGAVMIPMMKKEGYHADYAVNVTTHAALVGALMPTSHNLIIY
SLAAGGKVSIAALILAALIPALVLTISNLAAAYLVAVKRGYPKGTFPGWDIVARSFAAALPGLFIVVLILGGILSGIFTA
TESAAVAVLYALALTIFLYRTLTREHFIKAASKAVRTTGVILLLIGISSTFGYLISLYGVAELTGEMLSQVTSTPWVIFL
LINIILFVLGTFLDMAATILLCTPIFLPIAQHYGMSSVQFGIVMLINCALGLNTPPVGTTQFVGCAIGGVSVGTVMRTIW
PFYGALIFALALVTFVPSFSTWLPSMFMAVR

Sequences:

>Translated_431_residues
MTVPLLILCVSFTLFLLLGVPVAFSIGLSALATLAYEGLPLEVGFQQMTSGMGIFSFLAIPFFIFAGELMLYGGIADRIV
NFARALVGHVRGGLGMSNVVACTLFGGVSGSPVADVSAMGAVMIPMMKKEGYHADYAVNVTTHAALVGALMPTSHNLIIY
SLAAGGKVSIAALILAALIPALVLTISNLAAAYLVAVKRGYPKGTFPGWDIVARSFAAALPGLFIVVLILGGILSGIFTA
TESAAVAVLYALALTIFLYRTLTREHFIKAASKAVRTTGVILLLIGISSTFGYLISLYGVAELTGEMLSQVTSTPWVIFL
LINIILFVLGTFLDMAATILLCTPIFLPIAQHYGMSSVQFGIVMLINCALGLNTPPVGTTQFVGCAIGGVSVGTVMRTIW
PFYGALIFALALVTFVPSFSTWLPSMFMAVR
>Mature_430_residues
TVPLLILCVSFTLFLLLGVPVAFSIGLSALATLAYEGLPLEVGFQQMTSGMGIFSFLAIPFFIFAGELMLYGGIADRIVN
FARALVGHVRGGLGMSNVVACTLFGGVSGSPVADVSAMGAVMIPMMKKEGYHADYAVNVTTHAALVGALMPTSHNLIIYS
LAAGGKVSIAALILAALIPALVLTISNLAAAYLVAVKRGYPKGTFPGWDIVARSFAAALPGLFIVVLILGGILSGIFTAT
ESAAVAVLYALALTIFLYRTLTREHFIKAASKAVRTTGVILLLIGISSTFGYLISLYGVAELTGEMLSQVTSTPWVIFLL
INIILFVLGTFLDMAATILLCTPIFLPIAQHYGMSSVQFGIVMLINCALGLNTPPVGTTQFVGCAIGGVSVGTVMRTIWP
FYGALIFALALVTFVPSFSTWLPSMFMAVR

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yiaN/ygiK family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=402, Percent_Identity=29.6019900497512, Blast_Score=187, Evalue=9e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 45291; Mature: 45160

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVPLLILCVSFTLFLLLGVPVAFSIGLSALATLAYEGLPLEVGFQQMTSGMGIFSFLAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHCCCHHHHHHHH
PFFIFAGELMLYGGIADRIVNFARALVGHVRGGLGMSNVVACTLFGGVSGSPVADVSAMG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHH
AVMIPMMKKEGYHADYAVNVTTHAALVGALMPTSHNLIIYSLAAGGKVSIAALILAALIP
HHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
ALVLTISNLAAAYLVAVKRGYPKGTFPGWDIVARSFAAALPGLFIVVLILGGILSGIFTA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TESAAVAVLYALALTIFLYRTLTREHFIKAASKAVRTTGVILLLIGISSTFGYLISLYGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AELTGEMLSQVTSTPWVIFLLINIILFVLGTFLDMAATILLCTPIFLPIAQHYGMSSVQF
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
GIVMLINCALGLNTPPVGTTQFVGCAIGGVSVGTVMRTIWPFYGALIFALALVTFVPSFS
HHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
TWLPSMFMAVR
HHHHHHHHHCC
>Mature Secondary Structure 
TVPLLILCVSFTLFLLLGVPVAFSIGLSALATLAYEGLPLEVGFQQMTSGMGIFSFLAI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHCCCHHHHHHHH
PFFIFAGELMLYGGIADRIVNFARALVGHVRGGLGMSNVVACTLFGGVSGSPVADVSAMG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHH
AVMIPMMKKEGYHADYAVNVTTHAALVGALMPTSHNLIIYSLAAGGKVSIAALILAALIP
HHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
ALVLTISNLAAAYLVAVKRGYPKGTFPGWDIVARSFAAALPGLFIVVLILGGILSGIFTA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TESAAVAVLYALALTIFLYRTLTREHFIKAASKAVRTTGVILLLIGISSTFGYLISLYGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AELTGEMLSQVTSTPWVIFLLINIILFVLGTFLDMAATILLCTPIFLPIAQHYGMSSVQF
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
GIVMLINCALGLNTPPVGTTQFVGCAIGGVSVGTVMRTIWPFYGALIFALALVTFVPSFS
HHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
TWLPSMFMAVR
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]