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The map label for this gene is 120611261

Identifier: 120611261

GI number: 120611261

Start: 2839080

End: 2839631

Strand: Direct

Name: 120611261

Synonym: Aave_2593

Alternate gene names: NA

Gene position: 2839080-2839631 (Clockwise)

Preceding gene: 120611260

Following gene: 120611262

Centisome position: 53.04

GC content: 65.4

Gene sequence:

>552_bases
GTGATCCCCCATCCCCGGGCCATCCCAACGGAAGCCCGGGGATTTTTTTCATCTCCCATCAACATGTACACCCAAATCTG
CCGCACGCTCGCGCGTGCCTGCATGTGGCTGGGCATCCTCGGGCTCGTCGCGGTGATCTGCGCCGTGAGCTGGCAGGTGT
TCGGCCGCTACGTCCTCAACAACACGCCCACCTGGGCGGAAAGCCTGGCCCTGCTGCTGGTGCTCTACGTGACCATGTTC
GGCGTGGCCGTGGGTGTGCGGGACGCCGGGCACATCGGGCTCGAATCCTTCCTCGTGCTGGCGCCCGACTGGCTGCGCCT
GAAGATGGAGTACCTGATCCACGTGCTCATCCTGGTGTTCGGCGCGGCCATGGCATGGAGCTGCGCATCGCTCGCCCAGT
CGGTGTGGGAATACCGCCTGCCCACGCTCTTCATCTCCGAAGGCTGGAAATACGTCCCGGCCAGCATCGCCGGCGTGCTC
ATCGTGCTGTTCTCCGTCGAGCACATCATCGCGCTGGCCCAGGGCCGCGAAGTCGAACCCGCCTGGGGCTGA

Upstream 100 bases:

>100_bases
TCGACAAGGCCCCGTTCCAGGCCGCGATGAAGCCTGTCTATGAAAAGTTCATCACCGACGCGAAGCTGAAGGACCTCGTC
AAGCGCGTGCAGGACACGCA

Downstream 100 bases:

>100_bases
TCCATGACCGTGCCACTCCTGATCCTGTGCGTGTCGTTCACGCTGTTCCTGCTGCTGGGCGTGCCGGTGGCGTTCTCCAT
CGGCCTGTCGGCCCTGGCCA

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: TRAP Family C4-Dicarboxylate Transmembrane Transporter; TRAP Transporter Small Transmembrane Protein; TRAP-Type C4-Dicarboxylate Transport System; Dicarboxylate Transporter Membrane Protein; C4-Dicarboxylate Transport Small Permease Component; C4-Dicarboxylate Transport System Small Permease; TRAP Transporter DctQ-Like Membrane Protein; ABC Transporter Membrane Spanning Protein; C4-Dicarboxylate ABC Transporter Permease Component

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MIPHPRAIPTEARGFFSSPINMYTQICRTLARACMWLGILGLVAVICAVSWQVFGRYVLNNTPTWAESLALLLVLYVTMF
GVAVGVRDAGHIGLESFLVLAPDWLRLKMEYLIHVLILVFGAAMAWSCASLAQSVWEYRLPTLFISEGWKYVPASIAGVL
IVLFSVEHIIALAQGREVEPAWG

Sequences:

>Translated_183_residues
MIPHPRAIPTEARGFFSSPINMYTQICRTLARACMWLGILGLVAVICAVSWQVFGRYVLNNTPTWAESLALLLVLYVTMF
GVAVGVRDAGHIGLESFLVLAPDWLRLKMEYLIHVLILVFGAAMAWSCASLAQSVWEYRLPTLFISEGWKYVPASIAGVL
IVLFSVEHIIALAQGREVEPAWG
>Mature_183_residues
MIPHPRAIPTEARGFFSSPINMYTQICRTLARACMWLGILGLVAVICAVSWQVFGRYVLNNTPTWAESLALLLVLYVTMF
GVAVGVRDAGHIGLESFLVLAPDWLRLKMEYLIHVLILVFGAAMAWSCASLAQSVWEYRLPTLFISEGWKYVPASIAGVL
IVLFSVEHIIALAQGREVEPAWG

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20279; Mature: 20279

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPHPRAIPTEARGFFSSPINMYTQICRTLARACMWLGILGLVAVICAVSWQVFGRYVLN
CCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NTPTWAESLALLLVLYVTMFGVAVGVRDAGHIGLESFLVLAPDWLRLKMEYLIHVLILVF
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
GAAMAWSCASLAQSVWEYRLPTLFISEGWKYVPASIAGVLIVLFSVEHIIALAQGREVEP
HHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AWG
CCC
>Mature Secondary Structure
MIPHPRAIPTEARGFFSSPINMYTQICRTLARACMWLGILGLVAVICAVSWQVFGRYVLN
CCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NTPTWAESLALLLVLYVTMFGVAVGVRDAGHIGLESFLVLAPDWLRLKMEYLIHVLILVF
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
GAAMAWSCASLAQSVWEYRLPTLFISEGWKYVPASIAGVLIVLFSVEHIIALAQGREVEP
HHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AWG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA