Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611249
Identifier: 120611249
GI number: 120611249
Start: 2828074
End: 2828652
Strand: Reverse
Name: 120611249
Synonym: Aave_2581
Alternate gene names: NA
Gene position: 2828652-2828074 (Counterclockwise)
Preceding gene: 120611250
Following gene: 120611248
Centisome position: 52.84
GC content: 70.29
Gene sequence:
>579_bases ATGCAAAAACGTCGCTTCCTGACCCACCTCGGCCTTGCCGGCATGCTGCCCGCCGGCACGGCGCTGGCCCATGCGCCGGC CCAGGCGCAACCCGCGCTGCTCACCGTCGCCGGCGCCATCAGACACCCCAACCGCGGGGCGCTCCAGCCCACGGAAGATC TGCTGGCCGCCAAGCAGGGCGTGCAATTCAGCCAGGCCCGCAGCTTCGATGCGATGGCACTGCAGCAGTTGCCGGCCGTC TCCATCGCGCCCACGCTGGAATACGATGCCCGGCGCCATACCCTCGAAGGCCCGCTGCTCGCCACCGTGATCGCAGCCGC CGGCGTTCCGGAGGACAGCACCGCGACCCTGGTGCTGCGCGCCGTGGACGGCTACAACGCCTCCCTGAGCGTGGCCGACG CCGTACGCTTGCGCATGGTCGTCGCGCTGCGCATGGACGGCGCCCCGCTGCCGCTCGGCGGACTCGGGCCCCAGTGGGCC GTCTATGACGCGGACGCCTTGCCCCAGTTCAAGGACAAACCGCTGAAGGAGCGTTTCGCGCTCGCCCCGTGGGGGCTATA TCTGGTCGAAGTACGCTAG
Upstream 100 bases:
>100_bases CATGGTCCGTCATTCACTGCATGCCGGGCTGTTTCTCTTCCACGACCCCCCGGACCCGGTTCCGTGCAATGCTTGCGCCC TTGACAACCATTGGACGCCC
Downstream 100 bases:
>100_bases GGCGGCCCGAGGATTCTGCTGCGCGGCGGGCCCGGGGGCGGAGTTGGCGCTATGATCCAGCGCGATCACGCACCCTCAGC CCCAACAAAGACAGCATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MQKRRFLTHLGLAGMLPAGTALAHAPAQAQPALLTVAGAIRHPNRGALQPTEDLLAAKQGVQFSQARSFDAMALQQLPAV SIAPTLEYDARRHTLEGPLLATVIAAAGVPEDSTATLVLRAVDGYNASLSVADAVRLRMVVALRMDGAPLPLGGLGPQWA VYDADALPQFKDKPLKERFALAPWGLYLVEVR
Sequences:
>Translated_192_residues MQKRRFLTHLGLAGMLPAGTALAHAPAQAQPALLTVAGAIRHPNRGALQPTEDLLAAKQGVQFSQARSFDAMALQQLPAV SIAPTLEYDARRHTLEGPLLATVIAAAGVPEDSTATLVLRAVDGYNASLSVADAVRLRMVVALRMDGAPLPLGGLGPQWA VYDADALPQFKDKPLKERFALAPWGLYLVEVR >Mature_192_residues MQKRRFLTHLGLAGMLPAGTALAHAPAQAQPALLTVAGAIRHPNRGALQPTEDLLAAKQGVQFSQARSFDAMALQQLPAV SIAPTLEYDARRHTLEGPLLATVIAAAGVPEDSTATLVLRAVDGYNASLSVADAVRLRMVVALRMDGAPLPLGGLGPQWA VYDADALPQFKDKPLKERFALAPWGLYLVEVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20403; Mature: 20403
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKRRFLTHLGLAGMLPAGTALAHAPAQAQPALLTVAGAIRHPNRGALQPTEDLLAAKQG CCCHHHHHHHCHHHCCCCCCHHHCCCCCCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHCC VQFSQARSFDAMALQQLPAVSIAPTLEYDARRHTLEGPLLATVIAAAGVPEDSTATLVLR CCHHHHCCHHHHHHHHCCCCEECCCCCCCCHHHCCCCHHHHHHHHHCCCCCCCCEEEEEE AVDGYNASLSVADAVRLRMVVALRMDGAPLPLGGLGPQWAVYDADALPQFKDKPLKERFA EECCCCCEEHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHC LAPWGLYLVEVR CCCCCEEEEEEC >Mature Secondary Structure MQKRRFLTHLGLAGMLPAGTALAHAPAQAQPALLTVAGAIRHPNRGALQPTEDLLAAKQG CCCHHHHHHHCHHHCCCCCCHHHCCCCCCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHCC VQFSQARSFDAMALQQLPAVSIAPTLEYDARRHTLEGPLLATVIAAAGVPEDSTATLVLR CCHHHHCCHHHHHHHHCCCCEECCCCCCCCHHHCCCCHHHHHHHHHCCCCCCCCEEEEEE AVDGYNASLSVADAVRLRMVVALRMDGAPLPLGGLGPQWAVYDADALPQFKDKPLKERFA EECCCCCEEHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHC LAPWGLYLVEVR CCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA