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The map label for this gene is 120611248

Identifier: 120611248

GI number: 120611248

Start: 2827619

End: 2827978

Strand: Reverse

Name: 120611248

Synonym: Aave_2580

Alternate gene names: NA

Gene position: 2827978-2827619 (Counterclockwise)

Preceding gene: 120611249

Following gene: 120611246

Centisome position: 52.83

GC content: 63.89

Gene sequence:

>360_bases
ATGAAGAGTTTGAAGACGCTGCTTGCAGAGCAGGCAGCTTTGGACGCGGCCATCGCCCGCGAGAAAAAGCAGGCAGCCGC
CCAGGCCCTGAGCCAGATACAGGCCTTGATTGCAGAGTTCGGGTTCACCGCCCAGCAGGTATTTCCCTGGCAACCCACCA
GGAAACACGTTCCCGCCAAATACCTGGATCCGAAAACCGGTGCGACCTGGACGGGCCGCGGCAAGCCTCCCGCATGGATT
GCCGGCAAGGACCGCGACCAGTTCCTGATCGAGAAGACGGTCACGCAGCCGGCCCAGCAAGGCCCCTTCCTGGCCGAAAT
GGCGGCTGCTGCGGCAGCGGCCCGACGCGACGGACGTTGA

Upstream 100 bases:

>100_bases
GCTAGGGCGGCCCGAGGATTCTGCTGCGCGGCGGGCCCGGGGGCGGAGTTGGCGCTATGATCCAGCGCGATCACGCACCC
TCAGCCCCAACAAAGACAGC

Downstream 100 bases:

>100_bases
ACCAGCCCCCTTCCGGAACCTGCTCCGCCGGTCACCCCTGGCTAGCGGCCCGGCGCGACTTTGCCGCGACCGTACCGGCT
CCCTCAAGAGTCCATGGGAC

Product: histone family protein nucleoid-structuring protein H-NS

Products: NA

Alternate protein names: Histone-Like Nucleoid-Structuring Protein H-NS

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MKSLKTLLAEQAALDAAIAREKKQAAAQALSQIQALIAEFGFTAQQVFPWQPTRKHVPAKYLDPKTGATWTGRGKPPAWI
AGKDRDQFLIEKTVTQPAQQGPFLAEMAAAAAAARRDGR

Sequences:

>Translated_119_residues
MKSLKTLLAEQAALDAAIAREKKQAAAQALSQIQALIAEFGFTAQQVFPWQPTRKHVPAKYLDPKTGATWTGRGKPPAWI
AGKDRDQFLIEKTVTQPAQQGPFLAEMAAAAAAARRDGR
>Mature_119_residues
MKSLKTLLAEQAALDAAIAREKKQAAAQALSQIQALIAEFGFTAQQVFPWQPTRKHVPAKYLDPKTGATWTGRGKPPAWI
AGKDRDQFLIEKTVTQPAQQGPFLAEMAAAAAAARRDGR

Specific function: Unknown

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12898; Mature: 12898

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLKTLLAEQAALDAAIAREKKQAAAQALSQIQALIAEFGFTAQQVFPWQPTRKHVPAK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCH
YLDPKTGATWTGRGKPPAWIAGKDRDQFLIEKTVTQPAQQGPFLAEMAAAAAAARRDGR
HCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKSLKTLLAEQAALDAAIAREKKQAAAQALSQIQALIAEFGFTAQQVFPWQPTRKHVPAK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCH
YLDPKTGATWTGRGKPPAWIAGKDRDQFLIEKTVTQPAQQGPFLAEMAAAAAAARRDGR
HCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA