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The map label for this gene is exbD [C]

Identifier: 120611234

GI number: 120611234

Start: 2816497

End: 2816922

Strand: Reverse

Name: exbD [C]

Synonym: Aave_2565

Alternate gene names: 120611234

Gene position: 2816922-2816497 (Counterclockwise)

Preceding gene: 120611235

Following gene: 120611233

Centisome position: 52.63

GC content: 67.14

Gene sequence:

>426_bases
ATGAATTTCCGCCCCCGTCCCAAGGAAGAGCCGGAGATCAACCTGATCCCGTTCATCGACGTGCTGCTCGTGATCCTCAT
CTTCCTGATGCTCTCGACCACGTACAGCAAGTTCACCGAACTGCAGCTCACGCTCCCGGTGGCGGACGCGGAACAGCAGC
GCGACCATCCCAAGGAAGTGATCGTCGCGGTCGCCGCCGATGGGCGCTACGCCGTCAACAAGACGGCCGTGGAAGGCAAG
GGCGTGGAAGCGATCGCGCAGGCCCTCGGGGCCGCCGCGCAGGCCGGGCGCGACAGCGTGGTGATCATCAGCGCCGATGC
CAGCGCCCCGCACCAGGCCGTGATTTCCGTGATGGAAGCCGCGCGCCGCGCGGGCCTGTCGCAGATCACCTTCGCCACGC
AATCGTCCGCCAGCGCGGGCCGCTGA

Upstream 100 bases:

>100_bases
GGTATTTCCGCAGCCGCGTGGACGCCTACCTGCTCACGCTGGAGCTCGCCTCCGAGCAGTTCGTCCGCCACCTCCTGCGC
CTGCGCAAGTGAGCGGCGCG

Downstream 100 bases:

>100_bases
TCCGCATGGCGCAGCCACGCCGCCGCGGACGATCCGCGCCGGACGCGACGCCGGGGATCCAGCGGGTGTGGCGCCACCGC
GGCGCGATGGCCTGGCTGCT

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: Biopolymer Transport ExbD-Related Transmembrane Protein; Biopolymer Transport; Biopolymer Transporter; Biopolymer Transport Protein ExbD; Iopolymer Transport ExbD2 Protein; Biopolymer ExbD/lR Family Transporter; Biopolymer Transport Protein Exbd/lr

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MNFRPRPKEEPEINLIPFIDVLLVILIFLMLSTTYSKFTELQLTLPVADAEQQRDHPKEVIVAVAADGRYAVNKTAVEGK
GVEAIAQALGAAAQAGRDSVVIISADASAPHQAVISVMEAARRAGLSQITFATQSSASAGR

Sequences:

>Translated_141_residues
MNFRPRPKEEPEINLIPFIDVLLVILIFLMLSTTYSKFTELQLTLPVADAEQQRDHPKEVIVAVAADGRYAVNKTAVEGK
GVEAIAQALGAAAQAGRDSVVIISADASAPHQAVISVMEAARRAGLSQITFATQSSASAGR
>Mature_141_residues
MNFRPRPKEEPEINLIPFIDVLLVILIFLMLSTTYSKFTELQLTLPVADAEQQRDHPKEVIVAVAADGRYAVNKTAVEGK
GVEAIAQALGAAAQAGRDSVVIISADASAPHQAVISVMEAARRAGLSQITFATQSSASAGR

Specific function: Involved In The Tonb-Dependent Energy-Dependent Transport Of Various Receptor-Bound Substrates. [C]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Type II Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789380, Length=131, Percent_Identity=27.4809160305344, Blast_Score=60, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15000; Mature: 15000

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFRPRPKEEPEINLIPFIDVLLVILIFLMLSTTYSKFTELQLTLPVADAEQQRDHPKEV
CCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHCCCCCE
IVAVAADGRYAVNKTAVEGKGVEAIAQALGAAAQAGRDSVVIISADASAPHQAVISVMEA
EEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH
ARRAGLSQITFATQSSASAGR
HHHCCCHHEEEECCCCCCCCC
>Mature Secondary Structure
MNFRPRPKEEPEINLIPFIDVLLVILIFLMLSTTYSKFTELQLTLPVADAEQQRDHPKEV
CCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHCCCCCE
IVAVAADGRYAVNKTAVEGKGVEAIAQALGAAAQAGRDSVVIISADASAPHQAVISVMEA
EEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH
ARRAGLSQITFATQSSASAGR
HHHCCCHHEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA