Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611226
Identifier: 120611226
GI number: 120611226
Start: 2810085
End: 2810564
Strand: Reverse
Name: 120611226
Synonym: Aave_2557
Alternate gene names: NA
Gene position: 2810564-2810085 (Counterclockwise)
Preceding gene: 120611227
Following gene: 120611224
Centisome position: 52.51
GC content: 73.96
Gene sequence:
>480_bases ATGGCAAAGGCTTTGCTCGATTTCGCCACCCTCTCGTCCTGCCTGCAGCCGCTGCACGGCCTCGTCCGCTGGCTGCGGGG TACTTCCTCGGGGAATGCGTCCGGCCGCCTCGCCGCACGGTCGCGCTGGCCGGACTGTCCAGCCCACGGTCGCGGGGCAT CCGACACGTCCACCGCCAACCACCACCCCTGCGACTGCCCGCCAGCCGCTACGGCCCATGGCAGCGCAGAGGCCGGTGCT GCCGCATCCGTGGCACTGCCCGCAGATGCCTCCGCCGCACTGCACTCGACCACGGTGGAGCGCCCCGCGCGCACGCCGGC CGGCAGCCAGCGCACCTGCGCGGCGCGGGTACCGGGCGCGGTGCGGGTGGTGCAGCGCCGGCAGGCGGGTACGCCGGAAC GCTTCGTGATCTCCGGCCGCATGGCCGATGTGCGGGCGGAACTGGAGCGCTGGGCCGCGGCGGAAGCCGTGCTGCAATGA
Upstream 100 bases:
>100_bases CTTTCCTCTTCGTGTGGATGGTCAACCCTGCGGCATCGCCCTGCCCGTCTAAAGCCAATCCTGCCAGTGTTCAACCCATT CTGACCGCTGGAGTTTTTCC
Downstream 100 bases:
>100_bases TCTGCAGCAGGCGGCCCTCGGCCGCCGCCGTTGCCCGCCGCGTCAGCTGTTGATCTGCGCCCAGAGCTTGTCCAGGCGCT TCACGCTCACGGGCTGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MAKALLDFATLSSCLQPLHGLVRWLRGTSSGNASGRLAARSRWPDCPAHGRGASDTSTANHHPCDCPPAATAHGSAEAGA AASVALPADASAALHSTTVERPARTPAGSQRTCAARVPGAVRVVQRRQAGTPERFVISGRMADVRAELERWAAAEAVLQ
Sequences:
>Translated_159_residues MAKALLDFATLSSCLQPLHGLVRWLRGTSSGNASGRLAARSRWPDCPAHGRGASDTSTANHHPCDCPPAATAHGSAEAGA AASVALPADASAALHSTTVERPARTPAGSQRTCAARVPGAVRVVQRRQAGTPERFVISGRMADVRAELERWAAAEAVLQ >Mature_158_residues AKALLDFATLSSCLQPLHGLVRWLRGTSSGNASGRLAARSRWPDCPAHGRGASDTSTANHHPCDCPPAATAHGSAEAGAA ASVALPADASAALHSTTVERPARTPAGSQRTCAARVPGAVRVVQRRQAGTPERFVISGRMADVRAELERWAAAEAVLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16452; Mature: 16320
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKALLDFATLSSCLQPLHGLVRWLRGTSSGNASGRLAARSRWPDCPAHGRGASDTSTAN CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC HHPCDCPPAATAHGSAEAGAAASVALPADASAALHSTTVERPARTPAGSQRTCAARVPGA CCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHCCHH VRVVQRRQAGTPERFVISGRMADVRAELERWAAAEAVLQ HHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AKALLDFATLSSCLQPLHGLVRWLRGTSSGNASGRLAARSRWPDCPAHGRGASDTSTAN CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC HHPCDCPPAATAHGSAEAGAAASVALPADASAALHSTTVERPARTPAGSQRTCAARVPGA CCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHCCHH VRVVQRRQAGTPERFVISGRMADVRAELERWAAAEAVLQ HHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA