Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is zraS [C]
Identifier: 120611204
GI number: 120611204
Start: 2783027
End: 2785093
Strand: Direct
Name: zraS [C]
Synonym: Aave_2535
Alternate gene names: 120611204
Gene position: 2783027-2785093 (Clockwise)
Preceding gene: 120611203
Following gene: 120611205
Centisome position: 51.99
GC content: 70.15
Gene sequence:
>2067_bases ATGAGTGTTCCTTCCCCCACGCATTCCGACTTCCTGCGGACCGCCGGCGAGATGAGCGAGCGCGTGCGCCGGCACGACTG GTCCTCCACGCCGCTCGGCCCCATGGAGTCCTGGCCCGAGGCGTTGCGGGTGGCGGTGCAGATGGTGCTGGCGTCGCGCT TCCCCAAGTGCCTGGCCTGGGGGCCGGAAATGGTCTCCATCTACAACGATGCCTTCCGTGTCATCCTGGGGGCCAAGCCC GAAGCGCTGGGCCGGTCTTTCTACGATGTCTGGGCCGAAGCGTGGGAGACAATCGGCCCGCTGGCCGAGCGCGCGCTCGC CGGGGATTCCGTGTTCCTGGAAGACTTCCCGCTGGTGGTGCGCCGCCAGGGCTACGACGAGCAGGCCTACTTCACCTTCT GCTACAGCCCGGTCTGCGATGGCTCCGGCACCGTGGTGGGCTTCATGGACACGGTGGTCGAGACCACCGGCAAGTTCCTG GCCCAGCAGCGGCTGCAGGACCTGGCCGCCACGCTGGATCAGCAGGTGGCCGACCGCACGGCCGACCGCAACCGGCTCTG GCTGCTGTCGGACGCCATGCTGGTCGTCACGCGGCTCGACGGCACCATCGCCGCCGTCAATCCCGCGTGGCAGGCCACGC TGGGCTATTCCGAGGACGAGACCATCGGCCGGCGCATCCTCTCCTTCATCCATGACGACGAGGCGGTGCGCGTGCCGGAC GACGTGCAGCGCCTGGCCGAGGCCGTGCGCCACCAGGCCACGCTGCGCTTTCGCCACCGCAGCGGCGCCGACCGCTGGAT CGACTGGACCGCGGTGCCCGGCGACGGCTTCGTGCAGGCCGTGGGCCGCGACGTGACCGACGAGCGCGCCCGCACCGAAG CCCTGCTGCAGTCCCAGGAGCGCGTGCGCCACAGCCAGAAGATGGAGGCGATCGGGCAGCTCACGGGCGGCATCGCGCAC GACTTCAACAACATGCTGCAGGGCGTGGTGCTGCCCCTGCAGTTGATCGGCCAGCGCCATGCGCGCGGCCACATGGACGA CATTCCCCGCTACGTGGAGGCCGGCCTGTCGTCGGCCCGGCGCGCCGCCGCGCTCACGCAGCGGCTGCTGGCCTTCTCGC GGCGCCAGCCGCTGGACGTGCGCCCGGTGGATGCCGCCGCGTCCATCCGCAACCTGGAGCCCATGCTGCGCAACACCTGC GGGGAAAACACTCGCCTGGACATCGAGATTCCCGAGGATCTCTGGCCGGTGCTCACCGATGTCCACCAGCTCGAGAGCGC GGTGCTCAACCTGGCCATCAATGCCCGCGACGCCATGCCCGAAGGCGGGCGCCTGCGCATCGCCGGGGACAACCTGGGTG GAGCGCAGGCGCTGCCTCCCCAGGTACGCGAGGCGCTCGGGCTGCCGCCGGGCGACCTGGTGCGCCTGCAGGTGAGCGAT ACCGGCCACGGCATGTCCAAGGAAGTGCTGGACCTGGCCTTCGATCCGTTCTTCACCACCAAGCCGATCGGGCAGGGAAC GGGGCTGGGCCTGTCGATGATCTACGGCTACATGCGCCAGTCGGGCGGCGCCGTGGCGCTGGAAAGCGAAGAGGGGCGCG GCACCTGCGTGTCGCTCTACTTTCCGCGCTCGTCCGAGGAGGTCAGCGACGAGGCGCCTGCCGGCCTGGACAGTGCCGAG GCGGGCAAGCGGCCGGATTCGGTGCTGGTGGTGGAGGACGACGCCACGGTGCGCGAGTTCGTGTGCGAACTGCTGCGCGA CCTCGGCTTCCAGGTGCTGTCGGCCAGCTCAGGCGCCGGGGGCATGGCGATGCTGTCGGGCGCCATCCACTTCGACCTGC TGGTGTCCGACGTGGGGCTGCCGGGGCCCAATGGCCGGCAGGTGGCGGATTTCGCGCGCGAGCGTCTTCCCGGCATCCTG GTGCTGCTCATGACGGGCTACGCCGAGCAGGCGGCCATGGATCCCGGCTTCCTGGCCGCCCACCACATGGAGCTCATCGT CAAGCCGTTCGATGCCCAGGCGCTGGTGCGGAAGGTGCTGGACATGGTGGGCACGCCCGGCCACTGA
Upstream 100 bases:
>100_bases CGGCCGTGTTCCGGTCGGCGGAACAGCCCCTCGTGCCCCTGCGGGCGCAATGGCGGTTGGTGCGGAGGGGCGCTTTGGCC ATGTCATCATCGCCCCCGAC
Downstream 100 bases:
>100_bases GCGGCTCGGGCCGGCGAAACCCCGGAAAGCCCGCGAAACCCCGCTGCGACCGCAGGACGGGCCGGGTGTTGCACAATCCC CTCCCTCATAACCGCGGCGT
Product: PAS/PAC sensor hybrid histidine kinase
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 688; Mature: 687
Protein sequence:
>688_residues MSVPSPTHSDFLRTAGEMSERVRRHDWSSTPLGPMESWPEALRVAVQMVLASRFPKCLAWGPEMVSIYNDAFRVILGAKP EALGRSFYDVWAEAWETIGPLAERALAGDSVFLEDFPLVVRRQGYDEQAYFTFCYSPVCDGSGTVVGFMDTVVETTGKFL AQQRLQDLAATLDQQVADRTADRNRLWLLSDAMLVVTRLDGTIAAVNPAWQATLGYSEDETIGRRILSFIHDDEAVRVPD DVQRLAEAVRHQATLRFRHRSGADRWIDWTAVPGDGFVQAVGRDVTDERARTEALLQSQERVRHSQKMEAIGQLTGGIAH DFNNMLQGVVLPLQLIGQRHARGHMDDIPRYVEAGLSSARRAAALTQRLLAFSRRQPLDVRPVDAAASIRNLEPMLRNTC GENTRLDIEIPEDLWPVLTDVHQLESAVLNLAINARDAMPEGGRLRIAGDNLGGAQALPPQVREALGLPPGDLVRLQVSD TGHGMSKEVLDLAFDPFFTTKPIGQGTGLGLSMIYGYMRQSGGAVALESEEGRGTCVSLYFPRSSEEVSDEAPAGLDSAE AGKRPDSVLVVEDDATVREFVCELLRDLGFQVLSASSGAGGMAMLSGAIHFDLLVSDVGLPGPNGRQVADFARERLPGIL VLLMTGYAEQAAMDPGFLAAHHMELIVKPFDAQALVRKVLDMVGTPGH
Sequences:
>Translated_688_residues MSVPSPTHSDFLRTAGEMSERVRRHDWSSTPLGPMESWPEALRVAVQMVLASRFPKCLAWGPEMVSIYNDAFRVILGAKP EALGRSFYDVWAEAWETIGPLAERALAGDSVFLEDFPLVVRRQGYDEQAYFTFCYSPVCDGSGTVVGFMDTVVETTGKFL AQQRLQDLAATLDQQVADRTADRNRLWLLSDAMLVVTRLDGTIAAVNPAWQATLGYSEDETIGRRILSFIHDDEAVRVPD DVQRLAEAVRHQATLRFRHRSGADRWIDWTAVPGDGFVQAVGRDVTDERARTEALLQSQERVRHSQKMEAIGQLTGGIAH DFNNMLQGVVLPLQLIGQRHARGHMDDIPRYVEAGLSSARRAAALTQRLLAFSRRQPLDVRPVDAAASIRNLEPMLRNTC GENTRLDIEIPEDLWPVLTDVHQLESAVLNLAINARDAMPEGGRLRIAGDNLGGAQALPPQVREALGLPPGDLVRLQVSD TGHGMSKEVLDLAFDPFFTTKPIGQGTGLGLSMIYGYMRQSGGAVALESEEGRGTCVSLYFPRSSEEVSDEAPAGLDSAE AGKRPDSVLVVEDDATVREFVCELLRDLGFQVLSASSGAGGMAMLSGAIHFDLLVSDVGLPGPNGRQVADFARERLPGIL VLLMTGYAEQAAMDPGFLAAHHMELIVKPFDAQALVRKVLDMVGTPGH >Mature_687_residues SVPSPTHSDFLRTAGEMSERVRRHDWSSTPLGPMESWPEALRVAVQMVLASRFPKCLAWGPEMVSIYNDAFRVILGAKPE ALGRSFYDVWAEAWETIGPLAERALAGDSVFLEDFPLVVRRQGYDEQAYFTFCYSPVCDGSGTVVGFMDTVVETTGKFLA QQRLQDLAATLDQQVADRTADRNRLWLLSDAMLVVTRLDGTIAAVNPAWQATLGYSEDETIGRRILSFIHDDEAVRVPDD VQRLAEAVRHQATLRFRHRSGADRWIDWTAVPGDGFVQAVGRDVTDERARTEALLQSQERVRHSQKMEAIGQLTGGIAHD FNNMLQGVVLPLQLIGQRHARGHMDDIPRYVEAGLSSARRAAALTQRLLAFSRRQPLDVRPVDAAASIRNLEPMLRNTCG ENTRLDIEIPEDLWPVLTDVHQLESAVLNLAINARDAMPEGGRLRIAGDNLGGAQALPPQVREALGLPPGDLVRLQVSDT GHGMSKEVLDLAFDPFFTTKPIGQGTGLGLSMIYGYMRQSGGAVALESEEGRGTCVSLYFPRSSEEVSDEAPAGLDSAEA GKRPDSVLVVEDDATVREFVCELLRDLGFQVLSASSGAGGMAMLSGAIHFDLLVSDVGLPGPNGRQVADFARERLPGILV LLMTGYAEQAAMDPGFLAAHHMELIVKPFDAQALVRKVLDMVGTPGH
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=253, Percent_Identity=25.296442687747, Blast_Score=89, Evalue=7e-19, Organism=Escherichia coli, GI1788549, Length=363, Percent_Identity=25.3443526170799, Blast_Score=87, Evalue=4e-18, Organism=Escherichia coli, GI48994928, Length=513, Percent_Identity=22.2222222222222, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 75197; Mature: 75066
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS50112 PAS ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVPSPTHSDFLRTAGEMSERVRRHDWSSTPLGPMESWPEALRVAVQMVLASRFPKCLAW CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHC GPEMVSIYNDAFRVILGAKPEALGRSFYDVWAEAWETIGPLAERALAGDSVFLEDFPLVV CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCHHH RRQGYDEQAYFTFCYSPVCDGSGTVVGFMDTVVETTGKFLAQQRLQDLAATLDQQVADRT HCCCCCCCEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ADRNRLWLLSDAMLVVTRLDGTIAAVNPAWQATLGYSEDETIGRRILSFIHDDEAVRVPD CCCCEEEEEECCEEEEEECCCCEEECCCCHHHHCCCCCCHHHHHHHHHHHCCCCCEECCH DVQRLAEAVRHQATLRFRHRSGADRWIDWTAVPGDGFVQAVGRDVTDERARTEALLQSQE HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHH RVRHSQKMEAIGQLTGGIAHDFNNMLQGVVLPLQLIGQRHARGHMDDIPRYVEAGLSSAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHH RAAALTQRLLAFSRRQPLDVRPVDAAASIRNLEPMLRNTCGENTRLDIEIPEDLWPVLTD HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHH VHQLESAVLNLAINARDAMPEGGRLRIAGDNLGGAQALPPQVREALGLPPGDLVRLQVSD HHHHHHHHHHHHEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEEEECC TGHGMSKEVLDLAFDPFFTTKPIGQGTGLGLSMIYGYMRQSGGAVALESEEGRGTCVSLY CCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEE FPRSSEEVSDEAPAGLDSAEAGKRPDSVLVVEDDATVREFVCELLRDLGFQVLSASSGAG ECCCCCCCCCCCCCCCCCHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCHHEEECCCCCC GMAMLSGAIHFDLLVSDVGLPGPNGRQVADFARERLPGILVLLMTGYAEQAAMDPGFLAA CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEHHHHCCHHHHCCCCCHHHH HHMELIVKPFDAQALVRKVLDMVGTPGH HHHHHHCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure SVPSPTHSDFLRTAGEMSERVRRHDWSSTPLGPMESWPEALRVAVQMVLASRFPKCLAW CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHC GPEMVSIYNDAFRVILGAKPEALGRSFYDVWAEAWETIGPLAERALAGDSVFLEDFPLVV CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCHHH RRQGYDEQAYFTFCYSPVCDGSGTVVGFMDTVVETTGKFLAQQRLQDLAATLDQQVADRT HCCCCCCCEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ADRNRLWLLSDAMLVVTRLDGTIAAVNPAWQATLGYSEDETIGRRILSFIHDDEAVRVPD CCCCEEEEEECCEEEEEECCCCEEECCCCHHHHCCCCCCHHHHHHHHHHHCCCCCEECCH DVQRLAEAVRHQATLRFRHRSGADRWIDWTAVPGDGFVQAVGRDVTDERARTEALLQSQE HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHH RVRHSQKMEAIGQLTGGIAHDFNNMLQGVVLPLQLIGQRHARGHMDDIPRYVEAGLSSAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHH RAAALTQRLLAFSRRQPLDVRPVDAAASIRNLEPMLRNTCGENTRLDIEIPEDLWPVLTD HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHH VHQLESAVLNLAINARDAMPEGGRLRIAGDNLGGAQALPPQVREALGLPPGDLVRLQVSD HHHHHHHHHHHHEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEEEECC TGHGMSKEVLDLAFDPFFTTKPIGQGTGLGLSMIYGYMRQSGGAVALESEEGRGTCVSLY CCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEE FPRSSEEVSDEAPAGLDSAEAGKRPDSVLVVEDDATVREFVCELLRDLGFQVLSASSGAG ECCCCCCCCCCCCCCCCCHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCHHEEECCCCCC GMAMLSGAIHFDLLVSDVGLPGPNGRQVADFARERLPGILVLLMTGYAEQAAMDPGFLAA CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEHHHHCCHHHHCCCCCHHHH HHMELIVKPFDAQALVRKVLDMVGTPGH HHHHHHCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA