Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120611183
Identifier: 120611183
GI number: 120611183
Start: 2754731
End: 2755270
Strand: Direct
Name: 120611183
Synonym: Aave_2514
Alternate gene names: NA
Gene position: 2754731-2755270 (Clockwise)
Preceding gene: 120611182
Following gene: 120611184
Centisome position: 51.46
GC content: 60.56
Gene sequence:
>540_bases ATGAAAACCGTCTGGATCATCGATGGCGCCTACCTCTTCAACTACGGCAAGAGCAAGCCCTTCGACTACCTCAAGCTGAA GAACGAGATCACCCGGCTGAACGGCGGGCCGATCCGCGAGAGCTACTACCTGAACTCCGTCAGCGACCCTGCCACGGATG CGCAGAACGCGTTCCATTCGTGGATCAAGACCGCGCCTCCCCACGGGCCGAAGTTCCGCGTGCAGCTCTACAAGCTCAAG AAGATGCACATGAACTGCGCGGCATGCGGCCATTCGTCCGACCGGTGGGTCCAGAAGGGTGTGGACGTGGGCATCGCCAC GCTGATCATCAAGCTCGCCGCGCAGAACGTGTACGACCGGCTGATCCTCTCCGCAGGAGACGGCGATTTCGAGGACGCGA TCTCCTACGTCAAATCCGAATTGCACAAGGAGGTGTGGGTGTCGGGCTCCGCGGCCAGCCTGTCTCCTGACCTGCAGTCG TATTCGGACAACGTCCTCTGGATGGAGGACATGAGCCCGACCATCGACCGGATCTCCTGA
Upstream 100 bases:
>100_bases AAGATCGAGAACCCGTGGCGCAAGCACGGCAACATTCCATTGTGAGCCGCCGCACCGCGAAGCCCTGCACGGCCGCTCGG ACGAACCTCCCGGGAGCACG
Downstream 100 bases:
>100_bases TCGCCTGCCCGGCGCCTCCATCCACGTTCGCCCGCAACCCAACTTTCGACGCATCATGTTCACCAAAATCCTCATTGCCA ACCGCGGCGAGATCGCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MKTVWIIDGAYLFNYGKSKPFDYLKLKNEITRLNGGPIRESYYLNSVSDPATDAQNAFHSWIKTAPPHGPKFRVQLYKLK KMHMNCAACGHSSDRWVQKGVDVGIATLIIKLAAQNVYDRLILSAGDGDFEDAISYVKSELHKEVWVSGSAASLSPDLQS YSDNVLWMEDMSPTIDRIS
Sequences:
>Translated_179_residues MKTVWIIDGAYLFNYGKSKPFDYLKLKNEITRLNGGPIRESYYLNSVSDPATDAQNAFHSWIKTAPPHGPKFRVQLYKLK KMHMNCAACGHSSDRWVQKGVDVGIATLIIKLAAQNVYDRLILSAGDGDFEDAISYVKSELHKEVWVSGSAASLSPDLQS YSDNVLWMEDMSPTIDRIS >Mature_179_residues MKTVWIIDGAYLFNYGKSKPFDYLKLKNEITRLNGGPIRESYYLNSVSDPATDAQNAFHSWIKTAPPHGPKFRVQLYKLK KMHMNCAACGHSSDRWVQKGVDVGIATLIIKLAAQNVYDRLILSAGDGDFEDAISYVKSELHKEVWVSGSAASLSPDLQS YSDNVLWMEDMSPTIDRIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20092; Mature: 20092
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTVWIIDGAYLFNYGKSKPFDYLKLKNEITRLNGGPIRESYYLNSVSDPATDAQNAFHS CCEEEEECCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHH WIKTAPPHGPKFRVQLYKLKKMHMNCAACGHSSDRWVQKGVDVGIATLIIKLAAQNVYDR HHHCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHH LILSAGDGDFEDAISYVKSELHKEVWVSGSAASLSPDLQSYSDNVLWMEDMSPTIDRIS HHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCEEEECCCCCHHHCCC >Mature Secondary Structure MKTVWIIDGAYLFNYGKSKPFDYLKLKNEITRLNGGPIRESYYLNSVSDPATDAQNAFHS CCEEEEECCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHH WIKTAPPHGPKFRVQLYKLKKMHMNCAACGHSSDRWVQKGVDVGIATLIIKLAAQNVYDR HHHCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHH LILSAGDGDFEDAISYVKSELHKEVWVSGSAASLSPDLQSYSDNVLWMEDMSPTIDRIS HHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCEEEECCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA