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The map label for this gene is yggR [H]

Identifier: 120611154

GI number: 120611154

Start: 2716470

End: 2717633

Strand: Reverse

Name: yggR [H]

Synonym: Aave_2483

Alternate gene names: 120611154

Gene position: 2717633-2716470 (Counterclockwise)

Preceding gene: 120611155

Following gene: 120611153

Centisome position: 50.77

GC content: 66.67

Gene sequence:

>1164_bases
ATGAGCACGATGGAGCGGATTCTCCGGCTGATGGCCGAGAAGCGGGCCTCGGACGTCTATCTCTCGGCCAACGCCCCGGT
CCTCATCAAGATCAACGGCGAGTGCGTGCCCGTCAACAGCCAGTTGCTGCCGTTCGATGCGCCGAAGAATCTGCTGGCCG
AGATCGTGCCGCCGGACCGCATCGAGGAGCTGGAGGAGACGGGCGAGCTCAACATGGGCGTGCCGCTCACGGGCGTGGGC
CGCTTCCGCGTGAGTGCCATGCGCCAGCGCGGCAGCTACGCGGTGGTGGTGCGGTTCATCGCGCAGCACATCCCGGAGCT
GCCCAGCCTCAACCTGCCGCCCATCCTCGGGGAGCTGATTCTCGAAAAACGCGGCCTGCTGCTGGTCGTGGGGGCGACGG
GCTCGGGCAAGAGCACCACGCTGGCCTCGATGATCGACAGCCGCAACGCGCAGCTCACGGGACACATCCTCACGGTGGAA
GACCCGGTCGAGTACCAGTTCAAGAACAAGAAATCGATCGTCAACCAGCGCGAGATCGGCTCCGACACCCAGTCCCTGCA
GACGGCGCTGAAGAACGCGCTGCGGCAGGCGCCCGACGTGATCCTGATCGGCGAGATCCGCGACCGCGAGACCATGTCCG
CCGCCATCGCGTACGCGCAGTCGGGCCACCTGTGCCTCGCCACCCTGCACGGCAACAACAGCTACCACGCGCTGAACCGG
ATCCTCAGCTTCTACCCGGTGGAAGTGCGCCCCACCATGCTGGGCGACCTGGCCTCCGCCCTGAAGGCCATCGTCTCGCA
GCGCCTCGTGCGTTCCCCCACCGGCGAGCGCCTGCCCGCGGTGGAAGTGCTGCTCAACACCAAGCTCGTGGGCGAGATGA
TCGAGCAGGGCAACTTCTCCGGCGTGCGCGAGGCCATGGAAAAATCCATGGCCGAGGGCTCGCAGACCTTCGAGCACGAC
CTGGCACGCCTGGTCGTCGAAGGCCGCATCGACCGCAAGGAAGGCCTGGCCTACGCGGATTCGCCCACCAACCTGATGTG
GCGCCTGCAGAACGACTTCTCGATCGCCGCCAAGGCCGCCCGCGACCGCAAGGACGCGGGCGCACAGGACGACGAAGACC
AGCCCTCGTTCACCGAGATCGTCCTGGACGTCAAGCCCCAGTGA

Upstream 100 bases:

>100_bases
CTGAACGACCTGCTGCGCGACTGACAGCCGGCGCCGCGGCCTCCGGCACCCGCCGGGCCGCGGCTACCCGCCCTTCCACC
ACCTTCGCAAGGGACACCCC

Downstream 100 bases:

>100_bases
TCCCGCGCGCCGGCCCGGGCCCGTGCACCGGGCCTCGGCCGGCGCCATTTTTCCACCTTCCCCCAGGAGCGTTCCAGCGC
GCTCCGCGTCCACGATGTCC

Product: twitching motility protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MSTMERILRLMAEKRASDVYLSANAPVLIKINGECVPVNSQLLPFDAPKNLLAEIVPPDRIEELEETGELNMGVPLTGVG
RFRVSAMRQRGSYAVVVRFIAQHIPELPSLNLPPILGELILEKRGLLLVVGATGSGKSTTLASMIDSRNAQLTGHILTVE
DPVEYQFKNKKSIVNQREIGSDTQSLQTALKNALRQAPDVILIGEIRDRETMSAAIAYAQSGHLCLATLHGNNSYHALNR
ILSFYPVEVRPTMLGDLASALKAIVSQRLVRSPTGERLPAVEVLLNTKLVGEMIEQGNFSGVREAMEKSMAEGSQTFEHD
LARLVVEGRIDRKEGLAYADSPTNLMWRLQNDFSIAAKAARDRKDAGAQDDEDQPSFTEIVLDVKPQ

Sequences:

>Translated_387_residues
MSTMERILRLMAEKRASDVYLSANAPVLIKINGECVPVNSQLLPFDAPKNLLAEIVPPDRIEELEETGELNMGVPLTGVG
RFRVSAMRQRGSYAVVVRFIAQHIPELPSLNLPPILGELILEKRGLLLVVGATGSGKSTTLASMIDSRNAQLTGHILTVE
DPVEYQFKNKKSIVNQREIGSDTQSLQTALKNALRQAPDVILIGEIRDRETMSAAIAYAQSGHLCLATLHGNNSYHALNR
ILSFYPVEVRPTMLGDLASALKAIVSQRLVRSPTGERLPAVEVLLNTKLVGEMIEQGNFSGVREAMEKSMAEGSQTFEHD
LARLVVEGRIDRKEGLAYADSPTNLMWRLQNDFSIAAKAARDRKDAGAQDDEDQPSFTEIVLDVKPQ
>Mature_386_residues
STMERILRLMAEKRASDVYLSANAPVLIKINGECVPVNSQLLPFDAPKNLLAEIVPPDRIEELEETGELNMGVPLTGVGR
FRVSAMRQRGSYAVVVRFIAQHIPELPSLNLPPILGELILEKRGLLLVVGATGSGKSTTLASMIDSRNAQLTGHILTVED
PVEYQFKNKKSIVNQREIGSDTQSLQTALKNALRQAPDVILIGEIRDRETMSAAIAYAQSGHLCLATLHGNNSYHALNRI
LSFYPVEVRPTMLGDLASALKAIVSQRLVRSPTGERLPAVEVLLNTKLVGEMIEQGNFSGVREAMEKSMAEGSQTFEHDL
ARLVVEGRIDRKEGLAYADSPTNLMWRLQNDFSIAAKAARDRKDAGAQDDEDQPSFTEIVLDVKPQ

Specific function: Unknown

COG id: COG5008

COG function: function code NU; Tfp pilus assembly protein, ATPase PilU

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI87082188, Length=329, Percent_Identity=37.3860182370821, Blast_Score=218, Evalue=7e-58,
Organism=Escherichia coli, GI1786296, Length=282, Percent_Identity=33.6879432624113, Blast_Score=104, Evalue=8e-24,
Organism=Escherichia coli, GI1789723, Length=157, Percent_Identity=42.6751592356688, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR006321
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 42502; Mature: 42371

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS00662 T2SP_E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTMERILRLMAEKRASDVYLSANAPVLIKINGECVPVNSQLLPFDAPKNLLAEIVPPDR
CCHHHHHHHHHHHHCCCCEEEECCCCEEEEECCEEEECCCCCCCCCCCHHHHHHCCCCHH
IEELEETGELNMGVPLTGVGRFRVSAMRQRGSYAVVVRFIAQHIPELPSLNLPPILGELI
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH
LEKRGLLLVVGATGSGKSTTLASMIDSRNAQLTGHILTVEDPVEYQFKNKKSIVNQREIG
HCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCHHHCCHHHHHHHHHCC
SDTQSLQTALKNALRQAPDVILIGEIRDRETMSAAIAYAQSGHLCLATLHGNNSYHALNR
CHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHH
ILSFYPVEVRPTMLGDLASALKAIVSQRLVRSPTGERLPAVEVLLNTKLVGEMIEQGNFS
HHHHCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCH
GVREAMEKSMAEGSQTFEHDLARLVVEGRIDRKEGLAYADSPTNLMWRLQNDFSIAAKAA
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHCCEECCCCCCEEEEECCCHHHHHHHH
RDRKDAGAQDDEDQPSFTEIVLDVKPQ
HHHHHCCCCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure 
STMERILRLMAEKRASDVYLSANAPVLIKINGECVPVNSQLLPFDAPKNLLAEIVPPDR
CHHHHHHHHHHHHCCCCEEEECCCCEEEEECCEEEECCCCCCCCCCCHHHHHHCCCCHH
IEELEETGELNMGVPLTGVGRFRVSAMRQRGSYAVVVRFIAQHIPELPSLNLPPILGELI
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH
LEKRGLLLVVGATGSGKSTTLASMIDSRNAQLTGHILTVEDPVEYQFKNKKSIVNQREIG
HCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCHHHCCHHHHHHHHHCC
SDTQSLQTALKNALRQAPDVILIGEIRDRETMSAAIAYAQSGHLCLATLHGNNSYHALNR
CHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHH
ILSFYPVEVRPTMLGDLASALKAIVSQRLVRSPTGERLPAVEVLLNTKLVGEMIEQGNFS
HHHHCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCH
GVREAMEKSMAEGSQTFEHDLARLVVEGRIDRKEGLAYADSPTNLMWRLQNDFSIAAKAA
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHCCEECCCCCCEEEEECCCHHHHHHHH
RDRKDAGAQDDEDQPSFTEIVLDVKPQ
HHHHHCCCCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]