Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is yfcB [C]
Identifier: 120611152
GI number: 120611152
Start: 2714280
End: 2715209
Strand: Reverse
Name: yfcB [C]
Synonym: Aave_2481
Alternate gene names: 120611152
Gene position: 2715209-2714280 (Counterclockwise)
Preceding gene: 120611153
Following gene: 120611151
Centisome position: 50.73
GC content: 73.33
Gene sequence:
>930_bases ATGAGCACGACGCCCCACCCCGTCCCGCCCGCGGGCCCCGTTCGCGGCGATACCGTGCCGGAACTGGTCGCGAGCGCGGC CGCGCGCCTGGATGCAGCCGGCGTGGCCTTCGGACACGGCACCGCGAATGCGCACGACGAGGCCGCCTGGCTGGTGCTGT GGCGCCTGGGCCTGCCGCTGGACACGCCGCTGGAAGATGCCGCCAGCGTGGCGCCCGACCGGCAGGCGCAGGTCGCGGAG CTGATCGAACAGCGCATCGCCACCCGCAAGCCCGCGGCCTACCTGACGCGGGAGGCCTGGCTGCAGGGCGTGCCGTTCTA TGTCGATGAGCGCGCCATCGTCCCGCGCAGCTTCATCGCGGAACTGCTCGCGGACGGCAGCATCGACGGCTTCCTCGGGG AGCACACGCGCGACGTGCTCGACCTGTGCACCGGCAACGGCAGCCTCGCCGTGCTGGCGGCCATGGCCTACCCCGACGTG CGCGTGACCGGCGCGGACCTGTCTCCGGACGCCCTGGATGTCGCCCGCATCAACGTCGAGCGCCACGGCCTCGAAGGCCG CGTGGCGCTGGCCCTCTCGGACGGTCTCTCGGCCGTTCCCGGCCCGTGGGACCTGATCCTCTGCAACCCGCCCTACGTGA ACGCGGCCAGCATGGCCGCGCTTCCGCAGGAGTACCGCGCCGAACCGGAACTGGCACTGGCGGGCGGCGCAGACGGCATG GACTTCGTCCGCCGGCTGCTGGCGGATGCGCCGGCCGCGCTGCGCGAGGACGGCGTGCTCATCCTCGAGATCGGCAACGA GCGCGCGCATTTCGAGGCCGCCTTCCCGCACCTGCCGGCCTTCTGGCTGGAAACCAGCGCGGGCGAGGACCAGGTACTGC TGCTCACGCGCGAAGCGCTGGTGCTGGCCCCGCCGCCCTCCGCCGCCTGA
Upstream 100 bases:
>100_bases TCCACAAGATCGACGAGCACGTGGTGATCGCCGACGTGGAACCGCTCAAGAACATCTACCGCCGCACGCTGGAGCGGCTG AACGCACAGGCCGCCGCAGC
Downstream 100 bases:
>100_bases CCCATACCCTGCGTCGCCGGACTGCACGCCGCAGGCCGCGCGGGCGCATTCCGCCGCATCCGCTACCATGCGCGGTTGCT TTGTCGCGGGCCCCCCGGGC
Product: N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MSTTPHPVPPAGPVRGDTVPELVASAAARLDAAGVAFGHGTANAHDEAAWLVLWRLGLPLDTPLEDAASVAPDRQAQVAE LIEQRIATRKPAAYLTREAWLQGVPFYVDERAIVPRSFIAELLADGSIDGFLGEHTRDVLDLCTGNGSLAVLAAMAYPDV RVTGADLSPDALDVARINVERHGLEGRVALALSDGLSAVPGPWDLILCNPPYVNAASMAALPQEYRAEPELALAGGADGM DFVRRLLADAPAALREDGVLILEIGNERAHFEAAFPHLPAFWLETSAGEDQVLLLTREALVLAPPPSAA
Sequences:
>Translated_309_residues MSTTPHPVPPAGPVRGDTVPELVASAAARLDAAGVAFGHGTANAHDEAAWLVLWRLGLPLDTPLEDAASVAPDRQAQVAE LIEQRIATRKPAAYLTREAWLQGVPFYVDERAIVPRSFIAELLADGSIDGFLGEHTRDVLDLCTGNGSLAVLAAMAYPDV RVTGADLSPDALDVARINVERHGLEGRVALALSDGLSAVPGPWDLILCNPPYVNAASMAALPQEYRAEPELALAGGADGM DFVRRLLADAPAALREDGVLILEIGNERAHFEAAFPHLPAFWLETSAGEDQVLLLTREALVLAPPPSAA >Mature_308_residues STTPHPVPPAGPVRGDTVPELVASAAARLDAAGVAFGHGTANAHDEAAWLVLWRLGLPLDTPLEDAASVAPDRQAQVAEL IEQRIATRKPAAYLTREAWLQGVPFYVDERAIVPRSFIAELLADGSIDGFLGEHTRDVLDLCTGNGSLAVLAAMAYPDVR VTGADLSPDALDVARINVERHGLEGRVALALSDGLSAVPGPWDLILCNPPYVNAASMAALPQEYRAEPELALAGGADGMD FVRRLLADAPAALREDGVLILEIGNERAHFEAAFPHLPAFWLETSAGEDQVLLLTREALVLAPPPSAA
Specific function: Unknown
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=268, Percent_Identity=26.865671641791, Blast_Score=73, Evalue=3e-13, Organism=Escherichia coli, GI87082085, Length=289, Percent_Identity=44.636678200692, Blast_Score=241, Evalue=6e-65, Organism=Escherichia coli, GI1787463, Length=196, Percent_Identity=30.1020408163265, Blast_Score=72, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR017127 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 32624; Mature: 32493
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTPHPVPPAGPVRGDTVPELVASAAARLDAAGVAFGHGTANAHDEAAWLVLWRLGLPL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHEEEEEECCCCC DTPLEDAASVAPDRQAQVAELIEQRIATRKPAAYLTREAWLQGVPFYVDERAIVPRSFIA CCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHH ELLADGSIDGFLGEHTRDVLDLCTGNGSLAVLAAMAYPDVRVTGADLSPDALDVARINVE HHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCCCEEEEEEEHH RHGLEGRVALALSDGLSAVPGPWDLILCNPPYVNAASMAALPQEYRAEPELALAGGADGM HCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHCCHHHCCCCCEEEECCCCCH DFVRRLLADAPAALREDGVLILEIGNERAHFEAAFPHLPAFWLETSAGEDQVLLLTREAL HHHHHHHHCCCHHHHCCCEEEEEECCCCCEEEECCCCCCEEEEECCCCCCEEEEEEECEE VLAPPPSAA EECCCCCCC >Mature Secondary Structure STTPHPVPPAGPVRGDTVPELVASAAARLDAAGVAFGHGTANAHDEAAWLVLWRLGLPL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHEEEEEECCCCC DTPLEDAASVAPDRQAQVAELIEQRIATRKPAAYLTREAWLQGVPFYVDERAIVPRSFIA CCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHH ELLADGSIDGFLGEHTRDVLDLCTGNGSLAVLAAMAYPDVRVTGADLSPDALDVARINVE HHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCCCEEEEEEEHH RHGLEGRVALALSDGLSAVPGPWDLILCNPPYVNAASMAALPQEYRAEPELALAGGADGM HCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHCCHHHCCCCCEEEECCCCCH DFVRRLLADAPAALREDGVLILEIGNERAHFEAAFPHLPAFWLETSAGEDQVLLLTREAL HHHHHHHHCCCHHHHCCCEEEEEECCCCCEEEECCCCCCEEEEECCCCCCEEEEEEECEE VLAPPPSAA EECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]