Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is aspC [H]

Identifier: 120611111

GI number: 120611111

Start: 2663673

End: 2664869

Strand: Reverse

Name: aspC [H]

Synonym: Aave_2440

Alternate gene names: 120611111

Gene position: 2664869-2663673 (Counterclockwise)

Preceding gene: 120611126

Following gene: 120611110

Centisome position: 49.78

GC content: 65.16

Gene sequence:

>1197_bases
ATGTCTCTCTTCACCGCCGTCGAAATGGCACCGCGCGACCCGATCCTGGGTCTGAACGAGCAGTACGCTGCCGACACCAA
CCCCAACAAGGTCAACCTGGGGGTGGGCGTGTATTTCGACGACAACGGCAAGCTGCCCCTGCTCCAATGCGTCCAGGCCG
CGGAAAAGGCCATGATGGACAAGCCTTCGGCACGCGGCTACCTGCCCATCGACGGCATCGTCGCCTATGACAACGCCGTC
AAGTCGCTGGTGTTCGGCGAAGGCAGCGAGCCCGTCACCTCCGGCCGCGTTGCGACCGTGCAGGCCATCGGCGGCACGGG
CGGCCTGAAGATCGGCGCCGATTTCCTGAAGAAGGTCAGCCCCGACGCCAAGGTGCTGATTTCCGATCCGAGCTGGGAGA
ACCACCGCGCGCTGTTCACCAACGCCGGCTTCGTGGTCGATACCTACACCTACTACGACGCGGCCAAGCGCGGCGTGAAC
TTCGAAGGCATGCTGGCCAGCCTCAAGGCCGCCGCGCCCGGCACCATCGTCGTGCTGCACGCCTGCTGCCACAACCCCAC
CGGCTACGACATCACCTCCGAGCAGTGGGACCAGGTGGTGGCCGTGGTCAAGGCCCAGGGCCTGACGGCCTTCCTCGACA
TGGCCTACCAGGGCTTCGGCCACGGCATCCAGGAAGACGGTGCGGTGATCCAGAAGTTCGTCGCCGCCGGCCTGAGCTTC
TTCGTTTCCACCTCTTTCTCCAAGAGCTTCAGCCTGTATGGCGAGCGCGTGGGCGGCCTGTCCGTGCTGTGCGCCGACAA
GGAAGAAGCCTCCCGCGTGCTGAGCCAGCTGAAGATCGTGATCCGCACCAACTACTCCAATCCGCCCACGCATGGCGGCG
CGGTGGTGGCCGCGGTGCTGGGCAACCCCGAGCTGCGCGCCCTGTGGGAGAAGGAACTGGGCGAGATGCGCGTGCGCATC
AAGGCCATGCGCCAGAAGCTGGTGGACGGCCTCAAGGCCGCCGGCGTGCAGCAGGACATGTCCTTCATCACGCAGCAGAT
CGGCATGTTCAGCTACTCGGGCCTGTCCAAGGACCAGATGGTGCGCCTGCGCACCGAGTTCGGCGTGTACGGCACCGACA
CCGGCCGCATGTGCGTGGCCGCGCTCAACAGCAAGAACATCGACTACGTCTGCCAGTCGATCGCCAAGGTGATCTGA

Upstream 100 bases:

>100_bases
TGGCTCAGGGTGGAGCCCTTAAAATCGGGGCGACCTGGCAGAGTACAACAGGCCGGGTCTCCCGTTCCGACATCCTTCGT
CGATACCCCAAGGAAACTCC

Downstream 100 bases:

>100_bases
CCCCGCCCGCGGGCGCCAGCATGGGCAGGAAGCCGCCTCCGGGCGGCTTTTTCATGGGCGCACGGCGCGGCATGCCTCCC
TGCCCTGTCCGGGCGATACT

Product: aromatic amino acid aminotransferase

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MSLFTAVEMAPRDPILGLNEQYAADTNPNKVNLGVGVYFDDNGKLPLLQCVQAAEKAMMDKPSARGYLPIDGIVAYDNAV
KSLVFGEGSEPVTSGRVATVQAIGGTGGLKIGADFLKKVSPDAKVLISDPSWENHRALFTNAGFVVDTYTYYDAAKRGVN
FEGMLASLKAAAPGTIVVLHACCHNPTGYDITSEQWDQVVAVVKAQGLTAFLDMAYQGFGHGIQEDGAVIQKFVAAGLSF
FVSTSFSKSFSLYGERVGGLSVLCADKEEASRVLSQLKIVIRTNYSNPPTHGGAVVAAVLGNPELRALWEKELGEMRVRI
KAMRQKLVDGLKAAGVQQDMSFITQQIGMFSYSGLSKDQMVRLRTEFGVYGTDTGRMCVAALNSKNIDYVCQSIAKVI

Sequences:

>Translated_398_residues
MSLFTAVEMAPRDPILGLNEQYAADTNPNKVNLGVGVYFDDNGKLPLLQCVQAAEKAMMDKPSARGYLPIDGIVAYDNAV
KSLVFGEGSEPVTSGRVATVQAIGGTGGLKIGADFLKKVSPDAKVLISDPSWENHRALFTNAGFVVDTYTYYDAAKRGVN
FEGMLASLKAAAPGTIVVLHACCHNPTGYDITSEQWDQVVAVVKAQGLTAFLDMAYQGFGHGIQEDGAVIQKFVAAGLSF
FVSTSFSKSFSLYGERVGGLSVLCADKEEASRVLSQLKIVIRTNYSNPPTHGGAVVAAVLGNPELRALWEKELGEMRVRI
KAMRQKLVDGLKAAGVQQDMSFITQQIGMFSYSGLSKDQMVRLRTEFGVYGTDTGRMCVAALNSKNIDYVCQSIAKVI
>Mature_397_residues
SLFTAVEMAPRDPILGLNEQYAADTNPNKVNLGVGVYFDDNGKLPLLQCVQAAEKAMMDKPSARGYLPIDGIVAYDNAVK
SLVFGEGSEPVTSGRVATVQAIGGTGGLKIGADFLKKVSPDAKVLISDPSWENHRALFTNAGFVVDTYTYYDAAKRGVNF
EGMLASLKAAAPGTIVVLHACCHNPTGYDITSEQWDQVVAVVKAQGLTAFLDMAYQGFGHGIQEDGAVIQKFVAAGLSFF
VSTSFSKSFSLYGERVGGLSVLCADKEEASRVLSQLKIVIRTNYSNPPTHGGAVVAAVLGNPELRALWEKELGEMRVRIK
AMRQKLVDGLKAAGVQQDMSFITQQIGMFSYSGLSKDQMVRLRTEFGVYGTDTGRMCVAALNSKNIDYVCQSIAKVI

Specific function: Biosynthesis of Phe, Tyr, Asp and Leu. [C]

COG id: COG1448

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI73486658, Length=396, Percent_Identity=43.9393939393939, Blast_Score=347, Evalue=1e-95,
Organism=Homo sapiens, GI4504067, Length=405, Percent_Identity=41.2345679012346, Blast_Score=313, Evalue=3e-85,
Organism=Homo sapiens, GI117414139, Length=402, Percent_Identity=28.3582089552239, Blast_Score=179, Evalue=3e-45,
Organism=Escherichia coli, GI1790488, Length=397, Percent_Identity=50.3778337531486, Blast_Score=411, Evalue=1e-116,
Organism=Escherichia coli, GI1787159, Length=396, Percent_Identity=44.9494949494949, Blast_Score=390, Evalue=1e-109,
Organism=Caenorhabditis elegans, GI71981858, Length=398, Percent_Identity=41.2060301507538, Blast_Score=347, Evalue=5e-96,
Organism=Caenorhabditis elegans, GI25147133, Length=397, Percent_Identity=40.3022670025189, Blast_Score=317, Evalue=1e-86,
Organism=Caenorhabditis elegans, GI17569539, Length=401, Percent_Identity=38.4039900249377, Blast_Score=286, Evalue=1e-77,
Organism=Caenorhabditis elegans, GI17569537, Length=398, Percent_Identity=31.9095477386935, Blast_Score=195, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI25147136, Length=213, Percent_Identity=39.4366197183099, Blast_Score=171, Evalue=8e-43,
Organism=Caenorhabditis elegans, GI17550384, Length=268, Percent_Identity=33.2089552238806, Blast_Score=168, Evalue=4e-42,
Organism=Saccharomyces cerevisiae, GI6323055, Length=406, Percent_Identity=38.423645320197, Blast_Score=292, Evalue=7e-80,
Organism=Saccharomyces cerevisiae, GI6322743, Length=435, Percent_Identity=33.3333333333333, Blast_Score=231, Evalue=1e-61,
Organism=Drosophila melanogaster, GI24580972, Length=398, Percent_Identity=44.2211055276382, Blast_Score=347, Evalue=8e-96,
Organism=Drosophila melanogaster, GI24580970, Length=398, Percent_Identity=44.2211055276382, Blast_Score=347, Evalue=1e-95,
Organism=Drosophila melanogaster, GI19920542, Length=391, Percent_Identity=44.5012787723785, Blast_Score=341, Evalue=5e-94,
Organism=Drosophila melanogaster, GI24654046, Length=401, Percent_Identity=39.4014962593516, Blast_Score=306, Evalue=2e-83,
Organism=Drosophila melanogaster, GI19922362, Length=401, Percent_Identity=39.4014962593516, Blast_Score=305, Evalue=3e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR000796
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 42769; Mature: 42638

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFTAVEMAPRDPILGLNEQYAADTNPNKVNLGVGVYFDDNGKLPLLQCVQAAEKAMMD
CCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHC
KPSARGYLPIDGIVAYDNAVKSLVFGEGSEPVTSGRVATVQAIGGTGGLKIGADFLKKVS
CCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCEECHHHHHHCC
PDAKVLISDPSWENHRALFTNAGFVVDTYTYYDAAKRGVNFEGMLASLKAAAPGTIVVLH
CCCEEEEECCCCCCCEEEEECCCEEEEEHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEE
ACCHNPTGYDITSEQWDQVVAVVKAQGLTAFLDMAYQGFGHGIQEDGAVIQKFVAAGLSF
EHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
FVSTSFSKSFSLYGERVGGLSVLCADKEEASRVLSQLKIVIRTNYSNPPTHGGAVVAAVL
HHHHCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHEEEEEECCCCCCCCCCEEEEEEE
GNPELRALWEKELGEMRVRIKAMRQKLVDGLKAAGVQQDMSFITQQIGMFSYSGLSKDQM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHH
VRLRTEFGVYGTDTGRMCVAALNSKNIDYVCQSIAKVI
EEEEHHCCCEECCCCCEEEEEECCCCHHHHHHHHHHHC
>Mature Secondary Structure 
SLFTAVEMAPRDPILGLNEQYAADTNPNKVNLGVGVYFDDNGKLPLLQCVQAAEKAMMD
CCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHC
KPSARGYLPIDGIVAYDNAVKSLVFGEGSEPVTSGRVATVQAIGGTGGLKIGADFLKKVS
CCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCEECHHHHHHCC
PDAKVLISDPSWENHRALFTNAGFVVDTYTYYDAAKRGVNFEGMLASLKAAAPGTIVVLH
CCCEEEEECCCCCCCEEEEECCCEEEEEHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEE
ACCHNPTGYDITSEQWDQVVAVVKAQGLTAFLDMAYQGFGHGIQEDGAVIQKFVAAGLSF
EHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
FVSTSFSKSFSLYGERVGGLSVLCADKEEASRVLSQLKIVIRTNYSNPPTHGGAVVAAVL
HHHHCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHEEEEEECCCCCCCCCCEEEEEEE
GNPELRALWEKELGEMRVRIKAMRQKLVDGLKAAGVQQDMSFITQQIGMFSYSGLSKDQM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHH
VRLRTEFGVYGTDTGRMCVAALNSKNIDYVCQSIAKVI
EEEEHHCCCEECCCCCEEEEEECCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043; 8808952 [H]