Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is yvyE [H]
Identifier: 120611105
GI number: 120611105
Start: 2656135
End: 2656755
Strand: Reverse
Name: yvyE [H]
Synonym: Aave_2434
Alternate gene names: 120611105
Gene position: 2656755-2656135 (Counterclockwise)
Preceding gene: 120611107
Following gene: 120611104
Centisome position: 49.63
GC content: 72.14
Gene sequence:
>621_bases GTGCTCCGGCGGCGGCCTACACTTGCGCCCCCTATGCCGCACACACTTCGAGAGCCTTCGCACAGCGAACTCATCATCAA GAAGAGCCGCTTCATCGGCTGCGTGCAACCCGTTGCCGACCGGGGAGCCGCCCAACAGGTGGTGGACGGCTTGCGGCGCG ACCATCCCGGCGCAGCCCATGTCTGCTGGGCCCTTCTGGCCGGCGGCCAGTCGGCGGCGGTGGACGATGGGGAGCCCGGC GGCACGGCGGGCCGGCCCATGCTGGAGGTATTGCGCCACCAGGACCTGGAAGGCGTTCTCGCCACCGTGGTGCGCTACTT CGGCGGGGTGAAGCTCGGCGCTGGAGGACTCGTGCGGGCGTACGCGGACACGGTGGCCCAGGCCCTGCTCCTGGCGGACA AGGTGCCCCTGGAGCGCATGACCATGCTGCAGTGCCTGGTGCCTTACGCGCTGGAAGGGCTCGTGCGCCGCGAGGTGGAG GCCGCCGGGGCCAGGCTGCAGGACGTGGAGCACGGATCGCTGGTCCTGCTGCGCCTGACGATTCCCGCGTCGCGCGCCGG GACGTTCCGGCAGCGCATCGACGACGCCGCCCAGGGGCGGGCCGGCTGGCCCGCCGCCTGA
Upstream 100 bases:
>100_bases GGTTTCTCCTTCGGTCAGTGCCGCGGATGCGGCGATGGCCTATCGTAGGAAAGGCGGCCAGGGAAGCCATTGACGTGCAT CAATCCCCGGGGGATGCCCC
Downstream 100 bases:
>100_bases AGGTGTGCGCGGCCCGGCGGCGAGGCAAGACAGCCTTTCCGCCTACATGCCGCCATGCATGCGGGCGCAGACACTTTCCT GCCGAGCCACACACCTGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MLRRRPTLAPPMPHTLREPSHSELIIKKSRFIGCVQPVADRGAAQQVVDGLRRDHPGAAHVCWALLAGGQSAAVDDGEPG GTAGRPMLEVLRHQDLEGVLATVVRYFGGVKLGAGGLVRAYADTVAQALLLADKVPLERMTMLQCLVPYALEGLVRREVE AAGARLQDVEHGSLVLLRLTIPASRAGTFRQRIDDAAQGRAGWPAA
Sequences:
>Translated_206_residues MLRRRPTLAPPMPHTLREPSHSELIIKKSRFIGCVQPVADRGAAQQVVDGLRRDHPGAAHVCWALLAGGQSAAVDDGEPG GTAGRPMLEVLRHQDLEGVLATVVRYFGGVKLGAGGLVRAYADTVAQALLLADKVPLERMTMLQCLVPYALEGLVRREVE AAGARLQDVEHGSLVLLRLTIPASRAGTFRQRIDDAAQGRAGWPAA >Mature_206_residues MLRRRPTLAPPMPHTLREPSHSELIIKKSRFIGCVQPVADRGAAQQVVDGLRRDHPGAAHVCWALLAGGQSAAVDDGEPG GTAGRPMLEVLRHQDLEGVLATVVRYFGGVKLGAGGLVRAYADTVAQALLLADKVPLERMTMLQCLVPYALEGLVRREVE AAGARLQDVEHGSLVLLRLTIPASRAGTFRQRIDDAAQGRAGWPAA
Specific function: Unknown
COG id: COG1739
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPACT family [H]
Homologues:
Organism=Escherichia coli, GI87082338, Length=200, Percent_Identity=38, Blast_Score=88, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR020568 - InterPro: IPR000640 - InterPro: IPR015796 - InterPro: IPR015269 - InterPro: IPR020569 - InterPro: IPR001498 [H]
Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]
EC number: NA
Molecular weight: Translated: 22043; Mature: 22043
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRRRPTLAPPMPHTLREPSHSELIIKKSRFIGCVQPVADRGAAQQVVDGLRRDHPGAAH CCCCCCCCCCCCCHHHCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHH VCWALLAGGQSAAVDDGEPGGTAGRPMLEVLRHQDLEGVLATVVRYFGGVKLGAGGLVRA HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCEEECCCHHHHH YADTVAQALLLADKVPLERMTMLQCLVPYALEGLVRREVEAAGARLQDVEHGSLVLLRLT HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEEE IPASRAGTFRQRIDDAAQGRAGWPAA CCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLRRRPTLAPPMPHTLREPSHSELIIKKSRFIGCVQPVADRGAAQQVVDGLRRDHPGAAH CCCCCCCCCCCCCHHHCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHH VCWALLAGGQSAAVDDGEPGGTAGRPMLEVLRHQDLEGVLATVVRYFGGVKLGAGGLVRA HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCEEECCCHHHHH YADTVAQALLLADKVPLERMTMLQCLVPYALEGLVRREVEAAGARLQDVEHGSLVLLRLT HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEEE IPASRAGTFRQRIDDAAQGRAGWPAA CCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 3141378; 8313894 [H]