Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611046
Identifier: 120611046
GI number: 120611046
Start: 2591400
End: 2593331
Strand: Direct
Name: 120611046
Synonym: Aave_2375
Alternate gene names: NA
Gene position: 2591400-2593331 (Clockwise)
Preceding gene: 120611045
Following gene: 120611047
Centisome position: 48.41
GC content: 68.94
Gene sequence:
>1932_bases ATGACAAACAGCCGCAAGATCGACACGGGTGTGGCCCGGCTGCCGGCCCTGCCGCGCCTCAATGCCCAGGACAAGGCCCT CACCGACTGGGCCAAGGCGGTGACGGAGCACCTGGAGGTGCGCGCCGGCTCGCGCGGCAACGAATTCGAGCGCGGCGTGA CGGTGCGCGAGCTGCGCGAGGCCATGGGAGGCGTGCAGGGGTTAGTGCAGATCCTCGAGCAGGACCGCAAGCCCGGGCCG GGGGAAACGTTGATCGACCTGGGCGGGGGGCTGTCGGCCACGGTGCAGATCGACCGCTTCGCCCAGGCCATCATCGACTC GGCCCTGTTCCGCTCGCTCGCGAAGACGCTGGACGATCCCACGCGGTTCGACCACCTGGCGAAGGAGATCCGGGACGAGC TGGTGCGCTCGATTGCCGACGAGGCCGCCAAGCGCGGCGCGGAGGTGCGCGACCTGCAGACCATCGTGCAGACGAACGAA CGCAGTTTCGCGCGCCAGGTGCGGGAGGTGACTGCCAGCCTGCAGCAGGCCAGCGCCGGCATCCGCGCCACGCAGGCGGC CTGGAGCGACGGGCAGCGCGCCATGGCCACCAACGTGCTGCAGCTGCAGGCCTCGCTCGGGCGCTACTACCGCGACGGCA CGCCCGGGCGCGCGAGCCTGGAGCAGGAGATGACCGTGCTGGCCAGCTACTCGGACGGGCTGCGCGCGCAGTACACGCTC AAGGTGCAGGCCGGCGGCGCGCTGGCCGGCTTCGGGATCGCCGCCGAGGAGCGCAACGGCCAGACCACCAGCGCCTTCAT CATCATGGCCGACAAGTTCGCTGTGGTGGCGCCGAACTACAGCGGGGGGCTGCTGCGCACGCCGCGGCCGCAGGACGTGG TGTTCGGCGTGGACGGCAATGGGATCTACCTGCAGAACAACGTCTATGTGAAGGGCAACCTGCGCGTGGATGGGCAGGGC CGTACGCTCGCCGACGGCATGCGGGGCTCGGTGTTGCTGTCCGCGAGCGGCAGCTACTGGAGCGACGCCACGGCCCGGCA GGCTGTCTGGCAGGCCTTGGGCAACGGCGGCAGCGCACCCAACAACAACCACCTGCAGGTGGGCGATGCCGTCACCATCA CCGACGGCGGCGCGTTCACCCAGACCAGGCACTGGATGGGGTATTACTGGGCCATTCCCGGTGCGGTGTTGAGCGGCGAC CTACTGGTGGACGGTACGGTGGCGGCGCGCAAGGTGGACACGCGGGGGCTCACGGTGCGCGACAGCGCCGGCAACATCAT CCTGTCGGCCAACGGCATGGACGCCCAGTGGTTGCGCAACCTGCAGGCTGCCCAGGTCGGCGGGCTCGGCACGTTGGCGC GGCGCGACGCGGCGCGGATCGGGGAAACGGTGACCTTCCCCGATGGCTCGGTGATGGGCACCTCCGACTTCATCAACCGC CTGCAGCGCATCACCAGCAACAACATCGGCGTCTTCATGGACACCGCCGCGATCGGCACAGCCTACATCGGCAACGCCGC GATCGGCACGCTGCAGGTGCAGGGCGGGGCCGTGACGGCCATGTCGTTCGGAGAGTCAGGCAGTTTCGTGGTGCCGGGCG GTGGCAGCTCTGGTGGGGCGGGGATCTACCTCGCCATGCCGGCGAACTCGTCGGGCGTCACGTTGTCGGCCTACGCCGAG GTGAATCCCCTGGGAGGCGATGCCAGCGTGGTGGTGTACCTGCGCCGTAACGGCGCCCGAATCACGCACGCAGCCACGTC CATGCGCGGGGGGTGGACATCGCAGATTTTCGTGGTGGGCTTCGACGCGCCATGGTGGGATGGCACCCACTTCTACGACA TCGAGGTGGTGAGCCCGAACTACGGGCCCGGTGCAAATCAACAATTGACCGTGGCACGCACCACCATTACCGCCACAGGA GGAAAGCGATGA
Upstream 100 bases:
>100_bases TGCCGACCGGGCGCTGGCTTGAGCACCAGGTAGAAATCCAGAGCGCCGCACGCGTCACGTCCGTGGTGCTGTGCTCCACC TCCGAGGAACTGCGCGGGTT
Downstream 100 bases:
>100_bases ACCAGCGCCGCTGCGCCGAGCTGCGGGATGTACCGGGCTGCCCGGACCTTGCGACCATCTTTCGCATTGCCGACGTGCCG GTGGGCATGGGAGCGCCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 643; Mature: 642
Protein sequence:
>643_residues MTNSRKIDTGVARLPALPRLNAQDKALTDWAKAVTEHLEVRAGSRGNEFERGVTVRELREAMGGVQGLVQILEQDRKPGP GETLIDLGGGLSATVQIDRFAQAIIDSALFRSLAKTLDDPTRFDHLAKEIRDELVRSIADEAAKRGAEVRDLQTIVQTNE RSFARQVREVTASLQQASAGIRATQAAWSDGQRAMATNVLQLQASLGRYYRDGTPGRASLEQEMTVLASYSDGLRAQYTL KVQAGGALAGFGIAAEERNGQTTSAFIIMADKFAVVAPNYSGGLLRTPRPQDVVFGVDGNGIYLQNNVYVKGNLRVDGQG RTLADGMRGSVLLSASGSYWSDATARQAVWQALGNGGSAPNNNHLQVGDAVTITDGGAFTQTRHWMGYYWAIPGAVLSGD LLVDGTVAARKVDTRGLTVRDSAGNIILSANGMDAQWLRNLQAAQVGGLGTLARRDAARIGETVTFPDGSVMGTSDFINR LQRITSNNIGVFMDTAAIGTAYIGNAAIGTLQVQGGAVTAMSFGESGSFVVPGGGSSGGAGIYLAMPANSSGVTLSAYAE VNPLGGDASVVVYLRRNGARITHAATSMRGGWTSQIFVVGFDAPWWDGTHFYDIEVVSPNYGPGANQQLTVARTTITATG GKR
Sequences:
>Translated_643_residues MTNSRKIDTGVARLPALPRLNAQDKALTDWAKAVTEHLEVRAGSRGNEFERGVTVRELREAMGGVQGLVQILEQDRKPGP GETLIDLGGGLSATVQIDRFAQAIIDSALFRSLAKTLDDPTRFDHLAKEIRDELVRSIADEAAKRGAEVRDLQTIVQTNE RSFARQVREVTASLQQASAGIRATQAAWSDGQRAMATNVLQLQASLGRYYRDGTPGRASLEQEMTVLASYSDGLRAQYTL KVQAGGALAGFGIAAEERNGQTTSAFIIMADKFAVVAPNYSGGLLRTPRPQDVVFGVDGNGIYLQNNVYVKGNLRVDGQG RTLADGMRGSVLLSASGSYWSDATARQAVWQALGNGGSAPNNNHLQVGDAVTITDGGAFTQTRHWMGYYWAIPGAVLSGD LLVDGTVAARKVDTRGLTVRDSAGNIILSANGMDAQWLRNLQAAQVGGLGTLARRDAARIGETVTFPDGSVMGTSDFINR LQRITSNNIGVFMDTAAIGTAYIGNAAIGTLQVQGGAVTAMSFGESGSFVVPGGGSSGGAGIYLAMPANSSGVTLSAYAE VNPLGGDASVVVYLRRNGARITHAATSMRGGWTSQIFVVGFDAPWWDGTHFYDIEVVSPNYGPGANQQLTVARTTITATG GKR >Mature_642_residues TNSRKIDTGVARLPALPRLNAQDKALTDWAKAVTEHLEVRAGSRGNEFERGVTVRELREAMGGVQGLVQILEQDRKPGPG ETLIDLGGGLSATVQIDRFAQAIIDSALFRSLAKTLDDPTRFDHLAKEIRDELVRSIADEAAKRGAEVRDLQTIVQTNER SFARQVREVTASLQQASAGIRATQAAWSDGQRAMATNVLQLQASLGRYYRDGTPGRASLEQEMTVLASYSDGLRAQYTLK VQAGGALAGFGIAAEERNGQTTSAFIIMADKFAVVAPNYSGGLLRTPRPQDVVFGVDGNGIYLQNNVYVKGNLRVDGQGR TLADGMRGSVLLSASGSYWSDATARQAVWQALGNGGSAPNNNHLQVGDAVTITDGGAFTQTRHWMGYYWAIPGAVLSGDL LVDGTVAARKVDTRGLTVRDSAGNIILSANGMDAQWLRNLQAAQVGGLGTLARRDAARIGETVTFPDGSVMGTSDFINRL QRITSNNIGVFMDTAAIGTAYIGNAAIGTLQVQGGAVTAMSFGESGSFVVPGGGSSGGAGIYLAMPANSSGVTLSAYAEV NPLGGDASVVVYLRRNGARITHAATSMRGGWTSQIFVVGFDAPWWDGTHFYDIEVVSPNYGPGANQQLTVARTTITATGG KR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67996; Mature: 67865
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNSRKIDTGVARLPALPRLNAQDKALTDWAKAVTEHLEVRAGSRGNEFERGVTVRELRE CCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHH AMGGVQGLVQILEQDRKPGPGETLIDLGGGLSATVQIDRFAQAIIDSALFRSLAKTLDDP HHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCH TRFDHLAKEIRDELVRSIADEAAKRGAEVRDLQTIVQTNERSFARQVREVTASLQQASAG HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC IRATQAAWSDGQRAMATNVLQLQASLGRYYRDGTPGRASLEQEMTVLASYSDGLRAQYTL CEEHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEECCCCCEEEEEE KVQAGGALAGFGIAAEERNGQTTSAFIIMADKFAVVAPNYSGGLLRTPRPQDVVFGVDGN EEECCCEEEECCEEECCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCCEEEEECCC GIYLQNNVYVKGNLRVDGQGRTLADGMRGSVLLSASGSYWSDATARQAVWQALGNGGSAP EEEEECEEEEEEEEEECCCCCCHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCC NNNHLQVGDAVTITDGGAFTQTRHWMGYYWAIPGAVLSGDLLVDGTVAARKVDTRGLTVR CCCEEEECCEEEEECCCCCCCCHHCEEEEEECCCHHEECCEEEECCHHEEEECCCCEEEE DSAGNIILSANGMDAQWLRNLQAAQVGGLGTLARRDAARIGETVTFPDGSVMGTSDFINR ECCCCEEEEECCCCHHHHHCCHHHHCCCCHHHHHHHHHHCCCEEECCCCCEECCHHHHHH LQRITSNNIGVFMDTAAIGTAYIGNAAIGTLQVQGGAVTAMSFGESGSFVVPGGGSSGGA HHHHHCCCCEEEEECHHHHHHEECCCEEEEEEECCCEEEEEEECCCCCEEECCCCCCCCC GIYLAMPANSSGVTLSAYAEVNPLGGDASVVVYLRRNGARITHAATSMRGGWTSQIFVVG EEEEEECCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCEEEEHHHHCCCCCCEEEEEEE FDAPWWDGTHFYDIEVVSPNYGPGANQQLTVARTTITATGGKR ECCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCC >Mature Secondary Structure TNSRKIDTGVARLPALPRLNAQDKALTDWAKAVTEHLEVRAGSRGNEFERGVTVRELRE CCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHH AMGGVQGLVQILEQDRKPGPGETLIDLGGGLSATVQIDRFAQAIIDSALFRSLAKTLDDP HHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCH TRFDHLAKEIRDELVRSIADEAAKRGAEVRDLQTIVQTNERSFARQVREVTASLQQASAG HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC IRATQAAWSDGQRAMATNVLQLQASLGRYYRDGTPGRASLEQEMTVLASYSDGLRAQYTL CEEHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEECCCCCEEEEEE KVQAGGALAGFGIAAEERNGQTTSAFIIMADKFAVVAPNYSGGLLRTPRPQDVVFGVDGN EEECCCEEEECCEEECCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCCEEEEECCC GIYLQNNVYVKGNLRVDGQGRTLADGMRGSVLLSASGSYWSDATARQAVWQALGNGGSAP EEEEECEEEEEEEEEECCCCCCHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCC NNNHLQVGDAVTITDGGAFTQTRHWMGYYWAIPGAVLSGDLLVDGTVAARKVDTRGLTVR CCCEEEECCEEEEECCCCCCCCHHCEEEEEECCCHHEECCEEEECCHHEEEECCCCEEEE DSAGNIILSANGMDAQWLRNLQAAQVGGLGTLARRDAARIGETVTFPDGSVMGTSDFINR ECCCCEEEEECCCCHHHHHCCHHHHCCCCHHHHHHHHHHCCCEEECCCCCEECCHHHHHH LQRITSNNIGVFMDTAAIGTAYIGNAAIGTLQVQGGAVTAMSFGESGSFVVPGGGSSGGA HHHHHCCCCEEEEECHHHHHHEECCCEEEEEEECCCEEEEEEECCCCCEEECCCCCCCCC GIYLAMPANSSGVTLSAYAEVNPLGGDASVVVYLRRNGARITHAATSMRGGWTSQIFVVG EEEEEECCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCEEEEHHHHCCCCCCEEEEEEE FDAPWWDGTHFYDIEVVSPNYGPGANQQLTVARTTITATGGKR ECCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA