Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611045
Identifier: 120611045
GI number: 120611045
Start: 2588827
End: 2591403
Strand: Direct
Name: 120611045
Synonym: Aave_2374
Alternate gene names: NA
Gene position: 2588827-2591403 (Clockwise)
Preceding gene: 120611044
Following gene: 120611046
Centisome position: 48.36
GC content: 69.31
Gene sequence:
>2577_bases ATGACCATCTACCGCCTGGCCGCGTTCGGCGGCGAAGCCCCCAGCGTTTCCGATCGCGCCCTGGGCAGTGACTTCGCGCG GGTGAACGAAAACCTCTTCCTGCCCAGCGGCGAGTTCTGGCCCATGGCCGCCGACCGCCGGCACTCGGCCTGCGTGTCCG GCGCGCGTACGCTGCACCGCATGGCGCGCAATGCGAACGGCGAGGTGGTCAAGGATCCAGCCGCGCCCATCCGCTCCTAT ACCGACGAGCGTTCATTCGTGAAGGGCCAGATCAACGACGAGGCCACGGAGCGAACCTACTGCACCACCGACGACGGCAG CGCTCGCCCGCGCGTGGTGGACGCCCGCGGGAATGACCGGCTGCTGGGCGTGCCGCGGCCAGTGAAGCCGATCGTGAAGC TGCAGGTGGTGGACGAGTTCACGCCCGAGGAGGCGAAAACCTGGCTCTATGGTGACTTCGCCCAGATGCTGCTGGACGAC CTGCTCGCCACGTTCGTGAAGCACGAGGGCAACCAGGAGGCCGTGCGATGGGACGCCTCGGGCAAGGCCTACGCCGGACC CACGTCGAACTACGGGCTCTCTCTATCCCCTGCCGTGGGCGGGGGCGCGGCGCCGGGCAACCTCTACGCCATCATCACCA CCGCGCGGGCGGCTGCCACCGAGATGGACATGACCCGACTGGGCGCCACCCAGACCAGCGGGGGCTGGGCCGTGCCGGTG GCCGCCATGCCGGCGAGCTACCCGCTGCGCCGCGCGGCGCTCGTGGAGGCGCTGCAGCTGCACGAATTCCCGGCCACCGC GGGCGAGCGCGCGGGCGAGACGGTGCTGACCGCCGACTTGGCCGCCAAGGTGGCCGACCTCGCCGAGAAGGCCGCCGCCC CAGGCGCCGAGTGCGCGGCCGCCCGCACCGAGCTGGACAAGCTGGTGAAGGAGTTCGCGACGCTCGCGCTGGAGAAGAGC TGGGCCGCGCCCACCTCCGCGCCCGTGCGGCCGAAGGAACCGTCTGTGCCGCAGTACCAGTCCACAGGCGGCGACAGCAC CGATATCGTGGAATCGGCAGCCTGGGTGCAGTACCGCAAGGACCTGGAGGCCTACTACCTTGCGCTGGAGGCCTACACCT CTGGCCGCGACGCGGCATCCACCCAGGCCGCGAGCCTGAATGCGCGGCTGGTGGAGATCCAGCAGCGGTGTACCACCCTG GTGGCGAGCATCCAGACCCAGCTGGCCAGCCAGTTCACTGCCCTGACCAAAGACGTGGCCGTAGTGGGCACCTGGGTGGA CAAGCTGGGCGGCGTGGCGAAGCTGGCCGGCGAAACGGTGGACCGCGTGGTTTCCTCGCGCTACTACGTGGTGGCCTTCG TGACCGACTGGGGTGAAGAGTCGGAGCCGTCGCCGCTCTCGGAGTTGCTGGAGGCGGATGCGAACGACACCGTGACCGTT CAACGGCCGGCCCTGATGACGGGGGAGAGCTATGCAGAGCGCTTCATCGCGAAGTGGCGGCTGTACCGCAGCAATACCAG CGACACGGCCGCCGCCTGGCAACTGGTGCAAGAGATGCCCATCACGGTGGCGGCCTTCCTGGACGACAAGGCGAGCGAGG AGCTGGAAAGCCTGCAGCCGCAGTTCACCTGGGCCGCGCCGCCGTACCGGATGGACGGGCAATTCGACGGCGAGCTGAAG CCCAGCGTGGGCGCGAACCCCTATCTGCGCGGGCTGGTGGGCATGCCCAACGGGATCATGGCCGGCTTCATCGACAACAC GGTGGCGTTCTGCGAACCCTACGTGCCCTATGCCTGGCCGGTGGAGTACCAGGTCACGACAGAATTCCCCGTGGTCGGCA TGGCCGTGTTCGACCAGACCCTGTTCGTGGGCACGGCCGGCAATCCATACTTCGTCACCGGTGCCCACTCGGCCTCGATG TCGGCCCAGAAGCTCGATAGCAACCAGGCGTGCGCCTCGCGGCGGTCGGTGGTGGGCGTGCAGGGCGGCGTGCTCTACGC CTCTCCGGACGGGCTCTGCCTGGCGAGTGCCCGCGGCGTGGAGGTGGTGTCCCGGCAGCTGATCGCGCGGAAGGACTGGC AGGCCATGCAGCCGGCCAGCATGTTCGCAGCCGAGCACGAGGGCGTTTACTACCTGTTCTACGCTGGCGCGGGCGGGGGC TGTCTTGCGTGCAACATGCAGGACGGGATGAAGCTGGGCCGCATCGACCTCTCGGGCTCGGCCGTGTGGGTGGACAAGCT CAACGACCTGATGTACCTGGCTCGGGGCTCCGACATCCTGGAGTGCTTCACGGGCGGGGCCGGCCGCGCGGGCCGGTGGC GCACGGGCATCGCCACGCAGCCGCGCCAGCAGCCGCTCGCGTGGGCGAAGGTGTACGGCCAGCAGGACGAAGCGCACCCC GTCACGCTGCGCCTGTGGGGCGACGGCGTGCTGCAGCACACGGCGACCTTCACGGACCTGCAGCCCCAGCGCCTGCCGAC CGGGCGCTGGCTTGAGCACCAGGTAGAAATCCAGAGCGCCGCACGCGTCACGTCCGTGGTGCTGTGCTCCACCTCCGAGG AACTGCGCGGGTTATGA
Upstream 100 bases:
>100_bases GCCATCGGGCTGACCCGACGGGAGCTGGACGACATCTTCACGCACGCGGCGGGGCTGTAGCACGCGCCGCGGCGGTGCCA AGCCTGCCAGATTCCGGGCC
Downstream 100 bases:
>100_bases CAAACAGCCGCAAGATCGACACGGGTGTGGCCCGGCTGCCGGCCCTGCCGCGCCTCAATGCCCAGGACAAGGCCCTCACC GACTGGGCCAAGGCGGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 858; Mature: 857
Protein sequence:
>858_residues MTIYRLAAFGGEAPSVSDRALGSDFARVNENLFLPSGEFWPMAADRRHSACVSGARTLHRMARNANGEVVKDPAAPIRSY TDERSFVKGQINDEATERTYCTTDDGSARPRVVDARGNDRLLGVPRPVKPIVKLQVVDEFTPEEAKTWLYGDFAQMLLDD LLATFVKHEGNQEAVRWDASGKAYAGPTSNYGLSLSPAVGGGAAPGNLYAIITTARAAATEMDMTRLGATQTSGGWAVPV AAMPASYPLRRAALVEALQLHEFPATAGERAGETVLTADLAAKVADLAEKAAAPGAECAAARTELDKLVKEFATLALEKS WAAPTSAPVRPKEPSVPQYQSTGGDSTDIVESAAWVQYRKDLEAYYLALEAYTSGRDAASTQAASLNARLVEIQQRCTTL VASIQTQLASQFTALTKDVAVVGTWVDKLGGVAKLAGETVDRVVSSRYYVVAFVTDWGEESEPSPLSELLEADANDTVTV QRPALMTGESYAERFIAKWRLYRSNTSDTAAAWQLVQEMPITVAAFLDDKASEELESLQPQFTWAAPPYRMDGQFDGELK PSVGANPYLRGLVGMPNGIMAGFIDNTVAFCEPYVPYAWPVEYQVTTEFPVVGMAVFDQTLFVGTAGNPYFVTGAHSASM SAQKLDSNQACASRRSVVGVQGGVLYASPDGLCLASARGVEVVSRQLIARKDWQAMQPASMFAAEHEGVYYLFYAGAGGG CLACNMQDGMKLGRIDLSGSAVWVDKLNDLMYLARGSDILECFTGGAGRAGRWRTGIATQPRQQPLAWAKVYGQQDEAHP VTLRLWGDGVLQHTATFTDLQPQRLPTGRWLEHQVEIQSAARVTSVVLCSTSEELRGL
Sequences:
>Translated_858_residues MTIYRLAAFGGEAPSVSDRALGSDFARVNENLFLPSGEFWPMAADRRHSACVSGARTLHRMARNANGEVVKDPAAPIRSY TDERSFVKGQINDEATERTYCTTDDGSARPRVVDARGNDRLLGVPRPVKPIVKLQVVDEFTPEEAKTWLYGDFAQMLLDD LLATFVKHEGNQEAVRWDASGKAYAGPTSNYGLSLSPAVGGGAAPGNLYAIITTARAAATEMDMTRLGATQTSGGWAVPV AAMPASYPLRRAALVEALQLHEFPATAGERAGETVLTADLAAKVADLAEKAAAPGAECAAARTELDKLVKEFATLALEKS WAAPTSAPVRPKEPSVPQYQSTGGDSTDIVESAAWVQYRKDLEAYYLALEAYTSGRDAASTQAASLNARLVEIQQRCTTL VASIQTQLASQFTALTKDVAVVGTWVDKLGGVAKLAGETVDRVVSSRYYVVAFVTDWGEESEPSPLSELLEADANDTVTV QRPALMTGESYAERFIAKWRLYRSNTSDTAAAWQLVQEMPITVAAFLDDKASEELESLQPQFTWAAPPYRMDGQFDGELK PSVGANPYLRGLVGMPNGIMAGFIDNTVAFCEPYVPYAWPVEYQVTTEFPVVGMAVFDQTLFVGTAGNPYFVTGAHSASM SAQKLDSNQACASRRSVVGVQGGVLYASPDGLCLASARGVEVVSRQLIARKDWQAMQPASMFAAEHEGVYYLFYAGAGGG CLACNMQDGMKLGRIDLSGSAVWVDKLNDLMYLARGSDILECFTGGAGRAGRWRTGIATQPRQQPLAWAKVYGQQDEAHP VTLRLWGDGVLQHTATFTDLQPQRLPTGRWLEHQVEIQSAARVTSVVLCSTSEELRGL >Mature_857_residues TIYRLAAFGGEAPSVSDRALGSDFARVNENLFLPSGEFWPMAADRRHSACVSGARTLHRMARNANGEVVKDPAAPIRSYT DERSFVKGQINDEATERTYCTTDDGSARPRVVDARGNDRLLGVPRPVKPIVKLQVVDEFTPEEAKTWLYGDFAQMLLDDL LATFVKHEGNQEAVRWDASGKAYAGPTSNYGLSLSPAVGGGAAPGNLYAIITTARAAATEMDMTRLGATQTSGGWAVPVA AMPASYPLRRAALVEALQLHEFPATAGERAGETVLTADLAAKVADLAEKAAAPGAECAAARTELDKLVKEFATLALEKSW AAPTSAPVRPKEPSVPQYQSTGGDSTDIVESAAWVQYRKDLEAYYLALEAYTSGRDAASTQAASLNARLVEIQQRCTTLV ASIQTQLASQFTALTKDVAVVGTWVDKLGGVAKLAGETVDRVVSSRYYVVAFVTDWGEESEPSPLSELLEADANDTVTVQ RPALMTGESYAERFIAKWRLYRSNTSDTAAAWQLVQEMPITVAAFLDDKASEELESLQPQFTWAAPPYRMDGQFDGELKP SVGANPYLRGLVGMPNGIMAGFIDNTVAFCEPYVPYAWPVEYQVTTEFPVVGMAVFDQTLFVGTAGNPYFVTGAHSASMS AQKLDSNQACASRRSVVGVQGGVLYASPDGLCLASARGVEVVSRQLIARKDWQAMQPASMFAAEHEGVYYLFYAGAGGGC LACNMQDGMKLGRIDLSGSAVWVDKLNDLMYLARGSDILECFTGGAGRAGRWRTGIATQPRQQPLAWAKVYGQQDEAHPV TLRLWGDGVLQHTATFTDLQPQRLPTGRWLEHQVEIQSAARVTSVVLCSTSEELRGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92527; Mature: 92396
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIYRLAAFGGEAPSVSDRALGSDFARVNENLFLPSGEFWPMAADRRHSACVSGARTLHR CEEEEEEECCCCCCCCCHHHHCCHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHH MARNANGEVVKDPAAPIRSYTDERSFVKGQINDEATERTYCTTDDGSARPRVVDARGNDR HHHCCCCCEEECCCHHHHHHCCCCHHEECCCCCCCCCCEEEECCCCCCCCEEEECCCCCE LLGVPRPVKPIVKLQVVDEFTPEEAKTWLYGDFAQMLLDDLLATFVKHEGNQEAVRWDAS EECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC GKAYAGPTSNYGLSLSPAVGGGAAPGNLYAIITTARAAATEMDMTRLGATQTSGGWAVPV CCEECCCCCCCCEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHCCCCCCCCEEEEH AAMPASYPLRRAALVEALQLHEFPATAGERAGETVLTADLAAKVADLAEKAAAPGAECAA EECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHH ARTELDKLVKEFATLALEKSWAAPTSAPVRPKEPSVPQYQSTGGDSTDIVESAAWVQYRK HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH DLEAYYLALEAYTSGRDAASTQAASLNARLVEIQQRCTTLVASIQTQLASQFTALTKDVA HHHHHEEEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVGTWVDKLGGVAKLAGETVDRVVSSRYYVVAFVTDWGEESEPSPLSELLEADANDTVTV HHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCEEEE QRPALMTGESYAERFIAKWRLYRSNTSDTAAAWQLVQEMPITVAAFLDDKASEELESLQP ECCCEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCC QFTWAAPPYRMDGQFDGELKPSVGANPYLRGLVGMPNGIMAGFIDNTVAFCEPYVPYAWP CEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHCHHHHHCCCCCCCCC VEYQVTTEFPVVGMAVFDQTLFVGTAGNPYFVTGAHSASMSAQKLDSNQACASRRSVVGV EEEEEECCCCEEEHHHHCCEEEEECCCCCEEEECCCCCCCHHHHCCCCHHHHHHCCEEEE QGGVLYASPDGLCLASARGVEVVSRQLIARKDWQAMQPASMFAAEHEGVYYLFYAGAGGG CCCEEEECCCCEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEEECCCCC CLACNMQDGMKLGRIDLSGSAVWVDKLNDLMYLARGSDILECFTGGAGRAGRWRTGIATQ EEEEEHHCCCEEEEEECCCCEEEEEHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCC PRQQPLAWAKVYGQQDEAHPVTLRLWGDGVLQHTATFTDLQPQRLPTGRWLEHQVEIQSA CCCCCCHHHHHHCCCCCCCCEEEEEECCCHHHHHCHHCCCCCCCCCCCCCHHHHHHHHHH ARVTSVVLCSTSEELRGL HHEEEEEEECCHHHHCCC >Mature Secondary Structure TIYRLAAFGGEAPSVSDRALGSDFARVNENLFLPSGEFWPMAADRRHSACVSGARTLHR EEEEEEECCCCCCCCCHHHHCCHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHH MARNANGEVVKDPAAPIRSYTDERSFVKGQINDEATERTYCTTDDGSARPRVVDARGNDR HHHCCCCCEEECCCHHHHHHCCCCHHEECCCCCCCCCCEEEECCCCCCCCEEEECCCCCE LLGVPRPVKPIVKLQVVDEFTPEEAKTWLYGDFAQMLLDDLLATFVKHEGNQEAVRWDAS EECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC GKAYAGPTSNYGLSLSPAVGGGAAPGNLYAIITTARAAATEMDMTRLGATQTSGGWAVPV CCEECCCCCCCCEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHCCCCCCCCEEEEH AAMPASYPLRRAALVEALQLHEFPATAGERAGETVLTADLAAKVADLAEKAAAPGAECAA EECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHH ARTELDKLVKEFATLALEKSWAAPTSAPVRPKEPSVPQYQSTGGDSTDIVESAAWVQYRK HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH DLEAYYLALEAYTSGRDAASTQAASLNARLVEIQQRCTTLVASIQTQLASQFTALTKDVA HHHHHEEEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVGTWVDKLGGVAKLAGETVDRVVSSRYYVVAFVTDWGEESEPSPLSELLEADANDTVTV HHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCEEEE QRPALMTGESYAERFIAKWRLYRSNTSDTAAAWQLVQEMPITVAAFLDDKASEELESLQP ECCCEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCC QFTWAAPPYRMDGQFDGELKPSVGANPYLRGLVGMPNGIMAGFIDNTVAFCEPYVPYAWP CEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHCHHHHHCCCCCCCCC VEYQVTTEFPVVGMAVFDQTLFVGTAGNPYFVTGAHSASMSAQKLDSNQACASRRSVVGV EEEEEECCCCEEEHHHHCCEEEEECCCCCEEEECCCCCCCHHHHCCCCHHHHHHCCEEEE QGGVLYASPDGLCLASARGVEVVSRQLIARKDWQAMQPASMFAAEHEGVYYLFYAGAGGG CCCEEEECCCCEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEEECCCCC CLACNMQDGMKLGRIDLSGSAVWVDKLNDLMYLARGSDILECFTGGAGRAGRWRTGIATQ EEEEEHHCCCEEEEEECCCCEEEEEHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCC PRQQPLAWAKVYGQQDEAHPVTLRLWGDGVLQHTATFTDLQPQRLPTGRWLEHQVEIQSA CCCCCCHHHHHHCCCCCCCCEEEEEECCCHHHHHCHHCCCCCCCCCCCCCHHHHHHHHHH ARVTSVVLCSTSEELRGL HHEEEEEEECCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA