Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120610998
Identifier: 120610998
GI number: 120610998
Start: 2555656
End: 2555865
Strand: Reverse
Name: 120610998
Synonym: Aave_2326
Alternate gene names: NA
Gene position: 2555865-2555656 (Counterclockwise)
Preceding gene: 120610999
Following gene: 120610997
Centisome position: 47.75
GC content: 60.0
Gene sequence:
>210_bases ATGGCGCGATTCATCCGAATCCCCAAGTTCTGCCTCGACACCGGCTACACCGACCGCGCAGTGGAAACCAAGATCCACCG CGGCGTGTGGGTCGAAGGCAAAGAGTACGTCCGGGCCCCGGACGGGAATGTTCTGATCGATATGGAGGGATACAACCGAT GGGCCGCAAAGCATCATCCGGAGGTGTTAGACCACGCGGCAACCGCATAG
Upstream 100 bases:
>100_bases CGCTTCATCGGCGCTGCCTCATCGCGGGGATTGACCATCAACCCACCCCGGCCGGGGCGGCGATCTTCGCCCCCAGGCCT GCTCCACCAGGAGGACCGTG
Downstream 100 bases:
>100_bases AGGTCCGCTTCACCTGGGAGGGCAAACAGGTTTCGCCCACGCTGGACCTGCGGCCCACGGCCGCCAACCTGAAGCACGCG GCGCGACTGCGCGCGACGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MARFIRIPKFCLDTGYTDRAVETKIHRGVWVEGKEYVRAPDGNVLIDMEGYNRWAAKHHPEVLDHAATA
Sequences:
>Translated_69_residues MARFIRIPKFCLDTGYTDRAVETKIHRGVWVEGKEYVRAPDGNVLIDMEGYNRWAAKHHPEVLDHAATA >Mature_68_residues ARFIRIPKFCLDTGYTDRAVETKIHRGVWVEGKEYVRAPDGNVLIDMEGYNRWAAKHHPEVLDHAATA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7924; Mature: 7793
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARFIRIPKFCLDTGYTDRAVETKIHRGVWVEGKEYVRAPDGNVLIDMEGYNRWAAKHHP CCCCCCCCHHHHCCCCCCCHHHHHHCCCEEECCCCEEECCCCCEEEEECCCCCCCCCCCC EVLDHAATA HHHHHCCCC >Mature Secondary Structure ARFIRIPKFCLDTGYTDRAVETKIHRGVWVEGKEYVRAPDGNVLIDMEGYNRWAAKHHP CCCCCCCHHHHCCCCCCCHHHHHHCCCEEECCCCEEECCCCCEEEEECCCCCCCCCCCC EVLDHAATA HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA