Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120610984

Identifier: 120610984

GI number: 120610984

Start: 2539920

End: 2540912

Strand: Direct

Name: 120610984

Synonym: Aave_2312

Alternate gene names: NA

Gene position: 2539920-2540912 (Clockwise)

Preceding gene: 120610981

Following gene: 120610985

Centisome position: 47.45

GC content: 69.08

Gene sequence:

>993_bases
ATGAACAAAACTTCTTGCCTGGCCCGGTGGGCTGCCGTGGCGCTCACCTGGGCCGTGGCCGGCGCCCCGGCCCTGGCGCA
GGACGCCGCGGGTTACCCCGGCACCCGTCCCATCCGCCTCGTGGTGTCCCAGCAGGCTGGCGGCAGCTCCGACACGGTGG
CCCGCCTGTGGGCCGAACACGCCGGCAAGGCGCTGGGCGCCAATATCGTCGTGGAGAACAAGCCCGGGGCGGGCGGCATC
ATCGCGGCGCAGCAGGTGCTCGGCCAGCCGGCGGACGGCTACACGCTGATGTTCGGCGGGGTGTCGCAAATGGTGCTCAA
CAAGTTCGTGTACAAGCCGCTGCCATACGATCCCGAGAAGGACTTCACCGGCGTGGGCATGCTCAGCACCGTGCCCTTCG
TACTGGTGGCCAACCCCGCCACGGGCTTCAAGTCGCTGGACGATCTCGTGAAGTACGCCAAGGCGCACCCGGGCGAGCTG
AACTTCTCGTCCTCCGGCCTGGGCAATTCGACGCAGCTGGCGGTGGAACTGCTGCAGAAGAAGCTCGGCATCTCGATGAC
GCACGTGCCTTTCAAGGGCGAGCCCGACGGGCTGATGGCGACCATCGGTGGCCAGACCCAGGTGATGGCCCCGGTGGCCG
GCACCGCGCTGCCGCACATCAAGAACCGCAAGGTGGTGCCGCTGGTGGTGCTGGCGCCTTCGCGCCTTGCCGAACTGCCT
GATGTGCCGGCCGCCAACGAGCTGGGCGTGAAGGACTTCGATACCATGGGCTGGAGCGGCATCGTCGCCAAGGCCGGCAC
GCCCCCCGCGATCATCGCGAAGTTGCACGAGGGCACGCGCGCCTTCCACGCCAGCACCGAGGTGCAGGCCAAGCTGCGCG
CCATGAACGCGATCCCCATGGCCGGCCCCGCCAGCCAGCTCATGGAGGTGGCGCGCCGCGACACCCAGGCCTGGGGTCCG
GCGCTCGACGCGCTGAACCTGAGCGGCAAGTGA

Upstream 100 bases:

>100_bases
GAATTCGCTGGTCCCGGGGCATGCACCTCCGAATAATCGCTCCAGGAAGGCCGGCATGGGCACGGCTGCACGCACCCTGT
TTCTTCGGAGATTGCATACC

Downstream 100 bases:

>100_bases
GGTCTGAGATGTCCCTGAACAAGCAAGCCATGGTGTCCTGCCCGCAGCCCGAAGCGGCCGAATCGGGCATCGAGATCCTG
CGCGCGGGCGGCAACGCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF5 [H]

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MNKTSCLARWAAVALTWAVAGAPALAQDAAGYPGTRPIRLVVSQQAGGSSDTVARLWAEHAGKALGANIVVENKPGAGGI
IAAQQVLGQPADGYTLMFGGVSQMVLNKFVYKPLPYDPEKDFTGVGMLSTVPFVLVANPATGFKSLDDLVKYAKAHPGEL
NFSSSGLGNSTQLAVELLQKKLGISMTHVPFKGEPDGLMATIGGQTQVMAPVAGTALPHIKNRKVVPLVVLAPSRLAELP
DVPAANELGVKDFDTMGWSGIVAKAGTPPAIIAKLHEGTRAFHASTEVQAKLRAMNAIPMAGPASQLMEVARRDTQAWGP
ALDALNLSGK

Sequences:

>Translated_330_residues
MNKTSCLARWAAVALTWAVAGAPALAQDAAGYPGTRPIRLVVSQQAGGSSDTVARLWAEHAGKALGANIVVENKPGAGGI
IAAQQVLGQPADGYTLMFGGVSQMVLNKFVYKPLPYDPEKDFTGVGMLSTVPFVLVANPATGFKSLDDLVKYAKAHPGEL
NFSSSGLGNSTQLAVELLQKKLGISMTHVPFKGEPDGLMATIGGQTQVMAPVAGTALPHIKNRKVVPLVVLAPSRLAELP
DVPAANELGVKDFDTMGWSGIVAKAGTPPAIIAKLHEGTRAFHASTEVQAKLRAMNAIPMAGPASQLMEVARRDTQAWGP
ALDALNLSGK
>Mature_330_residues
MNKTSCLARWAAVALTWAVAGAPALAQDAAGYPGTRPIRLVVSQQAGGSSDTVARLWAEHAGKALGANIVVENKPGAGGI
IAAQQVLGQPADGYTLMFGGVSQMVLNKFVYKPLPYDPEKDFTGVGMLSTVPFVLVANPATGFKSLDDLVKYAKAHPGEL
NFSSSGLGNSTQLAVELLQKKLGISMTHVPFKGEPDGLMATIGGQTQVMAPVAGTALPHIKNRKVVPLVVLAPSRLAELP
DVPAANELGVKDFDTMGWSGIVAKAGTPPAIIAKLHEGTRAFHASTEVQAKLRAMNAIPMAGPASQLMEVARRDTQAWGP
ALDALNLSGK

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34329; Mature: 34329

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTSCLARWAAVALTWAVAGAPALAQDAAGYPGTRPIRLVVSQQAGGSSDTVARLWAEH
CCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHH
AGKALGANIVVENKPGAGGIIAAQQVLGQPADGYTLMFGGVSQMVLNKFVYKPLPYDPEK
CCHHCCCEEEEECCCCCCCHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCC
DFTGVGMLSTVPFVLVANPATGFKSLDDLVKYAKAHPGELNFSSSGLGNSTQLAVELLQK
CCCCCCHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
KLGISMTHVPFKGEPDGLMATIGGQTQVMAPVAGTALPHIKNRKVVPLVVLAPSRLAELP
HHCCEEEECCCCCCCCCEEEEECCCEEEECCHHCCCCCCCCCCCEEEEEEECCHHHHHCC
DVPAANELGVKDFDTMGWSGIVAKAGTPPAIIAKLHEGTRAFHASTEVQAKLRAMNAIPM
CCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCHHHHHCCHHHHHHHHHHHCCCC
AGPASQLMEVARRDTQAWGPALDALNLSGK
CCCHHHHHHHHHHHHHHCCCHHHCCCCCCC
>Mature Secondary Structure
MNKTSCLARWAAVALTWAVAGAPALAQDAAGYPGTRPIRLVVSQQAGGSSDTVARLWAEH
CCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHH
AGKALGANIVVENKPGAGGIIAAQQVLGQPADGYTLMFGGVSQMVLNKFVYKPLPYDPEK
CCHHCCCEEEEECCCCCCCHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCC
DFTGVGMLSTVPFVLVANPATGFKSLDDLVKYAKAHPGELNFSSSGLGNSTQLAVELLQK
CCCCCCHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
KLGISMTHVPFKGEPDGLMATIGGQTQVMAPVAGTALPHIKNRKVVPLVVLAPSRLAELP
HHCCEEEECCCCCCCCCEEEEECCCEEEECCHHCCCCCCCCCCCEEEEEEECCHHHHHCC
DVPAANELGVKDFDTMGWSGIVAKAGTPPAIIAKLHEGTRAFHASTEVQAKLRAMNAIPM
CCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCHHHHHCCHHHHHHHHHHHCCCC
AGPASQLMEVARRDTQAWGPALDALNLSGK
CCCHHHHHHHHHHHHHHCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9583950; 12910271 [H]