Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610984
Identifier: 120610984
GI number: 120610984
Start: 2539920
End: 2540912
Strand: Direct
Name: 120610984
Synonym: Aave_2312
Alternate gene names: NA
Gene position: 2539920-2540912 (Clockwise)
Preceding gene: 120610981
Following gene: 120610985
Centisome position: 47.45
GC content: 69.08
Gene sequence:
>993_bases ATGAACAAAACTTCTTGCCTGGCCCGGTGGGCTGCCGTGGCGCTCACCTGGGCCGTGGCCGGCGCCCCGGCCCTGGCGCA GGACGCCGCGGGTTACCCCGGCACCCGTCCCATCCGCCTCGTGGTGTCCCAGCAGGCTGGCGGCAGCTCCGACACGGTGG CCCGCCTGTGGGCCGAACACGCCGGCAAGGCGCTGGGCGCCAATATCGTCGTGGAGAACAAGCCCGGGGCGGGCGGCATC ATCGCGGCGCAGCAGGTGCTCGGCCAGCCGGCGGACGGCTACACGCTGATGTTCGGCGGGGTGTCGCAAATGGTGCTCAA CAAGTTCGTGTACAAGCCGCTGCCATACGATCCCGAGAAGGACTTCACCGGCGTGGGCATGCTCAGCACCGTGCCCTTCG TACTGGTGGCCAACCCCGCCACGGGCTTCAAGTCGCTGGACGATCTCGTGAAGTACGCCAAGGCGCACCCGGGCGAGCTG AACTTCTCGTCCTCCGGCCTGGGCAATTCGACGCAGCTGGCGGTGGAACTGCTGCAGAAGAAGCTCGGCATCTCGATGAC GCACGTGCCTTTCAAGGGCGAGCCCGACGGGCTGATGGCGACCATCGGTGGCCAGACCCAGGTGATGGCCCCGGTGGCCG GCACCGCGCTGCCGCACATCAAGAACCGCAAGGTGGTGCCGCTGGTGGTGCTGGCGCCTTCGCGCCTTGCCGAACTGCCT GATGTGCCGGCCGCCAACGAGCTGGGCGTGAAGGACTTCGATACCATGGGCTGGAGCGGCATCGTCGCCAAGGCCGGCAC GCCCCCCGCGATCATCGCGAAGTTGCACGAGGGCACGCGCGCCTTCCACGCCAGCACCGAGGTGCAGGCCAAGCTGCGCG CCATGAACGCGATCCCCATGGCCGGCCCCGCCAGCCAGCTCATGGAGGTGGCGCGCCGCGACACCCAGGCCTGGGGTCCG GCGCTCGACGCGCTGAACCTGAGCGGCAAGTGA
Upstream 100 bases:
>100_bases GAATTCGCTGGTCCCGGGGCATGCACCTCCGAATAATCGCTCCAGGAAGGCCGGCATGGGCACGGCTGCACGCACCCTGT TTCTTCGGAGATTGCATACC
Downstream 100 bases:
>100_bases GGTCTGAGATGTCCCTGAACAAGCAAGCCATGGTGTCCTGCCCGCAGCCCGAAGCGGCCGAATCGGGCATCGAGATCCTG CGCGCGGGCGGCAACGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: ORF5 [H]
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MNKTSCLARWAAVALTWAVAGAPALAQDAAGYPGTRPIRLVVSQQAGGSSDTVARLWAEHAGKALGANIVVENKPGAGGI IAAQQVLGQPADGYTLMFGGVSQMVLNKFVYKPLPYDPEKDFTGVGMLSTVPFVLVANPATGFKSLDDLVKYAKAHPGEL NFSSSGLGNSTQLAVELLQKKLGISMTHVPFKGEPDGLMATIGGQTQVMAPVAGTALPHIKNRKVVPLVVLAPSRLAELP DVPAANELGVKDFDTMGWSGIVAKAGTPPAIIAKLHEGTRAFHASTEVQAKLRAMNAIPMAGPASQLMEVARRDTQAWGP ALDALNLSGK
Sequences:
>Translated_330_residues MNKTSCLARWAAVALTWAVAGAPALAQDAAGYPGTRPIRLVVSQQAGGSSDTVARLWAEHAGKALGANIVVENKPGAGGI IAAQQVLGQPADGYTLMFGGVSQMVLNKFVYKPLPYDPEKDFTGVGMLSTVPFVLVANPATGFKSLDDLVKYAKAHPGEL NFSSSGLGNSTQLAVELLQKKLGISMTHVPFKGEPDGLMATIGGQTQVMAPVAGTALPHIKNRKVVPLVVLAPSRLAELP DVPAANELGVKDFDTMGWSGIVAKAGTPPAIIAKLHEGTRAFHASTEVQAKLRAMNAIPMAGPASQLMEVARRDTQAWGP ALDALNLSGK >Mature_330_residues MNKTSCLARWAAVALTWAVAGAPALAQDAAGYPGTRPIRLVVSQQAGGSSDTVARLWAEHAGKALGANIVVENKPGAGGI IAAQQVLGQPADGYTLMFGGVSQMVLNKFVYKPLPYDPEKDFTGVGMLSTVPFVLVANPATGFKSLDDLVKYAKAHPGEL NFSSSGLGNSTQLAVELLQKKLGISMTHVPFKGEPDGLMATIGGQTQVMAPVAGTALPHIKNRKVVPLVVLAPSRLAELP DVPAANELGVKDFDTMGWSGIVAKAGTPPAIIAKLHEGTRAFHASTEVQAKLRAMNAIPMAGPASQLMEVARRDTQAWGP ALDALNLSGK
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34329; Mature: 34329
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTSCLARWAAVALTWAVAGAPALAQDAAGYPGTRPIRLVVSQQAGGSSDTVARLWAEH CCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHH AGKALGANIVVENKPGAGGIIAAQQVLGQPADGYTLMFGGVSQMVLNKFVYKPLPYDPEK CCHHCCCEEEEECCCCCCCHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCC DFTGVGMLSTVPFVLVANPATGFKSLDDLVKYAKAHPGELNFSSSGLGNSTQLAVELLQK CCCCCCHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH KLGISMTHVPFKGEPDGLMATIGGQTQVMAPVAGTALPHIKNRKVVPLVVLAPSRLAELP HHCCEEEECCCCCCCCCEEEEECCCEEEECCHHCCCCCCCCCCCEEEEEEECCHHHHHCC DVPAANELGVKDFDTMGWSGIVAKAGTPPAIIAKLHEGTRAFHASTEVQAKLRAMNAIPM CCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCHHHHHCCHHHHHHHHHHHCCCC AGPASQLMEVARRDTQAWGPALDALNLSGK CCCHHHHHHHHHHHHHHCCCHHHCCCCCCC >Mature Secondary Structure MNKTSCLARWAAVALTWAVAGAPALAQDAAGYPGTRPIRLVVSQQAGGSSDTVARLWAEH CCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHH AGKALGANIVVENKPGAGGIIAAQQVLGQPADGYTLMFGGVSQMVLNKFVYKPLPYDPEK CCHHCCCEEEEECCCCCCCHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCC DFTGVGMLSTVPFVLVANPATGFKSLDDLVKYAKAHPGELNFSSSGLGNSTQLAVELLQK CCCCCCHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH KLGISMTHVPFKGEPDGLMATIGGQTQVMAPVAGTALPHIKNRKVVPLVVLAPSRLAELP HHCCEEEECCCCCCCCCEEEEECCCEEEECCHHCCCCCCCCCCCEEEEEEECCHHHHHCC DVPAANELGVKDFDTMGWSGIVAKAGTPPAIIAKLHEGTRAFHASTEVQAKLRAMNAIPM CCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCHHHHHCCHHHHHHHHHHHCCCC AGPASQLMEVARRDTQAWGPALDALNLSGK CCCHHHHHHHHHHHHHHCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9583950; 12910271 [H]