Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610954
Identifier: 120610954
GI number: 120610954
Start: 2508846
End: 2509808
Strand: Direct
Name: 120610954
Synonym: Aave_2280
Alternate gene names: NA
Gene position: 2508846-2509808 (Clockwise)
Preceding gene: 120610950
Following gene: 120610963
Centisome position: 46.87
GC content: 69.89
Gene sequence:
>963_bases ATGACCACCACGACGACTTCCGCCCCCGCCATCGCGCGCACCCTGCTGCCCCAGACCCTGCTCATGGCCCCGTCGCCGGA CGACCCTTCCCCCCTGGTGCTCTACCACGGCCGCTGCGCCGACGGCTTCGGCGCCGCGCTGGCCGCCTGGCGCTACTACG GCGGCGAGGTCGAATGCGTGGGCCTGTCCCACGGCCAGGCGAAGTCCGTGGACGACCTGCCGCCCCTCGAAGGCCGGTAC GTGTACATCCTGGATTTCTCGTTCCCGCCCGATCTGCTGCGCGCCATCGACGAGCGCGCCGCCCGCCTCGTGATGCTGGA CCACCACAAGAGCGCCGCCGAACAGCTCACCGGCTTCGCCTGCCGCTGCGGCGTGGTCCATTTCGACATGGACAAGTCGG GCGCGCGCCTCGCCTGGGATTTCTTCCACGCGGAGACGCCGCTGCCCGATCTGGTGCGCTACATCGAAGACCGCGACCTC TGGAACTGGAAGTACCCTGAAACCGCCGGTTACGTCGCCGCGCTGGACATGGAGCCGTTCGACTTCGCGCGCTGGGACGC CATCGCCCGTTTCACGCCGGACCAGACGCAGGCCTTCGTCGCGCGCGGCGAGGCCATGGACGAGAAGTTCCGCCACCTCG CGGCAGATGTCGCGGGCGGCGCGCAGCCGCTGGTGTTCGACGGCGAACAGGGCCTGATGGTCAATGCGCCGGGCGCCTTC CACAGCCTGATCGGCGAGATGCTCTCCCAGCAGTCCGGCACCTTCGCGCTGATGTGGGTGCTGGGCAAGGACGGGCAGGT CAAGGTCGGCCTGCGCTCGCAGCGCGGCTACGACTGCTCGGTGCTCGCCACCCGCATGGGCGGCGGCGGCCATGCGCAGG CCTGCGGATTCCGCATGGGGCGGGATCGGTTGCCGGAATTGCTGACTGGCGTGTTCCAGTCCAGTGCGCCGGCACAGGGC TGA
Upstream 100 bases:
>100_bases CAGGGCGGGGCGGCACCGGATGCCTGCCCCGCCGATTGCGCCATTGTTCCGCGCCGCGCGCGAGCGCGCCAGCCCCGATG TCGCCGACAATCGCGCCCCT
Downstream 100 bases:
>100_bases GGCACGGCGCCGCCACGGTTCCGTGGCCGGGCCCGGGCGCGTCTTTCACGCCAGCCGCAGGTCCTTCGGTTTCGCTCCCG GGAACACCCGGGCGAGCGCG
Product: phosphoesterase, DHHA1
Products: NA
Alternate protein names: DHH Family Phosphohydrolase; DHH Superfamily Phosphohydrolase
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MTTTTTSAPAIARTLLPQTLLMAPSPDDPSPLVLYHGRCADGFGAALAAWRYYGGEVECVGLSHGQAKSVDDLPPLEGRY VYILDFSFPPDLLRAIDERAARLVMLDHHKSAAEQLTGFACRCGVVHFDMDKSGARLAWDFFHAETPLPDLVRYIEDRDL WNWKYPETAGYVAALDMEPFDFARWDAIARFTPDQTQAFVARGEAMDEKFRHLAADVAGGAQPLVFDGEQGLMVNAPGAF HSLIGEMLSQQSGTFALMWVLGKDGQVKVGLRSQRGYDCSVLATRMGGGGHAQACGFRMGRDRLPELLTGVFQSSAPAQG
Sequences:
>Translated_320_residues MTTTTTSAPAIARTLLPQTLLMAPSPDDPSPLVLYHGRCADGFGAALAAWRYYGGEVECVGLSHGQAKSVDDLPPLEGRY VYILDFSFPPDLLRAIDERAARLVMLDHHKSAAEQLTGFACRCGVVHFDMDKSGARLAWDFFHAETPLPDLVRYIEDRDL WNWKYPETAGYVAALDMEPFDFARWDAIARFTPDQTQAFVARGEAMDEKFRHLAADVAGGAQPLVFDGEQGLMVNAPGAF HSLIGEMLSQQSGTFALMWVLGKDGQVKVGLRSQRGYDCSVLATRMGGGGHAQACGFRMGRDRLPELLTGVFQSSAPAQG >Mature_319_residues TTTTTSAPAIARTLLPQTLLMAPSPDDPSPLVLYHGRCADGFGAALAAWRYYGGEVECVGLSHGQAKSVDDLPPLEGRYV YILDFSFPPDLLRAIDERAARLVMLDHHKSAAEQLTGFACRCGVVHFDMDKSGARLAWDFFHAETPLPDLVRYIEDRDLW NWKYPETAGYVAALDMEPFDFARWDAIARFTPDQTQAFVARGEAMDEKFRHLAADVAGGAQPLVFDGEQGLMVNAPGAFH SLIGEMLSQQSGTFALMWVLGKDGQVKVGLRSQRGYDCSVLATRMGGGGHAQACGFRMGRDRLPELLTGVFQSSAPAQG
Specific function: Unknown
COG id: COG2404
COG function: function code R; Predicted phosphohydrolase (DHH superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34920; Mature: 34789
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTTTSAPAIARTLLPQTLLMAPSPDDPSPLVLYHGRCADGFGAALAAWRYYGGEVECV CCCCCCCCHHHHHHHHHHHEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEE GLSHGQAKSVDDLPPLEGRYVYILDFSFPPDLLRAIDERAARLVMLDHHKSAAEQLTGFA ECCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHEEEEEECCHHHHHHHHCCE CRCGVVHFDMDKSGARLAWDFFHAETPLPDLVRYIEDRDLWNWKYPETAGYVAALDMEPF EEEEEEEEECCCCCCEEEEEEHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCC DFARWDAIARFTPDQTQAFVARGEAMDEKFRHLAADVAGGAQPLVFDGEQGLMVNAPGAF CHHHHHHHEECCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEECCHHH HSLIGEMLSQQSGTFALMWVLGKDGQVKVGLRSQRGYDCSVLATRMGGGGHAQACGFRMG HHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHCC RDRLPELLTGVFQSSAPAQG HHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TTTTTSAPAIARTLLPQTLLMAPSPDDPSPLVLYHGRCADGFGAALAAWRYYGGEVECV CCCCCCCHHHHHHHHHHHEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEE GLSHGQAKSVDDLPPLEGRYVYILDFSFPPDLLRAIDERAARLVMLDHHKSAAEQLTGFA ECCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHEEEEEECCHHHHHHHHCCE CRCGVVHFDMDKSGARLAWDFFHAETPLPDLVRYIEDRDLWNWKYPETAGYVAALDMEPF EEEEEEEEECCCCCCEEEEEEHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCC DFARWDAIARFTPDQTQAFVARGEAMDEKFRHLAADVAGGAQPLVFDGEQGLMVNAPGAF CHHHHHHHEECCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEECCHHH HSLIGEMLSQQSGTFALMWVLGKDGQVKVGLRSQRGYDCSVLATRMGGGGHAQACGFRMG HHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHCC RDRLPELLTGVFQSSAPAQG HHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA