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The map label for this gene is ytfQ [H]

Identifier: 120610929

GI number: 120610929

Start: 2481139

End: 2482107

Strand: Reverse

Name: ytfQ [H]

Synonym: Aave_2255

Alternate gene names: 120610929

Gene position: 2482107-2481139 (Counterclockwise)

Preceding gene: 120610930

Following gene: 120610928

Centisome position: 46.37

GC content: 65.74

Gene sequence:

>969_bases
ATGACGAAACTGACCCGACGCACGCTGGCCACGGCCCTGGCCTGCGCGCCCGTGGCCGCCCTGCTGCCCGCGGCCGCGTG
GGCGCAAAAGCCCATCGTGCTGGGCTTCAGCCAGGTCGGCGCGGAGAGCGAGTGGCGCACCGCGAACACCGAATCGATCA
AGTCGGCGGCCAGGGACGCCGGGATCGAGCTGAAGTTCTCCGACGCGCAGCAGAAGCAGGAGAACCAGATCAAGGCCATC
CGCTCCTTCATCGCCCAGCGCGTGGACGTGATCGCGTTCTCGCCCGTCGTGGAATCGGGCTGGGAGCCGGTGCTGCGCGA
GGCCAAGGCCGCGAAGATCCCCGTGGTGCTCACCGACCGCGCCGTCAACACCAAGGACACGTCGCTCTACGTCACCTTCA
TGGGCTCTGACTTCGTGGAAGAAGGCCGCAAGGCCGGCCGCTGGCTGGTCGAGAAGATGAAGGACGCCAAGGGCGACGTG
AACATCGTCGAGCTGCAGGGCACCGTGGGCTCGGCCCCGGCCATCGACCGCAAGAAGGGCTTCGAGGAAGTCGTGAAGGC
CGACCCGAAGTTCAAGATCATCCGCTCGCAGACCGGCGACTTCACCCGCGCCAAGGGCAAGGAAGTGATGGAAGCCTTCC
TGAAGGCCGAGGGCAGGAAGATCAACGTGCTCTACGCGCACAACGACGACATGGCCATCGGCGCGATCCAGGCCATCGAG
GAGGCCGGCCTCAAGCCCGGCAAGGACATCACCATCATCTCCATCGATGCCGTCAAGGGCGCGTTCGAGGCCATGATGGC
CGGCAAGCTCAACGTGACCGTGGAATGCAGCCCCCTGCTGGGCCCGCAGCTGATGGCGGCCGTCAAGGACATCAAGGCCG
GCAAGACGGTGCCCAAGCGCATCGTGACGGAAGAAGGCATCTTCCCGATGGAGACCGCGGCCCAGGAATTCCCCAAGCGC
AAGTACTGA

Upstream 100 bases:

>100_bases
CCTCCACGCCGCGGAGTTCCACACCACGGTCCGCACGGGCTACATGCTGGCCTGAAGCCCCCCTTTCTCTTCATCCCGAC
CATAAACACAGGAGACAACG

Downstream 100 bases:

>100_bases
CTCCCCCTCCCCCTCTCGCACAGCGATAAAAACCAGGAGACTCCCGTGAAGCGAACCTTTCTGAAAACCACTGCCACCGC
CCTCGCCCTGGCCGCCCTCG

Product: periplasmic-binding protein/LacI transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MTKLTRRTLATALACAPVAALLPAAAWAQKPIVLGFSQVGAESEWRTANTESIKSAARDAGIELKFSDAQQKQENQIKAI
RSFIAQRVDVIAFSPVVESGWEPVLREAKAAKIPVVLTDRAVNTKDTSLYVTFMGSDFVEEGRKAGRWLVEKMKDAKGDV
NIVELQGTVGSAPAIDRKKGFEEVVKADPKFKIIRSQTGDFTRAKGKEVMEAFLKAEGRKINVLYAHNDDMAIGAIQAIE
EAGLKPGKDITIISIDAVKGAFEAMMAGKLNVTVECSPLLGPQLMAAVKDIKAGKTVPKRIVTEEGIFPMETAAQEFPKR
KY

Sequences:

>Translated_322_residues
MTKLTRRTLATALACAPVAALLPAAAWAQKPIVLGFSQVGAESEWRTANTESIKSAARDAGIELKFSDAQQKQENQIKAI
RSFIAQRVDVIAFSPVVESGWEPVLREAKAAKIPVVLTDRAVNTKDTSLYVTFMGSDFVEEGRKAGRWLVEKMKDAKGDV
NIVELQGTVGSAPAIDRKKGFEEVVKADPKFKIIRSQTGDFTRAKGKEVMEAFLKAEGRKINVLYAHNDDMAIGAIQAIE
EAGLKPGKDITIISIDAVKGAFEAMMAGKLNVTVECSPLLGPQLMAAVKDIKAGKTVPKRIVTEEGIFPMETAAQEFPKR
KY
>Mature_321_residues
TKLTRRTLATALACAPVAALLPAAAWAQKPIVLGFSQVGAESEWRTANTESIKSAARDAGIELKFSDAQQKQENQIKAIR
SFIAQRVDVIAFSPVVESGWEPVLREAKAAKIPVVLTDRAVNTKDTSLYVTFMGSDFVEEGRKAGRWLVEKMKDAKGDVN
IVELQGTVGSAPAIDRKKGFEEVVKADPKFKIIRSQTGDFTRAKGKEVMEAFLKAEGRKINVLYAHNDDMAIGAIQAIEE
AGLKPGKDITIISIDAVKGAFEAMMAGKLNVTVECSPLLGPQLMAAVKDIKAGKTVPKRIVTEEGIFPMETAAQEFPKRK
Y

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790674, Length=294, Percent_Identity=54.7619047619048, Blast_Score=312, Evalue=2e-86,
Organism=Escherichia coli, GI1790192, Length=275, Percent_Identity=26.5454545454545, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1790526, Length=260, Percent_Identity=28.4615384615385, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788898, Length=189, Percent_Identity=25.9259259259259, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 34978; Mature: 34847

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLTRRTLATALACAPVAALLPAAAWAQKPIVLGFSQVGAESEWRTANTESIKSAARDA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCHHHHHHHHHHC
GIELKFSDAQQKQENQIKAIRSFIAQRVDVIAFSPVVESGWEPVLREAKAAKIPVVLTDR
CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHEECHHHHCCCHHHHHHHHHCCCCEEEECC
AVNTKDTSLYVTFMGSDFVEEGRKAGRWLVEKMKDAKGDVNIVELQGTVGSAPAIDRKKG
CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHCC
FEEVVKADPKFKIIRSQTGDFTRAKGKEVMEAFLKAEGRKINVLYAHNDDMAIGAIQAIE
HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHH
EAGLKPGKDITIISIDAVKGAFEAMMAGKLNVTVECSPLLGPQLMAAVKDIKAGKTVPKR
HHCCCCCCCEEEEEEHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHH
IVTEEGIFPMETAAQEFPKRKY
HHHCCCCCCHHHHHHHCCCCCC
>Mature Secondary Structure 
TKLTRRTLATALACAPVAALLPAAAWAQKPIVLGFSQVGAESEWRTANTESIKSAARDA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCHHHHHHHHHHC
GIELKFSDAQQKQENQIKAIRSFIAQRVDVIAFSPVVESGWEPVLREAKAAKIPVVLTDR
CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHEECHHHHCCCHHHHHHHHHCCCCEEEECC
AVNTKDTSLYVTFMGSDFVEEGRKAGRWLVEKMKDAKGDVNIVELQGTVGSAPAIDRKKG
CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHCC
FEEVVKADPKFKIIRSQTGDFTRAKGKEVMEAFLKAEGRKINVLYAHNDDMAIGAIQAIE
HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHH
EAGLKPGKDITIISIDAVKGAFEAMMAGKLNVTVECSPLLGPQLMAAVKDIKAGKTVPKR
HHCCCCCCCEEEEEEHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHH
IVTEEGIFPMETAAQEFPKRKY
HHHCCCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 9298646 [H]