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The map label for this gene is chvE [H]

Identifier: 120610928

GI number: 120610928

Start: 2480023

End: 2481093

Strand: Reverse

Name: chvE [H]

Synonym: Aave_2254

Alternate gene names: 120610928

Gene position: 2481093-2480023 (Counterclockwise)

Preceding gene: 120610929

Following gene: 120610927

Centisome position: 46.35

GC content: 64.15

Gene sequence:

>1071_bases
GTGAAGCGAACCTTTCTGAAAACCACTGCCACCGCCCTCGCCCTGGCCGCCCTCGGCACCCTGCCGCTGGCGCATGCCGC
GGACAAGGGCAGCATCGGCATTTCCATGCCCACCAAGTCCTCGGCCCGCTGGATCGCGGACGGCGACAACATGGCCCGGG
TGCTCAAGGAGCGCGGCTACAAGACCGACCTGCAGTACGCGGAAGACGACATCCCCAACCAGCTCGCCCAGATCGAGAAC
ATGGTGACCAAGGGCGCGAAGGTGCTCGTGATCGCCTCCATCGACGGCACCACGCTCTCGCGCGTGCTGCAGAGCGCGGC
GGACAAGGGCGTGAAGGTCATCGCCTACGACCGCCTCATCAAGGGTTCGAAGAACGTCGATTACTACGCCACCTTCGACA
ACTTCCAGGTCGGGGTGCTGCAGGCGCAGTCCATCGTGGACAAGCTGGGCCTCAAGCAGGGCAAGGGCCCGTTCAACATC
GAACTCTTCGGCGGCTCGCCCGACGACAACAACGCCTTCTTCTTCTACGACGGCGCGATGAGCGTGCTGCAGCCCTACAT
CGACAGCGGCAAGCTGGTGGTGCGCAGCAAGCAGACCGGGATGAACAAGGTCGGCACCCTGCGCTGGGACGGCGCGACCG
CCCAGGCCCGCATGGACAACCTGCTCTCGGCCTACTACGGCAAGGAGAAGGTGGACGCGGTGCTTTCGCCGTACGACGGG
ATCTCCATCGGCATCCTTTCGTCGCTCAAGGGCGTGGGCTACTGCACCGCCCAGCAGCCCTGCCCGATCGTGACCGGCCA
GGACGCCGAGGTGCCTTCGGTCAAGTCCATCCTGAAGGGCGAGCAGACATCCACCGTGTTCAAGGACACGCGTGAGCTCG
CCAAGGTGGCGGCCGACATGGTGGACGCGGTGCTGTCGGGCAAGCAGCCCGAGATCAACGACACCAAGACCTACAACAAC
GGCGTGAAGGTCGTGCCCTCCCACCTGCTCAAGCCGGTGCTGGTGGACCAGTCGAACTGGAAGAAGGTGCTGGTGGACAG
CGGCTACTACAAGGAATCGCAGATCAAGTGA

Upstream 100 bases:

>100_bases
AGGCATCTTCCCGATGGAGACCGCGGCCCAGGAATTCCCCAAGCGCAAGTACTGACTCCCCCTCCCCCTCTCGCACAGCG
ATAAAAACCAGGAGACTCCC

Downstream 100 bases:

>100_bases
TCCGCCGCGCGCGGCCCGCCGCGGGCCGCGCTTCCCGAGCCATATGCCGCCGCCCCGGGCCTTGCAGGCCGGGCGCGGGG
GCACGCCAGCGACGCCAACG

Product: sugar ABC transporter periplasmic sugar-binding protein

Products: ADP; phosphate; xylose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MKRTFLKTTATALALAALGTLPLAHAADKGSIGISMPTKSSARWIADGDNMARVLKERGYKTDLQYAEDDIPNQLAQIEN
MVTKGAKVLVIASIDGTTLSRVLQSAADKGVKVIAYDRLIKGSKNVDYYATFDNFQVGVLQAQSIVDKLGLKQGKGPFNI
ELFGGSPDDNNAFFFYDGAMSVLQPYIDSGKLVVRSKQTGMNKVGTLRWDGATAQARMDNLLSAYYGKEKVDAVLSPYDG
ISIGILSSLKGVGYCTAQQPCPIVTGQDAEVPSVKSILKGEQTSTVFKDTRELAKVAADMVDAVLSGKQPEINDTKTYNN
GVKVVPSHLLKPVLVDQSNWKKVLVDSGYYKESQIK

Sequences:

>Translated_356_residues
MKRTFLKTTATALALAALGTLPLAHAADKGSIGISMPTKSSARWIADGDNMARVLKERGYKTDLQYAEDDIPNQLAQIEN
MVTKGAKVLVIASIDGTTLSRVLQSAADKGVKVIAYDRLIKGSKNVDYYATFDNFQVGVLQAQSIVDKLGLKQGKGPFNI
ELFGGSPDDNNAFFFYDGAMSVLQPYIDSGKLVVRSKQTGMNKVGTLRWDGATAQARMDNLLSAYYGKEKVDAVLSPYDG
ISIGILSSLKGVGYCTAQQPCPIVTGQDAEVPSVKSILKGEQTSTVFKDTRELAKVAADMVDAVLSGKQPEINDTKTYNN
GVKVVPSHLLKPVLVDQSNWKKVLVDSGYYKESQIK
>Mature_356_residues
MKRTFLKTTATALALAALGTLPLAHAADKGSIGISMPTKSSARWIADGDNMARVLKERGYKTDLQYAEDDIPNQLAQIEN
MVTKGAKVLVIASIDGTTLSRVLQSAADKGVKVIAYDRLIKGSKNVDYYATFDNFQVGVLQAQSIVDKLGLKQGKGPFNI
ELFGGSPDDNNAFFFYDGAMSVLQPYIDSGKLVVRSKQTGMNKVGTLRWDGATAQARMDNLLSAYYGKEKVDAVLSPYDG
ISIGILSSLKGVGYCTAQQPCPIVTGQDAEVPSVKSILKGEQTSTVFKDTRELAKVAADMVDAVLSGKQPEINDTKTYNN
GVKVVPSHLLKPVLVDQSNWKKVLVDSGYYKESQIK

Specific function: Required for effective transcriptional induction of the vir genes by monosaccharides in response to plant signals and for normal growth and chemotaxis towards certain sugars. Function as a periplasmic multiple sugar-binding receptor protein. It does not i

COG id: COG4213

COG function: function code G; ABC-type xylose transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1789990, Length=332, Percent_Identity=37.9518072289157, Blast_Score=189, Evalue=2e-49,

Paralogues:

None

Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 38460; Mature: 38460

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTFLKTTATALALAALGTLPLAHAADKGSIGISMPTKSSARWIADGDNMARVLKERGY
CCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEECCCCCCCEEEECCHHHHHHHHHCCC
KTDLQYAEDDIPNQLAQIENMVTKGAKVLVIASIDGTTLSRVLQSAADKGVKVIAYDRLI
CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEHHHH
KGSKNVDYYATFDNFQVGVLQAQSIVDKLGLKQGKGPFNIELFGGSPDDNNAFFFYDGAM
CCCCCCEEEEECCCCEEEHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEECCHH
SVLQPYIDSGKLVVRSKQTGMNKVGTLRWDGATAQARMDNLLSAYYGKEKVDAVLSPYDG
HHHHHHHCCCCEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHCHHHHHHHHCCCCC
ISIGILSSLKGVGYCTAQQPCPIVTGQDAEVPSVKSILKGEQTSTVFKDTRELAKVAADM
CHHHHHHHHCCCEEECCCCCCCEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VDAVLSGKQPEINDTKTYNNGVKVVPSHLLKPVLVDQSNWKKVLVDSGYYKESQIK
HHHHHCCCCCCCCCCCCCCCCCEECHHHHCCCEEECCCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MKRTFLKTTATALALAALGTLPLAHAADKGSIGISMPTKSSARWIADGDNMARVLKERGY
CCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEECCCCCCCEEEECCHHHHHHHHHCCC
KTDLQYAEDDIPNQLAQIENMVTKGAKVLVIASIDGTTLSRVLQSAADKGVKVIAYDRLI
CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEHHHH
KGSKNVDYYATFDNFQVGVLQAQSIVDKLGLKQGKGPFNIELFGGSPDDNNAFFFYDGAM
CCCCCCEEEEECCCCEEEHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEECCHH
SVLQPYIDSGKLVVRSKQTGMNKVGTLRWDGATAQARMDNLLSAYYGKEKVDAVLSPYDG
HHHHHHHCCCCEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHCHHHHHHHHCCCCC
ISIGILSSLKGVGYCTAQQPCPIVTGQDAEVPSVKSILKGEQTSTVFKDTRELAKVAADM
CHHHHHHHHCCCEEECCCCCCCEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VDAVLSGKQPEINDTKTYNNGVKVVPSHLLKPVLVDQSNWKKVLVDSGYYKESQIK
HHHHHCCCCCCCCCCCCCCCCCEECHHHHCCCEEECCCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; xylose [Periplasm]; H2O [C]

Specific reaction: ATP + xylose [Periplasm] + H2O = ADP + phosphate + xylose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8253785; 2156804; 11743193; 11743194 [H]